prot_H-elongata_contig101342.121.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101342.121.1
Unique Nameprot_H-elongata_contig101342.121.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length187
Homology
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 2.650e-84
Identity = 135/185 (72.97%), Postives = 153/185 (82.70%), Query Frame = 0
Query:    2 NRADFAKLVTGTVAASVALAAPAMAKSGTAAKQNYFGVLGADQNVGGGYSNYFAESETYSPYSPYGTPDKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEAYNSAQVHLTKYLELI 186
            +RADFAKLVTGTVAA+ A+AAPA+AK+GT AKQN+FGV+GAD  +GGG SNYFAES+TYSPYSPY   D ALY+S D AFM KV++D+LKDSQKRLQ VP FIE ++WEEIRSLLTAKA    YS LRDAMNTL+ DKP A  +AKVFYRDIEQLTVYARQKN     +AYN AQ HLTKYL LI
Sbjct:   34 SRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYKSSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKA----YS-LRDAMNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: A0A6H5KN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN94_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 5.490e-54
Identity = 88/118 (74.58%), Postives = 105/118 (88.98%), Query Frame = 0
Query:    2 NRADFAKLVTGTVAASVALAAPAMAKSGTAAKQNYFGVLGADQNVGGGYSNYFAESETYSPYSPYGTPDKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAK 119
            +RADFAKLVTGTVAA+ A+AAPA+AK+GT AKQN+FGV+GADQ +GGG SNYFAES+TYSPYSPY   D+ALY++ D AFM KV++D+LKDSQKRLQ VP FIE ++WEEIRSLLTAK
Sbjct:   34 SRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDEALYKTSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: K8Z7P0_NANGC (Extrinsic protein in photosystem II n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7P0_NANGC)

HSP 1 Score: 93.2 bits (230), Expect = 4.230e-20
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 0
Query:   24 AMAKSGTAAKQNYFGVLGADQNVGGGYSNYFAESETYSPYSPYGTPDKALYQ---SDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEAYNSAQVHLTKYLELI 186
            A+AKSG   KQ+ FG LG D       S +  +  TYSPYSPYGT + AL++   +DD    +K+    + +S+KR+  +  ++EK+QWEE+R+ LT +   L  S  + A N   K  P A+   K  ++DIE LTV +R+K  + +  AY+ AQ     +L+ +
Sbjct:   69 ALAKSGEGPKQSVFG-LGGDAAS----SPFVQDVPTYSPYSPYGTGENALFKPLNADD----VKLYTSKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRSGQKLAEN---KQSPEASKALKSLFQDIEDLTVASRRKQVDVSQAAYSRAQADFDAFLKAL 222          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: A0A7S1BDA1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDA1_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.480e-9
Identity = 56/180 (31.11%), Postives = 92/180 (51.11%), Query Frame = 0
Query:   10 VTGTVAASVALAAP--AMAKSGTAAKQNYFGVLGADQNVGGGYSNYFAESET-YSPYSPYGTPDKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEAYNSAQVHLTKYLELI 186
            V G + A++ +AAP  A A +G + K + FG++G   ++  G +    +  T YSPYS YGT +  LY + +  F  + Q  V+ +S+ RL  +PA+IEK+QW  +R  LT       Y   R+++   +K        A+ F+  IE+L+  A  K  ++A  A   +   L  +  LI
Sbjct:   38 VFGAIGAAI-IAAPTAASAVAGDSPKFSVFGIVGEKTSMSEGAAYGSDQKSTLYSPYSVYGTGEGKLYDASNPEFDAR-QKAVIAESKVRLTKIPAYIEKKQWFNVRDELTR----YMYGT-RESVRYFAKTS-ETKKAAQTFFVAIEKLSGSATLKKQDEARAAIEESIAALDAFSALI 209          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: B7FZ94_PHATC (Oxygen-evolving enhancer protein 3 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ94_PHATC)

HSP 1 Score: 63.9 bits (154), Expect = 3.020e-9
Identity = 51/153 (33.33%), Postives = 82/153 (53.59%), Query Frame = 0
Query:   24 AMAKSGTAAKQNYFGVLG--ADQNVGGGYSNYFAESETYSPYSPYG---TPDKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEA 171
            A A  G + + + FG++G     + G  Y    A S+ YSPYS YG    PD +LY+  +  ++ + +  +L +++KRLQ +PA+IEK++W E+    T + S   Y   R A++ L K  P     A  F++ IE+  + ARQK+   A  A
Sbjct:   42 ANAAVGESPRFSVFGLIGDGTSYSEGAAYGTDQA-SKLYSPYSVYGEVGNPD-SLYKDTNPEYLARKKA-ILAETRKRLQKLPAYIEKKKWFEV----TTELSRFMYET-RGAIDFLGKS-PEQKKKAVAFFKAIEKTNLSARQKDQAAAASA 185          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: K0SUU3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUU3_THAOC)

HSP 1 Score: 63.5 bits (153), Expect = 5.040e-9
Identity = 52/164 (31.71%), Postives = 88/164 (53.66%), Query Frame = 0
Query:   14 VAASVALAAPAMAKS--GTAAKQNYFGVLG--ADQNVGGGYSNYFAESETYSPYSPYGT--PDKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEA 171
            +AA+ A+ APA A +  G + + + FGV+G     + G  Y +    S  YSPYS YG      ALY +++ A  ++ +   + +SQKRL  +PA++E+++W  ++  LT       Y   R A+  L+ + P    +AK F++ IE+ ++ A  KN +K   A
Sbjct:   43 IAAAAAVIAPAAANAAAGESPRFSVFGVIGDGTSYSEGAAYGSD-QSSAVYSPYSVYGNVGSSDALYSANN-AGEVERKKGFIAESQKRLSKLPAYVERKEWFNVKDELTR----YMYET-RGAVRGLA-ETPEQKKIAKSFFQAIEEASLQATLKNQDKCAAA 198          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: A0A7S2UD36_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD36_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.510e-7
Identity = 51/180 (28.33%), Postives = 90/180 (50.00%), Query Frame = 0
Query:   12 GTVAASVALAAPAMAKS--GTAAKQNYFGVLG--ADQNVGGGYSNYFAESETYSPYSPYGTP-DKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEAYNSAQVHLTKYLELI 186
            G  AA+ A   P  A +  G + + + FG++G     + G  Y +    S+ YSPYS YG   D+ALY++ +  F  + +  V+ +SQ RL+ +PA+IE+++W  ++  LT           R A+  L++ K  +   A  F++ IE     A  +  E+ + A   +QV L  ++  +
Sbjct:   39 GAAAAAAAAFLPVAANAAIGESPRFSVFGLIGDGTSYSEGAAYGSD-QTSKLYSPYSVYGDDTDQALYKAGNPEFK-ENKKKVIAESQLRLKKLPAYIERKEWFNVKDELTRY-----MGETRPAVRGLAETKAQS-KAANAFFKSIEATYGSATLRKGEECMAAALDSQVKLDAFVSTL 210          
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Match: B6ZHE9_9STRA (Extrinsic protein in photosystem II n=2 Tax=Chaetoceros gracilis TaxID=184592 RepID=B6ZHE9_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.980e-5
Identity = 43/152 (28.29%), Postives = 79/152 (51.97%), Query Frame = 0
Query:   29 GTAAKQNYFGVLG--ADQNVGGGYSNYFAESETYSPYSPYGTP-DKALYQSDDGAFMLKVQVDVLKDSQKRLQGVPAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFYRDIEQLTVYARQKNPEKALEAYNSAQV 177
            G + + + FG++G     + G  Y    A+ + YSPYS Y    +K+LY+ D+  ++ + +  VL +++ RLQ +PA+++K++W  ++  LT       Y   R A+ +LS         A+VF+R +E     A  K  + A++A N   +
Sbjct:   59 GESPRFSVFGLVGDGTSYSEGAAYGTDQAD-KLYSPYSVYSPEGEKSLYKPDNAEYLARKKA-VLAETKNRLQKIPAYVDKKEWFNVKDELTR----YMYET-RGAVRSLSSSVTQKEK-AEVFFRALEDTYGAATLKKGD-AVKASNDKAI 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101342.121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LUC2_ECTSI2.650e-8472.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN94_9PHAE5.490e-5474.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8Z7P0_NANGC4.230e-2036.75Extrinsic protein in photosystem II n=3 Tax=Monodo... [more]
A0A7S1BDA1_9STRA2.480e-931.11Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
B7FZ94_PHATC3.020e-933.33Oxygen-evolving enhancer protein 3 n=3 Tax=Phaeoda... [more]
K0SUU3_THAOC5.040e-931.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2UD36_9STRA4.510e-728.33Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B6ZHE9_9STRA3.980e-528.29Extrinsic protein in photosystem II n=2 Tax=Chaeto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008797Oxygen-evolving enhancer protein 3PFAMPF05757PsbQcoord: 90..181
e-value: 7.6E-8
score: 32.3
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 67..186
e-value: 1.1E-18
score: 69.2
IPR023222PsbQ-like domain superfamilySUPERFAMILY101112Oxygen-evolving enhancer protein 3,coord: 84..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101342contigH-elongata_contig101342:725..2304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101342.121.1mRNA_H-elongata_contig101342.121.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101342 725..2304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101342.121.1 ID=prot_H-elongata_contig101342.121.1|Name=mRNA_H-elongata_contig101342.121.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
TNRADFAKLVTGTVAASVALAAPAMAKSGTAAKQNYFGVLGADQNVGGGY
SNYFAESETYSPYSPYGTPDKALYQSDDGAFMLKVQVDVLKDSQKRLQGV
PAFIEKRQWEEIRSLLTAKASLLCYSALRDAMNTLSKDKPNATNMAKVFY
RDIEQLTVYARQKNPEKALEAYNSAQVHLTKYLELI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008797PSII_PsbQ
IPR023222PsbQ-like_dom_sf