prot_H-elongata_contig48334.11984.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48334.11984.1
Unique Nameprot_H-elongata_contig48334.11984.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length266
Homology
BLAST of mRNA_H-elongata_contig48334.11984.1 vs. uniprot
Match: D7FHB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB4_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 5.940e-135
Identity = 190/242 (78.51%), Postives = 214/242 (88.43%), Query Frame = 0
Query:    1 MTWVTAHAPKPMENIWYESKELTMKLRDVAWQGGRGAFWPPFPAVESWFRIAGDIARQRDAPLLLSVLEFKRYALRIASASALIAYNPDDYSLLVRSVYDLGVLARWTHGWSGRLSCYSSLWTPGNVGMALLGGLTLLAIRRNVASNDAVRCLLVGIASENIMARYMHDKVRAARTEELAKRYSRNQGKTCRGSGVKCVRLACEKLGLPLSSSQLDGAVAFAVGWAKEAVEGLPGNQKPRDG 242
            MTW+TAH+PKPMENIWYESKEL M L +++ Q  RGA WP FP +ESWFRIA DIARQRD+PLLLSV EFKR+ALRIAS+SAL+AYNP +Y  LV SVY+LG+LARWTHGWSGRLSCYS+LWTPGNVGMALLGGLTLL IR+NV + D+VRCLLVG+AS+ IM RY+ DKVRAART+ELA RYS N+GKTCRGSGVKCVR AC KLGLP S+SQLDGAVAFAVGWA EA+EGLPGNQ PRDG
Sbjct:  145 MTWITAHSPKPMENIWYESKELMMTLHEISGQNARGAVWPSFPGIESWFRIAKDIARQRDSPLLLSVFEFKRFALRIASSSALLAYNPGEYDNLVTSVYNLGILARWTHGWSGRLSCYSALWTPGNVGMALLGGLTLLVIRKNVVT-DSVRCLLVGMASDTIMGRYLPDKVRAARTKELAYRYSNNKGKTCRGSGVKCVRKACVKLGLPPSASQLDGAVAFAVGWAMEAIEGLPGNQAPRDG 385          
BLAST of mRNA_H-elongata_contig48334.11984.1 vs. uniprot
Match: R7QMQ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMQ2_CHOCR)

HSP 1 Score: 176 bits (445), Expect = 7.140e-49
Identity = 100/266 (37.59%), Postives = 144/266 (54.14%), Query Frame = 0
Query:    5 TAHAPKPMENIWYESKELTMKLRDVAWQGGRGAFWPP--FPAVESWFRIAGDIARQRDAPLLLSVLEFKRYALRIASASALIAYNPDDYSLLVRSVYDLGVLARWTHGWSGRLSCYSSLWTPGNVGMALLGGLTLLAIR--RNVASNDA-VRCLLVGIASENIMARYMHDKVRAARTEELAKRYSRNQGKTCRGSGVKCVRLACEKLGLPLSSSQLDGAVAFAVGWAKEAVEGLPGNQKPRDGNDHNQVEDIFCSSRAYRFTDERL 265
            T   P  M ++WY +        + A +  + + +    FP+  SW  IA D+      P+ LS      +A  +ASAS ++   P+ Y  LV  +Y+ G+ ARWT GWSG L+C++ LWT   + +A+L GL+LLA+   + V   D  VR +L G A+  +  R +  ++   R  EL +RY+   GKTCRGSGV   RLAC  L +P  +S +DG  AFA GWA E +E  PGNQKP  G  H+ VE    SS A+R+    +
Sbjct:  155 TRFPPNRMSSLWYTTARFEELYEEKAQEVRKMSEFRDVLFPSWTSWLNIAQDVGTHLSRPVYLSDSYLINFAGELASASLIVVRYPEKYRKLVDQIYEDGLDARWTFGWSGLLACFTQLWTKERIHIAMLNGLSLLALNSGQEVEHIDPNVRSMLYGYAAFAVSTRAVGKRIAEDRKVELLRRYTTESGKTCRGSGVCATRLACSILKIPAEASHMDGLPAFATGWASEYMEFKPGNQKPEHGESHDDVEMKHGSSNAWRYPHSHI 420          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48334.11984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHB4_ECTSI5.940e-13578.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
R7QMQ2_CHOCR7.140e-4937.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48334contigH-elongata_contig48334:1333..2130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48334.11984.1mRNA_H-elongata_contig48334.11984.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48334 1333..2130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48334.11984.1 ID=prot_H-elongata_contig48334.11984.1|Name=mRNA_H-elongata_contig48334.11984.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
MTWVTAHAPKPMENIWYESKELTMKLRDVAWQGGRGAFWPPFPAVESWFR
IAGDIARQRDAPLLLSVLEFKRYALRIASASALIAYNPDDYSLLVRSVYD
LGVLARWTHGWSGRLSCYSSLWTPGNVGMALLGGLTLLAIRRNVASNDAV
RCLLVGIASENIMARYMHDKVRAARTEELAKRYSRNQGKTCRGSGVKCVR
LACEKLGLPLSSSQLDGAVAFAVGWAKEAVEGLPGNQKPRDGNDHNQVED
IFCSSRAYRFTDERL*
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