prot_H-elongata_contig11531.1216.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11531.1216.1
Unique Nameprot_H-elongata_contig11531.1216.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length874
Homology
BLAST of mRNA_H-elongata_contig11531.1216.1 vs. uniprot
Match: D7FMH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH0_ECTSI)

HSP 1 Score: 517 bits (1332), Expect = 3.600e-161
Identity = 425/1054 (40.32%), Postives = 535/1054 (50.76%), Query Frame = 0
Query:   10 STGRGILSTGDILIEVNGRPVAGPAARRAGILSFQDAIEAVAAAAKTE----------EGGNGRGSRNFKFRRVGRSSPPSI---------PLDPT------------SFALLPSKTLLTGESGSGLSGEDATDEKRGSGNSAEASDRSNRSGFGVG------LQLKDSGRSM--------DSTVRVSGTTRGGSGWKPILSSRSTTSLGTS---DG----SSGESRKAGRRKK------------------------KARVAGKNFGVVLTTLSAVERIKKEARRAEASLKPWVCPRQCLIQQVLENSDLLRPVVIQLTNLSYWYQQRRLLGGSRHMHRKTDFKSTTKRWEASIYILRGRPSDGKLIPILTPSGIPTGTVFRSEGQALAQASKSAQERDANPCACRGSKPKGITPSTMLQTHIAILVVSEIFKGLCNADRLAIVFTTLFDGLVAEADDFSATP----NAAAKPQRSGLSRPPS----------------PERGEGRERETKTIHAADQ---SRTSVNSGSQMSRRWNKNEAESLPN---------------RSGA--------GGRTTNSSTDVFDTGTADAAA------------------EGGRNESVGTYPGRVVRGGVKASFVGANVRALPVWGGLAPIAGTSLLIECRTPAQWQPKKFQPTGQ-----------------------------ELWGPARSGHTTLANDPRVNDASISKSLELIVAESKVLRETAPKFEHFDRFAQEANGGSPTRQASRKHLRPANDGTNSSRRLLRHNAQDDESFGVKSDRGGGGRTLPHFFHGLGIHTRRLLLKLHAENHSRLLA---RKPSPNSSTVALRGGIVNTQSRP---------STLSPGSLRSIK-----------PPQSTGLIPHSIEDALSAGRISARSGSLSAAPTRMRDAASAFAVFEPPPDVDAAVLDQHSVLLARLTEAVTRIQRIRRIGAFPRAARRMRRRQRAALFVERVFRGHLGRRYAAIWKVVAYLASTRISAEWRRFETRRTFLVIRARSRAGATCLQ 871
            + GR IL  GDIL+EVNG PVAG AAR AGI+SF+DA+  VAAA              +    +  R  KFRR GR   PS          P DP+            S     S   +T +  +GLS   A   +    N A++S+                LQ+K  G+          D     S     G G  P+ SSRS  S  +S   DG    SS  SR + R K                         K R AG   G   +T S  ERIK EARR EA L+P VCPRQ L++ +LE S+ L+P+ ++LTNLSYWYQQRRLLGG+RHMHR   F   TKRWEAS+Y+L  RPSDGKL+PILTP     GT   ++GQALA A+KSA+ERDANP A RG KP G+T  TMLQTHI+ILVVS+ F GL +ADRLA+VFTTL + L A A    + P    NA + P  S  + P S                P+  EG  R+      AD    +R  V+  S      +K  A   P+                 G+        GGR   S+      GTA  ++                  +G R +       RV+RG VKASFVG NV  LPVWG L  IAG+SLL++CRTPAQW+ + F PT Q                             ELWGPARSGH TLAN+PRV + ++  ++E I+AESK LRE APKFEHFDRF  E+NG +   + +    + +   ++ +      N         K+     GRT PHFFHGLG + R+L ++L+ EN SRLLA   R+ +  +  VA  G  ++    P         +T   GS  SI            PP+  G  P S+  + +A                +R AA AFA   PPPD+DA VLD++ VLL RL EA TRIQR RR+G  PRAARR+ RRQRA L V+RVFRGHLGR YA++WKVVA LA+TR+SA WRRF T+R FL  RAR+RAGA  LQ
Sbjct:  217 AAGREILRPGDILVEVNGMPVAGDAARDAGIVSFEDAVGVVAAATAARSPTPEAHGQLDAAARQRPRVLKFRREGRGQRPSSASVTLLLPSPRDPSKGGWVNGIPGGGSAGSRSSSGTVTEQDTTGLSSRSAHGLESKISNPADSSEXXXXXXXXXXXXLHPVLQVKGVGQVPHMAAGDPGDKNTAGSWIGEKGMGEIPLASSRSRASDASSVDMDGLSALSSLRSRSSVRSKGSESSFNSRATSKTGGVPRSRKRGGKERQAGGRSGAFQST-STAERIKAEARRGEALLEPLVCPRQQLLKNILETSETLQPLAVRLTNLSYWYQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKS-VGTTISTKGQALAIAAKSAKERDANPGAVRGPKPPGMTQLTMLQTHISILVVSDAFTGLSHADRLALVFTTLHNELAASARPPPSLPDNSTNAFSSPLPSSNTPPSSLLSPATKAKKTATALTPDSVEGGRRDPSVADEADDRSNARRGVSVQSPGYHDESKRAAAGRPHSIRVVAAGGERQVGEEKGSXXXXXXXXGGRNDVSNGGRLPVGTASPSSVHPIIPIGDINSQEERRKDGDRRQR---RRHRVIRGNVKASFVGQNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETFPPTQQDRCLVHRQGPGALYVHSRSHINEKEERFEELWGPARSGHRTLANNPRVKEGAVRSTMERIIAESKALREAAPKFEHFDRFG-ESNGDADQTKGNPPPPKKSGGESHGAGHQPNTNPSVATPAATKA-----GRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSADVAGPVASSGRHLSAAPAPPDGTSLPSPTTARNGSQLSISRQQQQQLHEKTPPREEGKSPRSVSGSFAAXXXXXXXXXXX---ENVRHAAGAFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRERRLGGLPRAARRLWRRQRAVLAVQRVFRGHLGRSYASMWKVVAVLAATRLSAGWRRFSTQRKFLAFRARARAGAIGLQ 1256          
BLAST of mRNA_H-elongata_contig11531.1216.1 vs. uniprot
Match: A0A6H5KC52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC52_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 5.350e-134
Identity = 397/1013 (39.19%), Postives = 502/1013 (49.56%), Query Frame = 0
Query:   10 STGRGILSTGDILIEVNGRPVAGPAARRAGILSFQDAIEAVAAAAKT-----EEGGNGRGSRN------FKFRRVGRSSPPSIPLDPTSFALLPSKTLLT-GESGSGLSGEDATDEKRGSGNSAE--ASDRSNRSGFGVGL---------------------------QLKDSGRSMDSTVRVSGTTRGGSGWK--------PILSSRSTTSLGTS---DGSSGESRKAGRRKKKARVAGKNFGVVLTTLSA-VERIKKEA-RRAEASLKPWVCPRQCLIQQVLENSDLLRPVVIQLTNLSYWYQQRRLLGGSRHMHRKTDFKSTTKRWEASIYILRGRPSDGKLIPILTPSGIPTGTVFRSEGQALAQASKSAQERDANPCACRGSKPKGITPSTMLQTHIAILVVSEIFKGLCNADRLAIVFTTLFDGLVAEADD-----------------FSATPNAAAKPQRSGLSRPPSPERGEGRERETKTIHAADQSRTSVNSGSQMSRRWNKNEAESLPNRSGAGGR------TTNSSTDVFDTGTADAAA------------EGGRNE-------SVGT------YP------------------------GRVVRGGVKASFVGANVRALPVWGGLAPIAGTSLLIECRTPAQWQPKKFQPTGQELWGPARSGHTTLANDPRVNDASISKSLELIVAESKVLRETAPKFEHFDRFAQEANGGSPTRQASRKHLRPANDGTNSSRRLLRHNAQDDESFGVKSDRGGGGRTLPHFFHGLGIHTRRLLLKLHAENHSRLLA---RKPSPNSSTVALRGGIV---------NTQSRPSTLSPGSLRSIKPPQSTGLIPHSIEDALSAGRI-SARSGSLSAAPTRMRDAASA-----------FAVFEPPPDVDAAVLDQHSVLLARLTEAVTRIQRIRRIGAFPRAARRMRRRQRAALFVERVFRGHLGRRYAAIWKVVAYLASTRISAEWRRFETRRTFLVIRARSRAGATCLQV 872
            + GR IL  GDIL+EVNG PVAG AAR AGI+SF+DA+  VAAA        E  G  R +         KFRR GR   PS   D     LLPS    + G   +G+ G  +   +  SG   E   +D S+RS  G+                             Q+K  G+         G      GW         P+ SSRS  S  +S   DG S  S    R   +++ +  +F    T+ +  V R +K   +  +A  +  V       +++   +                YQQRRLLGG+RHMHR   F   TKRWEAS+Y+L  RPSDGKL+PILTP     GT   ++GQALA A+KSA+ERDANP A RG KP  +T  TML+THI+ILVVS+ F GL +ADRLA+VFTTL + L A A                   FS TP ++  PQ +   + P+    +  E        AD +    N+   +S +   +  ES  NR+GAG        T   S  V   G                  EGGRN+        VGT      +P                         RV+RG VKASFVG NV  LPVWG L  IAG+SLL++CRTPAQW+ + + PT QELWG ARSGH TLAN PRV +  +  ++E I+AESKVLRE APKFEHFDRF  E+NG +   Q       P   G  S     + N     +    +     GRT PHFFHGLG + R+L ++L+ EN SRLLA   R+ +  +  VA  G  +          +   P+T   GS  SI   Q                ++ S RS S S A                     FA   PPPD+DA VLD++ VLL RL EA TRIQR+RR+G  PRAARR+RRRQRA L V+RVFRGHLGRRYA++WKVVA LA+TR+SA WRRF  +R FL  RAR+RAGA  LQV
Sbjct:  299 AAGREILRPGDILVEVNGMPVAGAAARDAGIVSFEDAVGVVAAATAARSPAPEAHGQQRDAAARQRPLVLKFRREGRGQRPSSASDTL---LLPSPRYPSKGGWVNGIPGGGSAGSRSSSGTVTEQDTTDSSSRSARGLETKICDPAXXXXXXXXXXXXXXXXXXXXPQVKGVGQVPHMAAGDPGDKNTPGGWIGEMGRGEIPLASSRSRASGASSVDMDGLSALSSLRSRSSARSKGSESSFNSRATSKTGGVPRSRKRGGKERQAGGRSGVFQSTSTAERIKAEAR---------------YQQRRLLGGARHMHRGAVFDPRTKRWEASVYMLGDRPSDGKLVPILTPIKS-VGTTVLTKGQALALAAKSAKERDANPGAVRGPKPPMMTQLTMLETHISILVVSDAFTGLSHADRLALVFTTLHNELAASAHPPPSLPDVRTNAFSSPLPFSNTPPSSLLPQATKAKKTPTALAPDAVEEGRGDHSVADGTDGRPNARRGVSVQSPGHHDES--NRAGAGRPHGVAVGTGEKSERVVAAGXXXXXXXXXXXXXXXXIEEGGRNDVSNGRGLPVGTASLSSVHPVIPTGGINSQEERGKDGDQRQRRRHRVIRGNVKASFVGPNVEGLPVWGALDAIAGSSLLVDCRTPAQWRAETYPPTEQELWGAARSGHRTLANHPRVKEGIVKSTMERIIAESKVLREAAPKFEHFDRFG-ESNGDAD--QTKGNPPPPTTSGGQSDGAGHQPNTNPAVAAPAATK---AGRTHPHFFHGLGPNARKLFMELYTENRSRLLAPISRRSADVAGPVASSGRHLPVAPAPPDCTSLPSPTTARNGSQLSISWQQXXXXXXXXXXXXXXREKVKSPRSVSGSFAXXXXXXXXXXXXXXXXXXXXXFAASGPPPDLDAGVLDRYGVLLGRLVEAATRIQRVRRLGGLPRAARRLRRRQRAVLAVQRVFRGHLGRRYASMWKVVAVLAATRLSAGWRRFSAQRKFLAFRARARAGAIGLQV 1284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11531.1216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMH0_ECTSI3.600e-16140.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC52_9PHAE5.350e-13439.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11531contigH-elongata_contig11531:1336..6132 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11531.1216.1mRNA_H-elongata_contig11531.1216.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11531 1336..6132 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11531.1216.1 ID=prot_H-elongata_contig11531.1216.1|Name=mRNA_H-elongata_contig11531.1216.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=874bp
MEFGSTTAHSTGRGILSTGDILIEVNGRPVAGPAARRAGILSFQDAIEAV
AAAAKTEEGGNGRGSRNFKFRRVGRSSPPSIPLDPTSFALLPSKTLLTGE
SGSGLSGEDATDEKRGSGNSAEASDRSNRSGFGVGLQLKDSGRSMDSTVR
VSGTTRGGSGWKPILSSRSTTSLGTSDGSSGESRKAGRRKKKARVAGKNF
GVVLTTLSAVERIKKEARRAEASLKPWVCPRQCLIQQVLENSDLLRPVVI
QLTNLSYWYQQRRLLGGSRHMHRKTDFKSTTKRWEASIYILRGRPSDGKL
IPILTPSGIPTGTVFRSEGQALAQASKSAQERDANPCACRGSKPKGITPS
TMLQTHIAILVVSEIFKGLCNADRLAIVFTTLFDGLVAEADDFSATPNAA
AKPQRSGLSRPPSPERGEGRERETKTIHAADQSRTSVNSGSQMSRRWNKN
EAESLPNRSGAGGRTTNSSTDVFDTGTADAAAEGGRNESVGTYPGRVVRG
GVKASFVGANVRALPVWGGLAPIAGTSLLIECRTPAQWQPKKFQPTGQEL
WGPARSGHTTLANDPRVNDASISKSLELIVAESKVLRETAPKFEHFDRFA
QEANGGSPTRQASRKHLRPANDGTNSSRRLLRHNAQDDESFGVKSDRGGG
GRTLPHFFHGLGIHTRRLLLKLHAENHSRLLARKPSPNSSTVALRGGIVN
TQSRPSTLSPGSLRSIKPPQSTGLIPHSIEDALSAGRISARSGSLSAAPT
RMRDAASAFAVFEPPPDVDAAVLDQHSVLLARLTEAVTRIQRIRRIGAFP
RAARRMRRRQRAALFVERVFRGHLGRRYAAIWKVVAYLASTRISAEWRRF
ETRRTFLVIRARSRAGATCLQVIF
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