prot_H-elongata_contig48753.12042.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48753.12042.1
Unique Nameprot_H-elongata_contig48753.12042.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
[Close]
BLAST of mRNA_H-elongata_contig48753.12042.1 vs. uniprot
Match: D7G793_ECTSI (Mannitol 1-phosphate dehydrogenase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G793_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.640e-6
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:  138 EKVYRADDVLVRESDIAACKPFDECDTSPEALGTAFG 174
            ++VY+ADD +VRESDI  C+ +DECD SPE LGT FG
Sbjct:   18 KQVYKADDTIVRESDIENCRTYDECDLSPETLGTPFG 54
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48753.12042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G793_ECTSI1.640e-664.86Mannitol 1-phosphate dehydrogenase, partial n=1 Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48753contigH-elongata_contig48753:431..3428 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48753.12042.1mRNA_H-elongata_contig48753.12042.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48753 431..3451 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48753.12042.1 ID=prot_H-elongata_contig48753.12042.1|Name=mRNA_H-elongata_contig48753.12042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MFISAHPPPPGDTLRLPMQVPARVAMERVTARPLRRSPCRAMLLALGALS
WAPRSSLAFWFNLPFAPHRHAILVTAGFYSPAANNPRSDSDHGPARLTGW
PECSSGRQRCSRLTRMCSGLRLMMAAAPGESGSSAQTEKVYRADDVLVRE
SDIAACKPFDECDTSPEALGTAFGG
back to top