prot_H-elongata_contig115211.1210.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115211.1210.1
Unique Nameprot_H-elongata_contig115211.1210.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
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BLAST of mRNA_H-elongata_contig115211.1210.1 vs. uniprot
Match: D7FTF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF4_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 7.040e-30
Identity = 76/137 (55.47%), Postives = 88/137 (64.23%), Query Frame = 0 
Query:    1 NAATEEGCLEQANSLIMLLKADVRALNICAVRFLPPPSEVEHAADSTADTTDVAVSAYGAETIERLMRRFRQIDTSDSSKG-IEAMSATKQLIVMRERLQAGLSARLLGLKADMENEFGCAFADIESCLLTEKGTSA 136
            N AT+E CL+QANSLIMLLKADVR LN CA R L P SE     DS   T++V  SAY  ETIER                 I+A+SAT QL+++RERLQAGLS+RLL LK  M+ EFG AF D+ES L  EK T A
Sbjct:   38 NVATDEECLKQANSLIMLLKADVRVLNACAARLLLP-SEAAIVTDSA--TSEVPRSAYNVETIERXXXXXXXXXXXXXXXXXIQAVSATNQLLLIRERLQAGLSSRLLELKTKMDKEFGTAFVDMESYLRMEKDTQA 171
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BLAST of mRNA_H-elongata_contig115211.1210.1 vs. uniprot
Match: A0A6H5JEQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ6_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 9.350e-24
Identity = 70/149 (46.98%), Postives = 83/149 (55.70%), Query Frame = 0 
Query:    1 NAATEEGCLEQANSLIMLLKADVRALNICAVRFLPPPSEV-------------EHAADS-TADTTDVAV--SAYGAETIERLMRRFRQIDTSDSS-KGIEAMSATKQLIVMRERLQAGLSARLLGLKADMENEFGCAFADIESCLLTEK 132
            N AT+E CL+QANSLIMLLKADVR LN CA R L P                  H+ D    DTT      SAY  ETI                   ++A+SAT QL+++RERLQAGLS+RLL LK +M+ EFG AF D+ES L  EK
Sbjct:    8 NVATDEECLKQANSLIMLLKADVRVLNACAARLLLPSDAAIVTDSATNEIPRRSHSGDGHLKDTTTFPHENSAYSVETIXXXXXXXXXXXXXXXXXSSLQAVSATNQLLLIRERLQAGLSSRLLELKTEMDKEFGTAFVDMESYLRMEK 156
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115211.1210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTF4_ECTSI7.040e-3055.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEQ6_9PHAE9.350e-2446.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115211contigH-elongata_contig115211:795..1824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115211.1210.1mRNA_H-elongata_contig115211.1210.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115211 795..1824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115211.1210.1 ID=prot_H-elongata_contig115211.1210.1|Name=mRNA_H-elongata_contig115211.1210.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
NAATEEGCLEQANSLIMLLKADVRALNICAVRFLPPPSEVEHAADSTADT
TDVAVSAYGAETIERLMRRFRQIDTSDSSKGIEAMSATKQLIVMRERLQA
GLSARLLGLKADMENEFGCAFADIESCLLTEKGTSAAVVV*
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