prot_H-elongata_contig48864.12057.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48864.12057.1
Unique Nameprot_H-elongata_contig48864.12057.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
BLAST of mRNA_H-elongata_contig48864.12057.1 vs. uniprot
Match: D7FSX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX9_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.530e-8
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 AEGDYVVVKGVKLRHGRGHFVNGKERYNGQWQHDSMHGQGE 41
            +EG Y+V+ GVK R+G G   NGK++Y G+WQ DSMHGQGE
Sbjct:   17 SEGQYIVIDGVKKRNGFGTHTNGKDKYIGEWQLDSMHGQGE 57          
BLAST of mRNA_H-elongata_contig48864.12057.1 vs. uniprot
Match: A0A6A4YZ78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZ78_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 5.300e-6
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0
Query:    2 EGDYVVVKGVKLRHGRGHFVNGKERYNGQWQHDSMHGQG 40
            +GDY     V +RHGRG F+NG E+YNG W  D M G+G
Sbjct:   18 DGDYQSFNQVVMRHGRGTFINGPEKYNGSWHKDQMEGKG 56          
BLAST of mRNA_H-elongata_contig48864.12057.1 vs. uniprot
Match: A0A397CRG5_9STRA (Copper transport protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CRG5_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.620e-5
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0
Query:    2 EGDYVVVKGVKLRHGRGHFVNGKERYNGQWQHDSMHGQG 40
            +GDY     V +RHGRG F+NG E+YNG W  D M G+G
Sbjct:   30 DGDYQSFNQVVMRHGRGTFINGPEKYNGSWHKDQMEGKG 68          
BLAST of mRNA_H-elongata_contig48864.12057.1 vs. uniprot
Match: A0A3R7WM22_9STRA (Copper transport protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WM22_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.490e-5
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0
Query:    2 EGDYVVVKGVKLRHGRGHFVNGKERYNGQWQHDSMHGQGER 42
            +GDY     V +RHGRG F+NG E+YNG W  D M G+ ER
Sbjct:   18 DGDYQSFNQVVMRHGRGTFINGPEKYNGSWHKDQMEGKVER 58          
BLAST of mRNA_H-elongata_contig48864.12057.1 vs. uniprot
Match: A0A7S3SY57_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SY57_9SPIT)

HSP 1 Score: 46.2 bits (108), Expect = 8.040e-5
Identity = 19/42 (45.24%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    2 EGDYVVVKGVKLRHGRGHFVNG---KERYNGQWQHDSMHGQG 40
            +GD+++V GV+ RHG G +++G    + Y G+WQ+D MHG+G
Sbjct:   36 DGDWIIVDGVRQRHGHGLYIDGIVKGQSYQGEWQNDKMHGRG 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48864.12057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FSX9_ECTSI1.530e-860.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A4YZ78_9STRA5.300e-653.85Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A397CRG5_9STRA1.620e-553.85Copper transport protein n=3 Tax=Aphanomyces astac... [more]
A0A3R7WM22_9STRA2.490e-553.66Copper transport protein n=3 Tax=Aphanomyces astac... [more]
A0A7S3SY57_9SPIT8.040e-545.24Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48864contigH-elongata_contig48864:57..182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48864.12057.1mRNA_H-elongata_contig48864.12057.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48864 57..182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48864.12057.1 ID=prot_H-elongata_contig48864.12057.1|Name=mRNA_H-elongata_contig48864.12057.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
AEGDYVVVKGVKLRHGRGHFVNGKERYNGQWQHDSMHGQGER
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