prot_H-elongata_contig115152.1205.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig115152.1205.1
Unique Nameprot_H-elongata_contig115152.1205.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length217
Homology
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: D8LCF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCF0_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 2.870e-127
Identity = 186/210 (88.57%), Postives = 199/210 (94.76%), Query Frame = 0
Query:    7 NEQTAAVKKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            +++ AA KK EIF+RAERYVKEYR QEND+IRFRREAKA GNI+VPAEA VV+V+RIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAAT+KMLRLVEPY+AYGYPNLKTVRELIYKRGFGKV KQRIPISDNSV+EG+LGK GIICVEDLIHEIYTVGP FK ANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKIN L+KRML
Sbjct:   38 DQKAAAAKKTEIFERAERYVKEYRAQENDSIRFRREAKAAGNIHVPAEAGVVIVVRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATVKMLRLVEPYVAYGYPNLKTVRELIYKRGFGKVNKQRIPISDNSVIEGTLGKAGIICVEDLIHEIYTVGPNFKAANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINALIKRML 247          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A836CG85_9STRA (Ribosomal protein L30, ferredoxin-like fold domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG85_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.280e-105
Identity = 155/205 (75.61%), Postives = 180/205 (87.80%), Query Frame = 0
Query:   12 AVKKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            A K+ E+F RA++Y +EY D +  AI  RR AK  GN YVPAEAK+ +VIRIRGIIGV PKVRKILQLLRLRQINN+VFVKLNAATIKMLRLVEPYIAYGYPNLKT+++L+YKRGFGKV+K RIPISDNSV+EG LGK+GI+ V+DLIHEIYTVGP FK+ANNFLWPFKLSNP GGF QKLLHFNEGG+AGQRG +IN +++ M+
Sbjct:   35 AAKRKELFVRAQKYEQEYNDADKAAIDLRRAAKKEGNFYVPAEAKLAVVIRIRGIIGVGPKVRKILQLLRLRQINNTVFVKLNAATIKMLRLVEPYIAYGYPNLKTIKQLVYKRGFGKVRKSRIPISDNSVIEGVLGKYGIVGVDDLIHEIYTVGPHFKEANNFLWPFKLSNPTGGFTQKLLHFNEGGEAGQRGEEINKMIRLMV 239          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A7S2WW50_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW50_9STRA)

HSP 1 Score: 310 bits (793), Expect = 3.770e-104
Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 0
Query:    4 KLPNEQTAAVKKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            K   E  AA  K+++ KRAE YV EY+  ENDAIR RREAK  G+ YVP E K+  V+RIRGIIGVSPKVRKILQLLRLRQI+N VFVKLN+ATIKMLRLVEPYIAYGYPNLK+ REL+ KRGFGKV KQRI ISDNSV+E  LGK+ IICVEDLIHEIYTVGP FK+A+NFLWP KLS+P GGF +KL+HFNEGG+AG RG KINGL+K+M+
Sbjct:   44 KAAAELKAAENKEQMLKRAETYVNEYKQMENDAIRLRREAKVAGSYYVPEEPKLAFVVRIRGIIGVSPKVRKILQLLRLRQIHNGVFVKLNSATIKMLRLVEPYIAYGYPNLKSTRELVLKRGFGKVNKQRIAISDNSVIEQVLGKYDIICVEDLIHEIYTVGPHFKEASNFLWPMKLSSPKGGFSRKLIHFNEGGEAGLRGDKINGLIKQMI 256          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A7S3V109_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V109_9STRA)

HSP 1 Score: 308 bits (790), Expect = 6.030e-104
Identity = 152/204 (74.51%), Postives = 179/204 (87.75%), Query Frame = 0
Query:   13 VKKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            VK+ + FKRAE+YVKEY+  END +R +R AK+ GN+YV  E+K+++  RIRGIIG+SPKVRKILQLLRLRQI+N+VF+K N ATI MLRLVEP++AYGYP+LKTVREL+YKRGFGKV KQRIPI+DNSV+E  LGK  IICVEDLIHEIYTVGP FK A NFLWPFKLS+PNGGF++KLLHFNEGGDAG RGAKIN L+KRM+
Sbjct:   36 VKRSKAFKRAEQYVKEYKAAENDLVRLKRVAKSEGNLYVEPESKLIVATRIRGIIGISPKVRKILQLLRLRQIHNTVFLKANKATINMLRLVEPFVAYGYPSLKTVRELVYKRGFGKVNKQRIPIADNSVIEEVLGKKDIICVEDLIHEIYTVGPNFKAAANFLWPFKLSSPNGGFKRKLLHFNEGGDAGNRGAKINALIKRMI 239          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A7S4E8W3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8W3_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.840e-100
Identity = 148/203 (72.91%), Postives = 174/203 (85.71%), Query Frame = 0
Query:   14 KKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            KKD IFKRAE+Y  EY+ QENDAIR RREAK   +IYVP EAK+  VIRIRGIIG+SPKV+KILQLLRLRQ+++ VFVKLN +TIKMLRLVEPYIAYG PNLKTVREL+YKRG+GKV KQR+PI +N+VVE  LGK+ I+CVED+IHE+YT GP FK+  NFLWP KLS+P GGF+ KLLH+NEGGDAG RG KI+ LVK+M+
Sbjct:   36 KKDVIFKRAEKYAAEYKQQENDAIRLRREAKKANSIYVPPEAKLAFVIRIRGIIGMSPKVKKILQLLRLRQLHSGVFVKLNGSTIKMLRLVEPYIAYGTPNLKTVRELVYKRGYGKVNKQRVPIDNNAVVEQVLGKYDIVCVEDVIHELYTTGPHFKEVANFLWPCKLSSPTGGFKMKLLHYNEGGDAGDRGEKIHELVKKMI 238          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A4D9CRP3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRP3_9STRA)

HSP 1 Score: 293 bits (751), Expect = 4.820e-98
Identity = 147/215 (68.37%), Postives = 174/215 (80.93%), Query Frame = 0
Query:    2 AIKLPNEQTAAVKKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            A K   ++ A  K+ E  KRAE+Y+ EY+  END IR RREAKA G  YVPAEAKV  V+RIRGI GVSPKV+KILQLLRLRQI+N VF+KLN +T+ +LR VEPYIAYGYPNLK+VRELIYKRG+ KV KQR+P++DN++VE  LGK+G+ICVEDLIHEIYTVGP FKQA NFLWPFKLS+P GG++ K  HF EGGDAG RG KIN  +K +L
Sbjct:   23 AEKAAAKKAARAKRGETVKRAEKYMNEYKKLENDQIRLRREAKASGAFYVPAEAKVAFVMRIRGINGVSPKVKKILQLLRLRQIHNGVFIKLNGSTVNLLRWVEPYIAYGYPNLKSVRELIYKRGYAKVNKQRLPLTDNTLVEQELGKYGLICVEDLIHEIYTVGPHFKQAANFLWPFKLSSPKGGYKDKKTHFIEGGDAGARGDKINAFIKAVL 237          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A7S1G5B0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5B0_9STRA)

HSP 1 Score: 293 bits (751), Expect = 5.340e-98
Identity = 151/212 (71.23%), Postives = 176/212 (83.02%), Query Frame = 0
Query:   11 AAVKKD------EIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            AAV++D      E FKRAE+YVKEYR +E   +R RR+AK  GN +V  E K+ LV+RIRGI+GVSPKVRKILQLLRLRQINN+VFV++N AT  ML +VEPYIA+GYPNLKTVREL+YKRGFGKV KQRIP++DNSV+EG LGK  IICVEDL+HEI TVGP FK+ANNFLWPFKLS+P GGF +KL HFNEGG+AG R  KIN LV+RML
Sbjct:   29 AAVRRDAKKNRTEAFKRAEKYVKEYRAEERSLLRLRRQAKKAGNFFVEPEGKLALVVRIRGIMGVSPKVRKILQLLRLRQINNAVFVRINKATRNMLTIVEPYIAWGYPNLKTVRELVYKRGFGKVNKQRIPLTDNSVIEGVLGKKDIICVEDLVHEITTVGPAFKEANNFLWPFKLSSPLGGFSKKLRHFNEGGEAGCREDKINALVQRML 240          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: A0A2D4BFA6_PYTIN (Uncharacterized protein n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BFA6_PYTIN)

HSP 1 Score: 292 bits (748), Expect = 1.530e-97
Identity = 144/198 (72.73%), Postives = 168/198 (84.85%), Query Frame = 0
Query:   19 FKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            FK AE+YVKEYR  E   +  RR+AK+ GN YVPAEAK+  VIRIRGIIGVSPKVRKILQL RLRQI N VFVKLN ATI MLRLVEP++ YGYPNLKT RELIYKRGFGKV+ QRI ++DNS++E SLG  GIIC+EDLIHEI+TVGP FK+A+NFLWPF+LS+PNGG++QKLLHF EGGDAG RG +IN  +K++L
Sbjct:   43 FKSAEKYVKEYRQIEKQNVLLRRQAKSTGNFYVPAEAKLAFVIRIRGIIGVSPKVRKILQLFRLRQIQNGVFVKLNKATINMLRLVEPFVTYGYPNLKTTRELIYKRGFGKVRGQRIALTDNSIIEKSLGHHGIICIEDLIHEIFTVGPHFKEASNFLWPFQLSSPNGGYKQKLLHFCEGGDAGNRGEEINKFIKKVL 240          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: UPI001F045B80 (60S ribosomal protein L7-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F045B80)

HSP 1 Score: 292 bits (748), Expect = 1.690e-97
Identity = 144/198 (72.73%), Postives = 169/198 (85.35%), Query Frame = 0
Query:   18 IFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRM 215
            IFKRAE+YVKEYR +E+D IR +R AK  GN YVP+EAK+  VIRIRGI GVSP+VRKILQL RL QINN VFVKLN AT+ ML +++PY+A+GYPNLK+VRELIYKRGF K+ KQRIPI+DNS++E SLGKFGIICVEDLIHEI+T+GP FK+ANNFLWPFKLSNP GG R+K  HF EGGD G R  KINGL+++M
Sbjct:   45 IFKRAEQYVKEYRLKEHDEIRMKRMAKQFGNFYVPSEAKLAFVIRIRGINGVSPRVRKILQLFRLLQINNGVFVKLNKATLNMLNIIQPYVAFGYPNLKSVRELIYKRGFVKINKQRIPITDNSLIEESLGKFGIICVEDLIHEIFTIGPHFKEANNFLWPFKLSNPTGGLRKKRNHFVEGGDFGNREDKINGLIRKM 242          
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Match: F0XYU4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYU4_AURAN)

HSP 1 Score: 291 bits (745), Expect = 4.080e-97
Identity = 147/203 (72.41%), Postives = 172/203 (84.73%), Query Frame = 0
Query:   14 KKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIYVPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKMLRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKFGIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGDAGQRGAKINGLVKRML 216
            KK+  FKRAE+Y+ EY+  ENDAIR RREAKA  +IYVP E K+  VIRIRGIIG+SPKV+KILQLLRLRQ+++ VFVKL  AT KMLRLVEPYIAYG PNLK+VRE IYKRG+GKV K+R+PI +N+VVE  LGK+ IICVEDLIHEIYTVGP F++A NFLWP KLS+P GGF+ KLLH+NEGGDAG RG KI+ LVK+ML
Sbjct:   36 KKEVTFKRAEKYMAEYKAAENDAIRLRREAKAANSIYVPPEGKLAFVIRIRGIIGMSPKVKKILQLLRLRQLHSGVFVKLTGATTKMLRLVEPYIAYGEPNLKSVRECIYKRGYGKVNKKRVPIDNNAVVEDVLGKYDIICVEDLIHEIYTVGPHFREAANFLWPVKLSSPTGGFKAKLLHYNEGGDAGYRGEKIHELVKKML 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig115152.1205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCF0_ECTSI2.870e-12788.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG85_9STRA1.280e-10575.61Ribosomal protein L30, ferredoxin-like fold domain... [more]
A0A7S2WW50_9STRA3.770e-10473.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3V109_9STRA6.030e-10474.51Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S4E8W3_9STRA1.840e-10072.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9CRP3_9STRA4.820e-9868.37Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1G5B0_9STRA5.340e-9871.23Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2D4BFA6_PYTIN1.530e-9772.73Uncharacterized protein n=3 Tax=Pythium TaxID=4797... [more]
UPI001F045B801.690e-9772.7360S ribosomal protein L7-like n=1 Tax=Xenia sp. Ca... [more]
F0XYU4_AURAN4.080e-9772.41Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availablePANTHERPTHR11524:SF1660S RIBOSOMAL PROTEIN L7coord: 9..215
IPR023106Ribosomal protein L30, central domain, archaeal typeGENE3D1.10.15.30coord: 114..176
e-value: 3.1E-28
score: 100.4
IPR016082Ribosomal protein L30, ferredoxin-like fold domainPFAMPF00327Ribosomal_L30coord: 59..108
e-value: 2.0E-22
score: 78.8
IPR012988Ribosomal protein L30, N-terminalPFAMPF08079Ribosomal_L30_Ncoord: 9..53
e-value: 4.8E-16
score: 58.8
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilyGENE3D3.30.1390.20coord: 60..204
e-value: 3.1E-28
score: 100.4
IPR036919Ribosomal protein L30, ferredoxin-like fold domain superfamilySUPERFAMILY55129Ribosomal protein L30p/L7ecoord: 58..216
IPR005998Ribosomal protein L7, eukaryoticTIGRFAMTIGR01310TIGR01310coord: 9..216
e-value: 1.8E-93
score: 310.4
IPR039699Ribosomal protein L7/L30PANTHERPTHR1152460S RIBOSOMAL PROTEIN L7coord: 9..215
IPR018038Ribosomal protein L30, conserved sitePROSITEPS00634RIBOSOMAL_L30coord: 76..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig115152contigH-elongata_contig115152:714..1364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig115152.1205.1mRNA_H-elongata_contig115152.1205.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig115152 714..1364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig115152.1205.1 ID=prot_H-elongata_contig115152.1205.1|Name=mRNA_H-elongata_contig115152.1205.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp
SAIKLPNEQTAAVKKDEIFKRAERYVKEYRDQENDAIRFRREAKAMGNIY
VPAEAKVVLVIRIRGIIGVSPKVRKILQLLRLRQINNSVFVKLNAATIKM
LRLVEPYIAYGYPNLKTVRELIYKRGFGKVQKQRIPISDNSVVEGSLGKF
GIICVEDLIHEIYTVGPKFKQANNFLWPFKLSNPNGGFRQKLLHFNEGGD
AGQRGAKINGLVKRML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023106Ribosomal_L30_central_dom_arc
IPR016082Ribosomal_L30_ferredoxin-like
IPR012988Ribosomal_L30_N
IPR036919L30_ferredoxin-like_sf
IPR005998Ribosomal_L7_euk
IPR039699Ribosomal_L7/L30
IPR018038Ribosomal_L30_CS