mRNA_H-elongata_contig1153.1215.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A6H5JH04_9PHAE (CYTOSOL_AP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH04_9PHAE) HSP 1 Score: 323 bits (829), Expect = 3.630e-98 Identity = 207/439 (47.15%), Postives = 258/439 (58.77%), Query Frame = 2
Query: 20 VGRTSRAACAAAVVLLPGAMSMSMPLLRAGTGC------LNLVPRASRGRSGSAAQLSRHAVAL-GNNSTYSRRAPYLH--------GRRHRALAMVGGGGSXXXXXXXXXGALGDSPPATYDFAKRATRFEACFTDAEAGVDVEGGIGRKAIPITLLPDK-------------EG--------FAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTWTPAKSNGSGNLPKV 1228
+ + S AACAA V LLPGAMS L AG G + ++ HA ++ G N RA H G R LAMV G G + YDFAKRATRFE+ F + ++ ++A+P+T+LPDK EG F +WLGS+ P+++SWIK+LGQDSH GR++LVPS+ G G + E++ L+EVAFCLGE G+DSA SPFSLCSLR++LPAG Y LR A G + EP AALSWA+GGYSFDR+K G+G + G KE + +LAWP G ++A++ AAAASTFLVRDLI+TPCE MGP+HL+AV TSLAEEFG + V GD LLKEGDSYP +HAVGRAAGVGREPRLLDLTW P S+ +LPKV
Sbjct: 21 ISKRSTAACAA-VALLPGAMSF---LRAAGLGVGGXXXXXXXXXXXXXXXRTTTSRFYAHAHSVSGANGGDGGRAQARHAGVALRWRGGGRRGLAMVAGEGGEG---------------SDYDFAKRATRFESSFAEGDSAS------AKRAVPVTVLPDKAREEEEGEGGXXGEGGVWWCLASFERWLGSQPPSSKSWIKALGQDSHTAGRLVLVPSSVGDRGGQEGEEVSLSEVAFCLGE-GDDSAGSPFSLCSLREKLPAGTYALRGADG-DVAEPDTAALSWAIGGYSFDRFKSKKGDGGEKG-------KEKEDSKV---------VLAWPA--GADKARVTAAAASTFLVRDLITTPCEHMGPQHLEAVFTSLAEEFGGTTKVVRGDELLKEGDSYPMVHAVGRAAGVGREPRLLDLTWAPPGSDAE-SLPKV 413
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: D7FXS8_ECTSI (Leucyl aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS8_ECTSI) HSP 1 Score: 264 bits (674), Expect = 6.570e-77 Identity = 142/261 (54.41%), Postives = 180/261 (68.97%), Query Frame = 2
Query: 446 LPDKEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTWTPAKSNGSGNLPKV 1228
+ K F +WLGS+ P+++SWIK+LGQDSH GR++LVPS+ G G + ++ L+EVAFCLGE G+DSA SPFSLCSLR++LP G Y LR A G + EP AALSWA+GGYSFDR+K G+G + E + + +LAWP G ++ ++ AAAASTFLVRDLI+TPCE MGP+ L+AV SLAEEFG + V GD LL+ G + +HAVGRAAGVGREPRLLDLTW PA S+ +LPKV
Sbjct: 47 MNSKASFERWLGSQPPSSKSWIKALGQDSHTAGRLVLVPSSVGDGGGQEGGEVSLSEVAFCLGE-GDDSAVSPFSLCSLREKLPTGTYALRGADG-DVAEPDTAALSWAIGGYSFDRFKSKKGDGGE----------------KDKEKEDRKVVLAWPA--GADKGRVTAAAASTFLVRDLITTPCEHMGPQQLEAVFASLAEEFGGTTKVVRGDELLEGGVT---VHAVGRAAGVGREPRLLDLTWAPAGSDAE-SLPKV 283
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A835Z391_9STRA (CYTOSOL_AP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z391_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.350e-61 Identity = 137/305 (44.92%), Postives = 168/305 (55.08%), Query Frame = 2
Query: 323 SPPAT---YDFAKRATRFEACFTDAEAGVDVEGGIGRKAIPITLLPDKEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASM---------AVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTW-TPAK 1198
SPP T Y+FA ATRF+ FT+ T K+ FA W G++ AA+ W K+ G DSH+ GR LVP+ G +G + L+ AFCL E+ +SPFSLCSL D LP G Y +GGPL P AAALSWA YS DRYK G AK A ++L WP +G ER + ++AAST+LVRDLISTP ED GP+HL+AV T LA++FG + V GD+LL+ D+Y IHAVGRAAG GREPRLLDLTW PAK
Sbjct: 3 SPPDTAGSYNFATEATRFKKFFTEDP----------------TNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDG------VGLSTAAFCL----EEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKG---------KGDGAKRAR------------RVLVWP--QGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLE--DNYKMIHAVGRAAGEGREPRLLDLTWGDPAK 256
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A835YM69_9STRA (Leucyl aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM69_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.850e-50 Identity = 128/301 (42.52%), Postives = 158/301 (52.49%), Query Frame = 2
Query: 326 PPATYDFAKRATRFEACFTDAEAGVDVEGGIGRKAIPITLLPDKEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTWTPAKSNGSGNLPKV 1228
P A + FA ATRF FT+ KA + +L KE F WL + R W K ++ GRV++VPS E + E A CL + AASPFSLC+L D LP G Y L G AAALSWALG Y + RYK +K A++S K L W G ++A ++AAAAST+LVRDLISTPCEDMGP HL+AV+ LA+EF ++ V GD LL++ +YP IHAVGRAA GREPRLLDLTW G + PKV
Sbjct: 2 PVALHSFAAEATRFSGLFTNDAT----------KATKVAVL-SKEDFTGWLEMQPALVRRWFKVNKLNTFSAGRVLVVPSFN-----EHVASDHVGEAACCL----DGEAASPFSLCALYDALPDGHYVLHGPKGQDYEYADAAALSWALGAYRYTRYK----------------SKPDAADSGG-------KRLVWAA--GCDKASVIAAAASTYLVRDLISTPCEDMGPHHLEAVVADLAKEFSGTLKVVKGDELLQQ--NYPMIHAVGRAAEPGREPRLLDLTW------GDESKPKV 249
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A7S2SSP6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP6_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.100e-34 Identity = 103/287 (35.89%), Postives = 143/287 (49.83%), Query Frame = 2
Query: 329 PATYDFAKRATRFEACFTDAEAGVDV-EGGIGRKAIPITLLPDKEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTW 1186
PA++ + RA R+ G V E G A+P+ +P+ + WL S+ P + W+++ + PG+++LVP+ S +A V F G+ +++A +S SL LP G Y L++ + P AAALSWALG YSFDRYK S S +L WP +G +R + +AA++T+L RDLISTP E GP L+ + LA GA + VGD LL G+ QIHAVGRAA R PRLLDLTW
Sbjct: 72 PASWSWLGRAVRW---------GERVKEPAQGTAAVPVLTVPEGQ-LDSWLESQTPHVQRWVQATNWKASAPGQLLLVPAEDSSS---------IAVVLFVAGKDEHENSAFRYS--SLAKDLPKGTYKLQDP-----VNPTAAALSWALGCYSFDRYK------------------------KGSPSHGTRPVLEWP--DGCDRGFVASAASATYLARDLISTPAEHCGPADLEDCMMQLASLHGAKASSIVGDALL--GNDCAQIHAVGRAATADRAPRLLDLTW 304
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A7S2UWS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS3_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.170e-34 Identity = 92/247 (37.25%), Postives = 131/247 (53.04%), Query Frame = 2
Query: 455 KEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPL---IEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTW 1186
K F + AA + LG + + G+V+ VP+ G EG + ++A V + +S F SL +LPAG Y L+ A+GG I AA+SWALG Y FD+YK + K+ + E E + K + WP G ++ K++ A+T+L+RDLISTPC+DMGP HLQ V+ +A GA + +GD LL++ +YPQIHAVGRAA R PRL+D+ W
Sbjct: 23 KSTFPSFKEGAGEAASGAMDFLGLEKFKDGKVVAVPALG-----EGGANEYIATVE-------QKDLSSRFGFSSLPSKLPAGTYMLKAAAGGEKDKEISAEKAAISWALGQYKFDKYK----------KTTSSTQKDESEEHK--EWRTKKTKMVWPA--GCDKDKVINEVAATYLIRDLISTPCDDMGPHHLQRVVEEIASTHGAEVNTIIGDELLEK--NYPQIHAVGRAADAERAPRLIDMRW 241
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A0G4EYC0_VITBC (CYTOSOL_AP domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EYC0_VITBC) HSP 1 Score: 140 bits (353), Expect = 1.480e-31 Identity = 104/299 (34.78%), Postives = 149/299 (49.83%), Query Frame = 2
Query: 350 KRATRFEACFTDAEAGVDVEGGIGRKAIPITLLPDKEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEP---GAAALSWALGGYSFDRYKGNNGNGN-QIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGAS-MAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTWTPAKSNGSGNLPKVI 1231
++A RF++ F + EA + G + P+ +L K F KWL + R W+KS + + G+++ +P+ G EGEEG F + +R SP++ SL LP Y LR G + P A LSW+LG Y ++RYK Q G+ K +L+ PV V+ + + ++VRDLI+TP ED+GP LQ + +LA E GAS + VGD+LLKE +YPQIHAVGRAA R PRLL+L WT +N S L ++
Sbjct: 70 EQAARFQSSFCE-EAALG-----GARPTPLLVLT-KSSFPKWLQEQSAERRGWLKSYDMEKFKAGKLLALPAERG-EGEEGGVPFMYV---FTVADR-----KSPYAYSSLPGSLPPATYALRFH--GEEVGPDDLSTAVLSWSLGAYKYERYKKKXXXXXXQQGVD-------------------KRPVLSLPVGFSVKGEGVGGLVEAIYMVRDLITTPAEDVGPAQLQECVEALARECGASSVRAIVGDDLLKE--NYPQIHAVGRAADPERSPRLLELCWTSPSANSSSPLVALV 329
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A211ZA43_9PROT (Leucyl aminopeptidase n=5 Tax=Bacteria TaxID=2 RepID=A0A211ZA43_9PROT) HSP 1 Score: 134 bits (336), Expect = 5.220e-30 Identity = 94/265 (35.47%), Postives = 131/265 (49.43%), Query Frame = 2
Query: 437 ITLLP-DKEGFAKWLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTWTPAKSNGSGNLPKV 1228
++L+P K W + PA R+W ++ G + GR + +P GE G+ D L G DSA+ P++ L LP G Y L +++ AAA WALGGY + RYKG +A AK++ WP +G +RA + AA++T LVRDL++TP D+GP L A +LA+EFGA +V GD LL +YP IHAVGRA+ R PRL+D+ W G + PKV
Sbjct: 14 VSLIPLSKAALEGWRAAATPAQRAWAEANGFAAES-GRTLALP------GEGGRVDAILV---------GIDSASDPWAFAGLPTGLPVGTYRLDDSAEAATAT--AAAFGWALGGYHYGRYKGPE--------------------------RASAKLV-WP--QGADRAAVERAASATTLVRDLVNTPANDLGPAELAAAAEALAKEFGARFSVVTGDELLTR--NYPMIHAVGRASS--RAPRLIDIEW------GDPSAPKV 221
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A6J4FYD8_9PROT (Leucyl aminopeptidase n=2 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4FYD8_9PROT) HSP 1 Score: 132 bits (333), Expect = 1.340e-29 Identity = 96/241 (39.83%), Postives = 120/241 (49.79%), Query Frame = 2
Query: 473 WLGSRRPAARSWIKSLGQDSHRPGRVILVPSAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIEPGAA---ALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTFLVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVGREPRLLDLTW 1186
WL ++ A RSW+K+ G S G V VP GG+ +A L G+D P+++ L +LP G + L P +P AA ALSW L YSFDRYK GG A A L WP EG +RA + AA + LVRDLI+TP DMGP L A +LA + GA + V VG+ LL E +YP IHAVGRAAG R+PRL+DL W
Sbjct: 26 WLAAQPAATRSWVKASGF-SAEAGAVCAVPGKGGA-------------LALMLAGLGDDD--DPWTIAQLPGKLPPGTWRLS-----PARDPKAATWAALSWLLATYSFDRYK-----------AKGGRAWPA---------------LVWP--EGADRAYVEAAFDAIALVRDLINTPAADMGPPQLAAAAEALAAKHGAGVRVIVGEGLLAE--NYPAIHAVGRAAGHPRQPRLIDLVW 215
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Match: A0A7S4DAN7_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAN7_HETAK) HSP 1 Score: 134 bits (336), Expect = 2.110e-29 Identity = 98/266 (36.84%), Postives = 129/266 (48.50%), Query Frame = 2
Query: 419 GRKAIPITLLPDKEGFAKWLGSRRPAARSWIKSLGQ-DSHRPGRVILVP---SAGGSEGEEGQEDIFLAEVAFCLGERGEDSAASPFSLCSLRDQLPAGVYTLREASGGPLIE--PGAAALSWALGGYSFDRYKGNNGNGNQIGIVAGGSAKEAASESLSSESKAKAKILAWPVEEGVERAKIVAAAASTF-LVRDLISTPCEDMGPEHLQAVLTSLAEEFGASMAVTVGDNLLKEGDSYPQIHAVGRAAGVG-REPRLLDLTWTP 1192
G +A+PI +L +K + W+ R + ++ + LG ++ +PG+ +P +AGG A + + +D S ++L L L G Y LR A GGPL P AAL WALG Y FDRYK N AK L WP G VAA A F LVRDLI+TP EDMGP LQ LA ++GA++AV G LL + +YPQIHAVGRAA + R PRL+ + W P
Sbjct: 84 GVEAVPIIVLTEKT-YKTWVEGRAASQQALLAHLGWGEAFKPGKFAHLPEEPTAGGG----------AAGLVRAMTVAEKDLVGSRYALAKLPASLRPGHYALRAADGGPLPAGAPEKAALGWALGAYKFDRYKSNK------------------------TPAAKKPYLIWPEGVGAAARAAVAAEAGAFALVRDLINTPAEDMGPADLQRCAEGLAADYGAAVAVVAGAELLAQ--NYPQIHAVGRAAELPERAPRLIKMEWGP 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1153.1215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1153.1215.1 >prot_H-elongata_contig1153.1215.1 ID=prot_H-elongata_contig1153.1215.1|Name=mRNA_H-elongata_contig1153.1215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=390bp MSMSMPLLRAGTGCLNLVPRASRGRSGSAAQLSRHAVALGNNSTYSRRAPback to top mRNA from alignment at H-elongata_contig1153:5601..12917+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1153.1215.1 ID=mRNA_H-elongata_contig1153.1215.1|Name=mRNA_H-elongata_contig1153.1215.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7317bp|location=Sequence derived from alignment at H-elongata_contig1153:5601..12917+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1153:5601..12917+ >mRNA_H-elongata_contig1153.1215.1 ID=mRNA_H-elongata_contig1153.1215.1|Name=mRNA_H-elongata_contig1153.1215.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2340bp|location=Sequence derived from alignment at H-elongata_contig1153:5601..12917+ (Himanthalia elongata Himel1 dioecious)back to top |