prot_H-elongata_contig48424.11995.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48424.11995.1
Unique Nameprot_H-elongata_contig48424.11995.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length446
Homology
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 2.420e-168
Identity = 245/408 (60.05%), Postives = 296/408 (72.55%), Query Frame = 0
Query:   26 KSSIRWASDTGLNGRMYLEDGGCGTMTDLYESR-VESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIRETD 432
            + S R+A+ +G+ GR+Y E  GC TMTDLY  R  E+DG + KGP+Y+LD++   +  P+ +T  WLL ++L+I  G VFYC+GT  GGDC++LRIQSTGS DF+EVRGHGGSLYFE+T+VTSWDTPN+ PQE YE+GRSFLNCVSE  + + CEG  KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVFE TNVYGD+  SDIHH+YY  YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                              GGA A GIFLHRSSD   V+DN + +MQDAG+A++E+FDA I+ N     KYGIR+ LG GNN VY N F + S+YGLYTY+GSD P+ S DGRPS N    N + +   GVKI+E D
Sbjct:  427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGD 832          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 1.830e-167
Identity = 242/395 (61.27%), Postives = 295/395 (74.68%), Query Frame = 0
Query:   44 EDGGCGTMTDLYESRVESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTP-EASSDGRPSDNSFYDNTISNTETGVKIRETDNTAIT 437
            E  GC T+TDLY  R+ESDG + KGPI+ LD++ + + +P  ++ KWLLT++L I  G+VFYCRG+ +GGDCDELRIQSTG TDF+EVR HGGS+YFE+T+VTSWDTPN+TPQ  Y  GRSFLNCVSE  + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VF+TTNVYG++  SDIHH YY  YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT                                GG  A GIFLHRSSD   V+DNVV+DMQDAGMA++E+ +ADI++N F++VK+GIR+ LG   N V++N+F++ S  GLYTYQGSD P +  SDGRPSDN F +N I N   GVKI+E D+T IT
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVIT 464          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 1.110e-159
Identity = 232/404 (57.43%), Postives = 287/404 (71.04%), Query Frame = 0
Query:   44 EDGGCGTMTDLYESR-VESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIRETDNTAIT 437
            E  GC T+TDLY  R  E+DG + KGP+Y+LD +   + +PTSVT KWLL ++L++  G++FYC G+  GGDCDELRIQSTG  D+ EVRGHGGS+YF +T+VTSWDTPN+ PQE YE GRSFLNCVSE  + ETC+G  KND GECRMDII+SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VFETTNVYGDIKNSDIHHMYY  YSYGHQGGVWTNN+MHDNHQY            +A                              GG +AVGIFLHRSSD+ EVY N +++M DAG+A++E+F+ADIHDN    V++GIR+ LG G N VYDN F++CS +GLYTY GSD P+ S+ GRP+ N+F +N ++N+  GVK + +DN  +T
Sbjct:   18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVT 407          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 4.540e-157
Identity = 225/398 (56.53%), Postives = 276/398 (69.35%), Query Frame = 0
Query:   44 EDGGCGTMTDLYESRVESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIRETDNTAITGEA 440
            + GGC T++DLY  +   +    KGP+++LD ND +  + T+ TGKWLLT+DLF+  G+  YCRG GVGG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + PQE Y+DGRSF+ CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SE+YG+TWKVRGFC+D SNP+VF+  NVYGD+K SDIHHMYY MYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                              GGA+A GIFLHRS D  EVY N + +M DAG+A++E    DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP DN FY+NTI  TETGVKI+E+DN +IT  A
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNA 400          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 3.700e-146
Identity = 210/348 (60.34%), Postives = 249/348 (71.55%), Query Frame = 0
Query:   51 MTDLYESR-VESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSK 389
            MTDLY  R  E DG + KGP+Y+LD++   +  P+ +T  WLL ++L+I  G VFYC+GT  GGDC++LRIQSTGS DF+EVRGHGGSLYFE+T+VTSWDTPN+ PQE YE GRSFLNCVSE  + + CEG  KN+ GECRMDII+SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVF+ TNVYGD+  SDIHH+YY  YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT                                GGA AVGIFLHRSSD   V+DN + +MQDAG+A++EAFDA I+ NT    KYGIR+ LG GNN+VY N F + S+
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 5.660e-131
Identity = 211/403 (52.36%), Postives = 263/403 (65.26%), Query Frame = 0
Query:   39 GRMYLEDGGCGTMTDLYESRVESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSD--GRPSDNSFYDNTISNTETGVKIRETDNTAIT 437
            G+ Y+  GGC T+TD+Y ++    G    GP+++LD ND+++    S TG WLL  D+ +  GS+    G   GGD   LRIQSTGS D+ E+RGHGGSL F +T VTSWDT  +     Y+  RSF+ CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVFE T V GDI +SDI+ MYY  YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                              GG  AVGIFLHRSSD CEV+ N VYDM+DAGMAIME+  A IHDNTFTNVKYGIR+ +G   N+V +N F EC +YG+YTYQG+D PEAS D  G   DN+F+ NT+   E GVKI++ +    T
Sbjct:  398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFT 792          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 3.320e-130
Identity = 211/402 (52.49%), Postives = 268/402 (66.67%), Query Frame = 0
Query:   42 YLEDGGCGTMTDLYESRVESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEA-SSDGRPSDNSFYDNTISNT--ETGVKIRETD 432
            Y E GGCGT+T +YE++ E DG     P+Y+LDEN+D++    + TG WLL  +L ++ GS     GT   GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N   +E   DGRSF+NCV++++      C+G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+FE  NVYGDI NS+I+ MYY  YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+                              GG +AVGIFLHRSSD  EV+DNVVY+MQDAGMA+ME++DA+I+DN+FTN +YGIR+ LG G N++ +N+F   ++YGLYTY GSD P+  +S+GRPSDN F  NTI       GV I+E D
Sbjct:  192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGD 584          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 8.350e-128
Identity = 215/377 (57.03%), Postives = 251/377 (66.58%), Query Frame = 0
Query:   72 ILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIRETDNTAI-----TGEAKLE 443
            +LD++ + + SPTSVT KWLL S+L++  G++FYC G+  GGDCDELRIQSTG  D+ EVRGHGGS+YF +T+VTSWDTPN+ PQE YE GRSFLNCVSE  + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VFETTNVYGDIKNS+IHHMYY MYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                 GG  AVGIFLHRSSD+ EVY                                                        G       D P+ S+ GRP+ N+F +N I+NT  GVKI+ +DN  I     TG  +LE
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELE 321          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 3.850e-118
Identity = 195/416 (46.88%), Postives = 251/416 (60.34%), Query Frame = 0
Query:   28 SIRWASDTGLNGRMYLED-------GGCGTMTDLYESRVESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIRETDNT 434
            SIR+A   G   R+YLE        GGC T+  ++ESR        KGP+Y +D +   +   TS TG WLLT +L++  G      G+  GGD DELR+ ST  T  N +R HGGSL F +T V SWDT   +P E   DGRS+++ +SE   + DETCEG  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVF+  NVYG++ +SDIHHM + +Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   V  N V+D  DAG+A++E+F+AD+ +NTF N KYG+R  +G  +N+  +N     ++Y  Y+Y G+D P+  S GR  +N F  N+ S  E  +KI+E D T
Sbjct:   45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNV--STSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFIN-LRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGT 448          
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 4.350e-118
Identity = 201/435 (46.21%), Postives = 260/435 (59.77%), Query Frame = 0
Query:    9 TFSPTQVMTIADECTGTKSSIRWASDTGLNGRMYLED------GGCGTMTDLYESRVESDGWTPKGPIYILD-ENDDIMYSPTSVTGKWLLTSDLFILRGSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNQTPQEVYEDGRSFLNCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIMEAFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDTPEASSDGRPSDNSFYDNTISNTETGVKIRETDNT 434
            T SP   ++  D  +  + SIR+A   G   R+YLE       GGC T+  ++ESR        K P+Y +D ++ D+  + T   G WLLT +L++  G      GT  GGD DELR+ ST  T  N +R HGGSL F  T V SWDT   +P E   DGRS+++ VSE   + DETCEG  KN  GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+F+  NVYG++ +SDIHH+ + +Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   V  N V+D  DAG+A++E+F+AD+ +NTF N KYG+R+ +G  +N+  +N+    SKY  YTY GSD P+  S GR  +N F  N+ S  E  +KI+E D T
Sbjct:   31 TASPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYIN-LRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGT 452          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48424.11995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC73_ECTSI2.420e-16860.05Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRM4_ECTSI1.830e-16761.27Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE1.110e-15957.43MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI4.540e-15756.53Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE3.700e-14660.34MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JNF5_9PHAE5.660e-13152.36MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G8D9_ECTSI3.320e-13052.49Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FIU4_ECTSI8.350e-12857.03Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI3.850e-11846.88Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI4.350e-11846.21Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 278..300
e-value: 5.9
score: 15.9
coord: 351..372
e-value: 37.0
score: 13.2
coord: 328..350
e-value: 1200.0
score: 6.6
coord: 232..262
e-value: 6800.0
score: 1.3
coord: 374..396
e-value: 330.0
score: 10.0
coord: 409..430
e-value: 370.0
score: 9.9
coord: 302..326
e-value: 780.0
score: 8.0
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 299..438
e-value: 3.8E-13
score: 49.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 72..407
e-value: 8.4E-86
score: 290.3
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 105..437

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48424contigH-elongata_contig48424:1890..4114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48424.11995.1mRNA_H-elongata_contig48424.11995.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48424 1890..4114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48424.11995.1 ID=prot_H-elongata_contig48424.11995.1|Name=mRNA_H-elongata_contig48424.11995.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=446bp
MPDGSSIPTFSPTQVMTIADECTGTKSSIRWASDTGLNGRMYLEDGGCGT
MTDLYESRVESDGWTPKGPIYILDENDDIMYSPTSVTGKWLLTSDLFILR
GSVFYCRGTGVGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDT
PNQTPQEVYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGY
LGWFDSESYGLTWKVRGFCADKSNPEVFETTNVYGDIKNSDIHHMYYSMY
SYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASK
RCNDLKIYENEVYNGGANAVGIFLHRSSDSCEVYDNVVYDMQDAGMAIME
AFDADIHDNTFTNVKYGIRIRLGGGNNMVYDNVFDECSKYGLYTYQGSDT
PEASSDGRPSDNSFYDNTISNTETGVKIRETDNTAITGEAKLERK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence