prot_H-elongata_contig115034.1199.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig115034.1199.1
Unique Name	prot_H-elongata_contig115034.1199.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	133

Homology

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A453MY03_AEGTS (Histone H4 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MY03_AEGTS)

HSP 1 Score: 205 bits (521), Expect = 4.840e-66
Identity = 110/129 (85.27%), Postives = 116/129 (89.92%), Query Frame = 0

Query:    4 TTPHQPHPATFQSSSSELHLDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            T P Q HP   QS+ S+L   +  + MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 TVPLQIHP--IQSARSQLQGRRKPSTMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 129

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: W5QFN7_SHEEP (Histone H4 n=3 Tax=Bilateria TaxID=33213 RepID=W5QFN7_SHEEP)

HSP 1 Score: 203 bits (517), Expect = 1.060e-65
Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 0

Query:   25 KHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            +H+ NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 QHLGNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 110

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.220e-65
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0

Query:   24 DKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            +K  +NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   17 NKPTSNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A2K2DI93_BRADI (Histone H4 (Fragment) n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2DI93_BRADI)

HSP 1 Score: 203 bits (516), Expect = 3.630e-65
Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0

Query:   20 ELHLDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            EL L    + MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   25 ELSLTHRASEMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 137

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: UPI001600ADDD (histone H4-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001600ADDD)

HSP 1 Score: 202 bits (514), Expect = 6.220e-65
Identity = 106/127 (83.46%), Postives = 109/127 (85.83%), Query Frame = 0

Query:    6 PHQPHPATFQSSSSELHLDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            P   HP     S    H    +  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 PRSVHPFKLSQSPVRPHSSTQLIKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 132

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A6P6HBW6_PUMCO (Histone H4 n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A6P6HBW6_PUMCO)

HSP 1 Score: 201 bits (511), Expect = 8.750e-65
Identity = 102/110 (92.73%), Postives = 108/110 (98.18%), Query Frame = 0

Query:   23 LDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            +++  A+MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MNRKTASMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 110

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: W5PHH3_SHEEP (Histone H4 n=4 Tax=Pecora TaxID=35500 RepID=W5PHH3_SHEEP)

HSP 1 Score: 201 bits (510), Expect = 1.090e-64
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0

Query:   27 VANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            VA+MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 VADMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 106

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A8B8CHU8_CRAVI (Histone H4 n=4 Tax=Bilateria TaxID=33213 RepID=A0A8B8CHU8_CRAVI)

HSP 1 Score: 204 bits (520), Expect = 1.120e-64
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0

Query:   21 LHLDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            L  D ++ANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:  104 LFEDTNLANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 215

[Close]

BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A2P5DRN5_PARAD (Histone H4 (Fragment) n=1 Tax=Parasponia andersonii TaxID=3476 RepID=A0A2P5DRN5_PARAD)

HSP 1 Score: 201 bits (511), Expect = 1.520e-64
Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 0

Query:   14 FQSSSSELHLDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            F+    E   +   A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    9 FEKKKGERKENSRRAKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 127

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BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Match: A0A1G4M1Q1_ANAPH (Core histone H2A/H2B/H3/H4 n=1 Tax=Anaplasma phagocytophilum TaxID=948 RepID=A0A1G4M1Q1_ANAPH)

HSP 1 Score: 201 bits (512), Expect = 1.580e-64
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0

Query:   23 LDKHVANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 132
            L    ANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   30 LPVFAANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 139

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot

BLAST of mRNA_H-elongata_contig115034.1199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A453MY03_AEGTS	4.840e-66	85.27	Histone H4 n=1 Tax=Aegilops tauschii subsp. strang...	[more]
W5QFN7_SHEEP	1.060e-65	95.37	Histone H4 n=3 Tax=Bilateria TaxID=33213 RepID=W5Q...	[more]
A0A3L6V663_9STRA	1.220e-65	96.33	Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID...	[more]
A0A2K2DI93_BRADI	3.630e-65	92.04	Histone H4 (Fragment) n=1 Tax=Brachypodium distach...	[more]
UPI001600ADDD	6.220e-65	83.46	histone H4-like n=1 Tax=Branchiostoma floridae Tax...	[more]
A0A6P6HBW6_PUMCO	8.750e-65	92.73	Histone H4 n=2 Tax=Euteleostomi TaxID=117571 RepID...	[more]
W5PHH3_SHEEP	1.090e-64	97.17	Histone H4 n=4 Tax=Pecora TaxID=35500 RepID=W5PHH3...	[more]
A0A8B8CHU8_CRAVI	1.120e-64	93.75	Histone H4 n=4 Tax=Bilateria TaxID=33213 RepID=A0A...	[more]
A0A2P5DRN5_PARAD	1.520e-64	87.39	Histone H4 (Fragment) n=1 Tax=Parasponia andersoni...	[more]
A0A1G4M1Q1_ANAPH	1.580e-64	94.55	Core histone H2A/H2B/H3/H4 n=1 Tax=Anaplasma phago...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 91..105 score: 91.96 coord: 34..45 score: 95.59 coord: 118..129 score: 97.79 coord: 49..68 score: 93.38 coord: 106..118 score: 90.05 coord: 69..89 score: 93.56
IPR001951	Histone H4	SMART	SM00417	h44	coord: 45..119 e-value: 1.8E-29 score: 113.9
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 31..132 e-value: 5.6E-60 score: 201.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 32..131
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 66..125 e-value: 4.2E-8 score: 33.3
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 19..132
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 19..132
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 44..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig115034	contig	H-elongata_contig115034:1637..2035 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig115034.1199.1	mRNA_H-elongata_contig115034.1199.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig115034 1637..2035 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig115034.1199.1 ID=prot_H-elongata_contig115034.1199.1|Name=mRNA_H-elongata_contig115034.1199.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
TTPTTPHQPHPATFQSSSSELHLDKHVANMSGRGKGGKGLGKGGAKRHRK
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSV
TYTEHARRKTVTAMDVVYALKRQGRTLYGFGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR009072	Histone-fold
IPR035425	CENP-T/H4_C
IPR019809	Histone_H4_CS