prot_H-elongata_contig49174.12100.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig49174.12100.1
Unique Nameprot_H-elongata_contig49174.12100.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: D7FLX8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLX8_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.070e-23
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGLKDELLRGVYAYGFERPSAVQQRAVKPI SGRDVIAQSQSGTGKTAVFS
Sbjct:   34 MGLKDELLRGVYAYGFERPSAVQQRAVKPITSGRDVIAQSQSGTGKTAVFS 84          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: R1DVI5_EMIHU (Q_MOTIF domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DVI5_EMIHU)

HSP 1 Score: 89.7 bits (221), Expect = 2.600e-22
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGLKDELLRG+YAYGFE+PSA+QQRA+ PI+ GRD IAQ+QSGTGKT +FS
Sbjct:   24 MGLKDELLRGIYAYGFEKPSAIQQRAIMPILKGRDTIAQAQSGTGKTTIFS 74          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A7R9AFM3_9CRUS (RNA helicase (Fragment) n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9AFM3_9CRUS)

HSP 1 Score: 90.9 bits (224), Expect = 6.240e-22
Identity = 40/51 (78.43%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGL+++LLRG+YAYGFERPSA+QQR++KP+M GRDVIAQ+QSGTGKTA FS
Sbjct:   34 MGLREDLLRGIYAYGFERPSAIQQRSIKPVMKGRDVIAQAQSGTGKTATFS 84          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A7S2WT78_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT78_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.500e-22
Identity = 44/51 (86.27%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGL++ELLRG+YAYGFERPSA+QQRA+KPI+ GRDVIAQSQSGTGKTAVFS
Sbjct:   95 MGLREELLRGIYAYGFERPSAIQQRAIKPIIMGRDVIAQSQSGTGKTAVFS 145          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: UPI001443481E (eukaryotic initiation factor 4A-III isoform X1 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI001443481E)

HSP 1 Score: 94.0 bits (232), Expect = 7.720e-22
Identity = 43/51 (84.31%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGLKDELLRG+YAYGFE+PSA+QQR++KPIM GRDVIAQ+QSGTGKTA FS
Sbjct:   35 MGLKDELLRGIYAYGFEKPSAIQQRSIKPIMKGRDVIAQAQSGTGKTATFS 85          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A210PMW1_MIZYE (RNA helicase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PMW1_MIZYE)

HSP 1 Score: 91.3 bits (225), Expect = 1.180e-21
Identity = 42/51 (82.35%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGL++ELLRGVYAYGFE+PSA+QQRA+KPI+ GRDVIAQ+QSGTGKTA FS
Sbjct:   35 MGLREELLRGVYAYGFEKPSAIQQRAIKPIVKGRDVIAQAQSGTGKTATFS 85          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A7K0F467_9FLAO (DEAD/DEAH box helicase (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7K0F467_9FLAO)

HSP 1 Score: 87.8 bits (216), Expect = 2.460e-21
Identity = 40/51 (78.43%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGL+++LLRG+YAYGFE+PSA+QQRA+K I+ GRDVIAQSQSGTGKTA FS
Sbjct:   21 MGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFS 71          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A7S1U889_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U889_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.180e-21
Identity = 42/50 (84.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVF 50
            MGLK++LLRG+Y+YGFERPSA+QQRA+KPI +GRDVIAQSQSGTGKTAVF
Sbjct:   92 MGLKEDLLRGIYSYGFERPSAIQQRAIKPITAGRDVIAQSQSGTGKTAVF 141          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A3P7K8R9_STRVU (RNA helicase n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7K8R9_STRVU)

HSP 1 Score: 87.8 bits (216), Expect = 4.220e-21
Identity = 39/51 (76.47%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGL++ LLRG+Y+YGFE+PSA+QQRA+KPI+ GRDVIAQ+QSGTGKTA FS
Sbjct:   36 MGLREPLLRGIYSYGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFS 86          
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Match: A0A7S0E1J2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E1J2_9EUKA)

HSP 1 Score: 88.6 bits (218), Expect = 4.660e-21
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVFS 51
            MGLKDELLRG++AYGFE+PSA+QQRAV PI+ GRD IAQ+QSGTGKT +FS
Sbjct:   30 MGLKDELLRGIFAYGFEKPSAIQQRAVMPILKGRDTIAQAQSGTGKTTIFS 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49174.12100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLX8_ECTSI2.070e-2398.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
R1DVI5_EMIHU2.600e-2278.43Q_MOTIF domain-containing protein n=1 Tax=Emiliani... [more]
A0A7R9AFM3_9CRUS6.240e-2278.43RNA helicase (Fragment) n=1 Tax=Darwinula stevenso... [more]
A0A7S2WT78_9STRA6.500e-2286.27Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
UPI001443481E7.720e-2284.31eukaryotic initiation factor 4A-III isoform X1 n=1... [more]
A0A210PMW1_MIZYE1.180e-2182.35RNA helicase n=1 Tax=Mizuhopecten yessoensis TaxID... [more]
A0A7K0F467_9FLAO2.460e-2178.43DEAD/DEAH box helicase (Fragment) n=2 Tax=cellular... [more]
A0A7S1U889_9STRA4.180e-2184.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A3P7K8R9_STRVU4.220e-2176.47RNA helicase n=1 Tax=Strongylus vulgaris TaxID=403... [more]
A0A7S0E1J2_9EUKA4.660e-2178.43Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 21..51
e-value: 1.7E-6
score: 28.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..51
e-value: 3.7E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR24031:SF623EUKARYOTIC INITIATION FACTOR 4A-IIcoord: 1..50
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..50
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 1..24
score: 8.986
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49174contigH-elongata_contig49174:381..1292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49174.12100.1mRNA_H-elongata_contig49174.12100.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig49174 357..1292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig49174.12100.1 ID=prot_H-elongata_contig49174.12100.1|Name=mRNA_H-elongata_contig49174.12100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MGLKDELLRGVYAYGFERPSAVQQRAVKPIMSGRDVIAQSQSGTGKTAVF
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase