prot_H-elongata_contig11523.1211.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11523.1211.1
Unique Nameprot_H-elongata_contig11523.1211.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 1.340e-107
Identity = 178/208 (85.58%), Postives = 192/208 (92.31%), Query Frame = 0
Query:    1 MSQSIDEVLLGT-MKARGSSDDEGEG--DKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFLNHVRQEGEFGLPEVGDAGDPE---GIAEVVETLLEDVDSYLDEASGKGANQQVALMRHQLKTVASAARSGPAKYATMVANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPLELAPV 202
            MSQSIDEVLLGT  +  G  D+EGEG  DKFVRQLFESLLLGTRASNAIPDGE QEDYAYNATFPEFR+RAEGCGKQVLE+IQIFLNHV QEGE GLPEVGDAGDPE   GIA+VVETLLEDVDSYLDEA+GKGANQQVALMRHQLKTVASAARSGPAKYA+MV+NVVD+PKPQEAF+ EIDN RDTPFVP+LREKPNA+TPL+LAP+
Sbjct:    1 MSQSIDEVLLGTPARGAGGGDEEGEGEGDKFVRQLFESLLLGTRASNAIPDGEGQEDYAYNATFPEFRSRAEGCGKQVLEVIQIFLNHVSQEGELGLPEVGDAGDPEVFQGIADVVETLLEDVDSYLDEAAGKGANQQVALMRHQLKTVASAARSGPAKYASMVSNVVDMPKPQEAFQEEIDNSRDTPFVPKLREKPNAVTPLDLAPI 208          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: A0A7S3UZH7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UZH7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.190e-19
Identity = 71/191 (37.17%), Postives = 106/191 (55.50%), Query Frame = 0
Query:   28 FVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFLNHVRQEGE-FGLPEVGDAGDP------EGIAEVVETLLEDVDSYLDEA-------SGK-------GANQQVALMRHQLKTVASAARSGPAKYATMVANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPL 197
            F + L+ +L+ GT+ASN++P  E  EDY+Y A+ PEF+ +     K+++ LI  F + V    E F L E+ DA DP      E +A+VV+ LLE+VDSYLDEA       SG         AN QV + + +L     A  +G      ++ +  +I +PQ  F   IDN R +PF+P+L+ K +A+ PL
Sbjct:   20 FEKNLYNALVHGTKASNSLPGDE--EDYSYYASLPEFKDKIGNFRKRIVNLIYKFASRVDSSDELFKLHELIDA-DPADFETFEPVADVVDLLLENVDSYLDEARRHSDNLSGLEKSNPSINANAQVEVSKSELVRDVRAGLNG------VITHDANIQRPQMNFDDAIDNSR-SPFIPKLKHKVHAIVPL 200          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: UPI001457F2D4 (exosome component 10-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457F2D4)

HSP 1 Score: 80.1 bits (196), Expect = 5.690e-14
Identity = 62/186 (33.33%), Postives = 97/186 (52.15%), Query Frame = 0
Query:   27 KFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFLNHVRQEGEF--GLPEVGDAGDP-EGIAEVVETLLEDVDSYLDEASG-----------KGANQQVALMRHQLKTVASAARSGPAKYATMVANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPLE 198
            +F ++   ++L  T++SN +P     +D+ Y ++F  FR   +  GKQ+L ++Q  + H    G+   G  +V D  D  + + +  + +LE V S+LDEASG               +Q A      K   SAA+S PA Y  + A   +I +PQ  F+ ++DN    PFVPR++EKPNAL  LE
Sbjct:   25 EFTQKTLRAVLQATKSSNELPAAG--DDFDYYSSFQGFRDILDIEGKQILHIVQNVMQHQNVRGKLSHGSSDVLDLEDKFDVLTDANDQILERVGSWLDEASGIKKKDNTLVIASATPKQQASTSWNKKKSTSAAKS-PASYHLLSAK--NILRPQLRFKDKVDNGNQ-PFVPRIKEKPNALKSLE 204          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: H3BAQ0_LATCH (HRDC domain-containing protein n=3 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BAQ0_LATCH)

HSP 1 Score: 77.8 bits (190), Expect = 3.590e-13
Identity = 69/214 (32.24%), Postives = 110/214 (51.40%), Query Frame = 0
Query:    8 VLLGTMKARGSSDDE---GE-------GDKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFL------NHVRQEGEFGLPEVGDAGDPEGIAEVVETLLEDVDSYLDEASGKGANQQVAL---MRHQLKTVASAARSGPA----KYATM-VANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPL 197
            V  GT    G++++E   GE        D FV+    +++  T+AS  +P  +  ++Y +  +FP FRA  E  G ++L+ +   +      +H+R   +  + E+ D  D   + +  + +LE V  +LDEASG   NQQ  L   ++     V+S  R G A    K  T  + +  +IP+PQ  FR +IDN  +TPFVP++  KPNAL PL
Sbjct:    8 VGSGTKSKTGTAENEEKEGEVIPGFKDADSFVKYALGTVVTATKASGGLP--QAGDEYDFYCSFPGFRAFCESQGDRLLKCMSQLMQYHGCRSHIRDCNK--VTELEDKFDL--LVDSNDVILERVGIFLDEASGVNKNQQPVLPVGLQPPKTIVSSWNRKGSAANKSKSETFRLLHAKNIPRPQIKFREKIDNS-NTPFVPKIFIKPNALKPL 214          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: A0A210Q5R3_MIZYE (Exosome component 10 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210Q5R3_MIZYE)

HSP 1 Score: 73.6 bits (179), Expect = 1.030e-11
Identity = 55/183 (30.05%), Postives = 93/183 (50.82%), Query Frame = 0
Query:   30 RQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFLNHVRQEGEF--GLPEVGDAGDP-EGIAEVVETLLEDVDSYLDEASG-----------KGANQQVALMRHQLKTVASAARSGPAKYATMVANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPLE 198
            ++   ++L  T+ASN +P     +D+ Y ++F  FR   +  GK++L ++Q  + H    G    G  ++ D  D  + + +  + +LE V S+LDEASG               +Q A      K   SA +S  + +     N++   +PQ  F+ ++DN R+ PFVPR++EKPNA+  LE
Sbjct:    3 QKTLRAVLQATKASNDMPAAG--DDFDYYSSFQGFRDILDIEGKRILHIVQNVMQHQNVRGRLSHGSSDILDLEDKFDVLTDANDQILERVGSWLDEASGIKKKDNTLVLATATPKQQASSSWNKKKSTSATKSAASYHLLSAKNIL---RPQLRFKDKVDN-RNQPFVPRIKEKPNAMKSLE 179          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: A0A8C8VKJ9_9SAUR (Exosome component 10 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8VKJ9_9SAUR)

HSP 1 Score: 72.4 bits (176), Expect = 2.600e-11
Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 0
Query:   24 EGDKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFL------NHVRQEGEFGLPEVGDAGDPEGIAEVVETLLEDVDSYLDEASGKGANQQVALMRH-QL-KTVASA-----ARSGPAKYATM-VANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPL 197
            + D FV+    +++  T+ASN +P  +  ++Y +  +FP FRA  E  G ++L  +   +      +H++   +    E+ D  D   + +  + +LE V   LDEA+G   NQQ  L    QL KTV S+       S   K  T  + +  +I +PQ  FR +IDN  +TPFVP+L  KPNAL PL
Sbjct:   80 DADSFVKHALGTVVAATKASNGLP--QAGDEYDFYRSFPGFRAYCETQGDRLLHCMSKVMQYHGCRSHIKDRSKA--TELEDKFDL--LVDSNDVILERVGILLDEAAGVNKNQQPILPAGMQLPKTVISSWNRKSGESNRTKSETFRLLHAKNITRPQFKFREKIDNS-NTPFVPKLFVKPNALKPL 260          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: A0A7L4N9W6_9AVES (EXOSX protein (Fragment) n=1 Tax=Ceyx cyanopectus TaxID=390723 RepID=A0A7L4N9W6_9AVES)

HSP 1 Score: 72.0 bits (175), Expect = 3.370e-11
Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 0
Query:   15 ARGSSDDEGEG-----------DKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFL------NHVRQEGEFGLPEVGDAGDPEGIAEVVETLLEDVDSYLDEASGKGANQQVALMRHQL--KTVASA-------ARSGPAKYATMVANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPL 197
            A G +  EG G           D FV+    +++  T+ASN +P  +  ++Y +  +FP FRA  E  G+++L  +   +      +H+R   +  + E+ D  D   + +  + +LE V   LDEA+G   NQQ  L       +T+ S+       +  G       + +  +I +PQ  FR ++DN  +TPFVP+L  KPNAL PL
Sbjct:   26 AAGLAGSEGSGSAAVLPGFDDVDAFVKHALGTVVAATKASNGLP--QPGDEYDFYRSFPGFRAFCETQGERLLHCMSRVMQHHGCRSHLRDRSK--VTELEDKFDM--LVDANDIILERVGILLDEAAGVNRNQQPVLPAGSQPPQTIISSWNRKAGESHKGSQSETFRLLHAKNISRPQLRFREKVDNS-NTPFVPKLCIKPNALKPL 227          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: A0A8D2LBW2_VARKO (Exosome component 10 n=3 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LBW2_VARKO)

HSP 1 Score: 72.0 bits (175), Expect = 3.500e-11
Identity = 58/192 (30.21%), Postives = 101/192 (52.60%), Query Frame = 0
Query:   24 EGDKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFL------NHVRQEGEFGLPEVGDAGDPEGIAEVVETLLEDVDSYLDEASGKGANQQVAL---MRHQLKTVASAARSG--PAKYATM----VANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPLELA 200
            + D FV+    +++  T+AS+ +P  +  ++Y +  +FP F+A  E  G ++L+ +   +      +H++   +    E+ D  D   + +  + +LE V   LDEA+G   NQQ  L   ++     ++S  R G   +K+A      + +  +IP+PQ  FR ++DN  +TPFVP+L  KPNAL PL  A
Sbjct:   33 DADSFVKHALGTVVSATKASSGLP--QPGDEYDFYRSFPGFQAYCETQGDRLLQCMSRVMQYHGCRSHLQDHSKA--TELEDKFDL--LVDANDAILERVGMLLDEAAGVNRNQQPVLPVGLQPPKTIISSWNRKGGEASKWARQDTFRLLHAKNIPRPQLRFREKVDNS-NTPFVPKLFVKPNALKPLSEA 217          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: K7FBX4_PELSI (HRDC domain-containing protein n=23 Tax=Cryptodira TaxID=8464 RepID=K7FBX4_PELSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.500e-11
Identity = 58/188 (30.85%), Postives = 95/188 (50.53%), Query Frame = 0
Query:   24 EGDKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFL------NHVRQEGEFGLPEVGDAGDPEGIAEVVETLLEDVDSYLDEASGKGANQQVAL---MRHQLKTVASAARSGPAKYATM-----VANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPL 197
            + D FV+    +++  T+ASN +P  +  ++Y +  +FP FRA  E  G ++L  +   +      +HV+   +    E+ D  D   + +  + +LE V   LDEA+G   NQQ  L   M+     ++S  R     + T      + +  +I +PQ  FR +IDN  +TPF+P+L  KPNAL PL
Sbjct:   45 DADSFVKHALGTVVAATKASNGLP--QPGDEYDFYRSFPGFRAYCETQGDRLLHCMSKVMQYHGCRSHVKDHNKA--TELEDKFDL--LVDSNDVILEKVGILLDEAAGVNKNQQPILPAGMQVPKTIISSWNRKSGESHRTKSEIFRLLHAKNITRPQLRFREKIDNS-NTPFIPKLFVKPNALKPL 225          
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Match: M7CKC7_CHEMY (Non-specific serine/threonine protein kinase n=1 Tax=Chelonia mydas TaxID=8469 RepID=M7CKC7_CHEMY)

HSP 1 Score: 72.0 bits (175), Expect = 3.810e-11
Identity = 59/188 (31.38%), Postives = 95/188 (50.53%), Query Frame = 0
Query:   24 EGDKFVRQLFESLLLGTRASNAIPDGERQEDYAYNATFPEFRARAEGCGKQVLELIQIFL------NHVRQEGEFGLPEVGDAGDPEGIAEVVETLLEDVDSYLDEASGKGANQQVAL---MRHQLKTVASAARSGPAKYATM-----VANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPL 197
            + D FV+    +++  T+ASN +P  +  ++Y +  +FP FRA  E  G ++L  +   +      +H++   +    E+ D  D   + +  + +LE V   LDEA+G   NQQ  L   M+     V+S  R     + T      + +  +I +PQ  FR +IDN  +TPFVP+L  KPNAL PL
Sbjct:  775 DADSFVKHALGTVVAATKASNGLP--QPGDEYDFYRSFPGFRAYCETQGDRLLHCMSKVMQYHGCRSHIKDRSKA--TELEDKFDL--LVDSNDVILERVGILLDEAAGVNKNQQPILPAGMQLPKTIVSSWNRKSGESHRTKSETFRLLHAKNITRPQLKFREKIDNS-NTPFVPKLFVKPNALKPL 955          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11523.1211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE8_ECTSI1.340e-10785.58HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S3UZH7_9STRA5.190e-1937.17Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
UPI001457F2D45.690e-1433.33exosome component 10-like n=1 Tax=Pecten maximus T... [more]
H3BAQ0_LATCH3.590e-1332.24HRDC domain-containing protein n=3 Tax=Latimeria c... [more]
A0A210Q5R3_MIZYE1.030e-1130.05Exosome component 10 n=2 Tax=Mizuhopecten yessoens... [more]
A0A8C8VKJ9_9SAUR2.600e-1133.51Exosome component 10 n=1 Tax=Pelusios castaneus Ta... [more]
A0A7L4N9W6_9AVES3.370e-1129.67EXOSX protein (Fragment) n=1 Tax=Ceyx cyanopectus ... [more]
A0A8D2LBW2_VARKO3.500e-1130.21Exosome component 10 n=3 Tax=Varanus komodoensis T... [more]
K7FBX4_PELSI3.500e-1130.85HRDC domain-containing protein n=23 Tax=Cryptodira... [more]
M7CKC7_CHEMY3.810e-1131.38Non-specific serine/threonine protein kinase n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.500coord: 154..201
e-value: 7.7E-8
score: 33.7
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 24..198
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 24..198
IPR012588Exosome-associated factor Rrp6, N-terminalPFAMPF08066PMC2NTcoord: 40..126
e-value: 2.3E-14
score: 53.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11523contigH-elongata_contig11523:615..3171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11523.1211.1mRNA_H-elongata_contig11523.1211.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11523 615..3171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11523.1211.1 ID=prot_H-elongata_contig11523.1211.1|Name=mRNA_H-elongata_contig11523.1211.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
MSQSIDEVLLGTMKARGSSDDEGEGDKFVRQLFESLLLGTRASNAIPDGE
RQEDYAYNATFPEFRARAEGCGKQVLELIQIFLNHVRQEGEFGLPEVGDA
GDPEGIAEVVETLLEDVDSYLDEASGKGANQQVALMRHQLKTVASAARSG
PAKYATMVANVVDIPKPQEAFRGEIDNDRDTPFVPRLREKPNALTPLELA
PV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012588Exosome-assoc_fac_Rrp6_N