prot_H-elongata_contig48281.11973.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48281.11973.1
Unique Nameprot_H-elongata_contig48281.11973.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: D7FU83_ECTSI (Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU83_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 2.540e-77
Identity = 120/151 (79.47%), Postives = 139/151 (92.05%), Query Frame = 0
Query:    1 KEREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            KER  + KELPEPL++EDLPT++ GSLGSFREG+QMLP AA KAMGK+KMRTSW M+GIKR   S+ GGY+LAFDTP+GP+R+QAKVAVCTAPAHRL+S+EGLRDIVPE +RL+EV+YPPVASVTLAYPKS+FKVDLTGFGNLIPRKMKIR
Sbjct:  257 KERARQEKELPEPLQSEDLPTYQGGSLGSFREGLQMLPNAALKAMGKDKMRTSWVMKGIKR---SEDGGYLLAFDTPKGPKRLQAKVAVCTAPAHRLASVEGLRDIVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIR 404          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A836C8C9_9STRA (Protoporphyrinogen oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C9_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.880e-49
Identity = 84/151 (55.63%), Postives = 116/151 (76.82%), Query Frame = 0
Query:    2 EREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGP-RRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            ER  + KELP PL+AEDLP +K G+LGSF++G+  LPKAAAKA+G ++MRT W    + +V +++  GY+ +F    G  RR++AKV   TAPAHRL +++G++++VPE ++LE V+YPPVASVTLAYPK AF+  L GFG+LIPRKMK+R
Sbjct:  207 ERARQEKELPAPLQAEDLPKYKGGALGSFKDGLVSLPKAAAKALGPKRMRTGWV---LSKVEKAEGEGYMCSFRLADGSVRRVKAKVVCSTAPAHRLVAVDGVKELVPEAAQLENVYYPPVASVTLAYPKEAFRAPLVGFGHLIPRKMKVR 354          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S2Y0E6_9STRA (Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.430e-36
Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 0
Query:   19 LPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            LPT+K G LGSF+ G+Q LP+A  K +G +KMRTSW M  +++  E     Y+  +DTP+G + I+AK    T PAH+L  I  ++ +VPE   L +V+YPPVASVTLAYP   F+  L GFGNLIPR  KIR
Sbjct:  262 LPTYKGGQLGSFKNGLQTLPRAVEKVLGSKKMRTSWKMVDLEKTPEET---YVATYDTPEGKKMIEAKSVTSTVPAHKLVDI--VKGVVPEAEALNKVYYPPVASVTLAYPIEEFERPLVGFGNLIPRSQKIR 389          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: W7TSK2_9STRA (Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSK2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.410e-36
Identity = 71/132 (53.79%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   20 PTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            P +K G LGSF+ G+Q +P A AKA+GKEK+R S  +  +    +   GGY   F TPQG +RI+ +    TAPAH +  +  LR +VPE +RL +V+YPPVASVTLAYPK+AF+  L GFGNLIPR MKIR
Sbjct:  393 PVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVE-GKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKL--LRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIR 521          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A4D9DG57_9STRA (Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG57_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.280e-35
Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 0
Query:   20 PTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            P +K G LGSF+ G+Q +P A AKA+GKEK+R S  +  +    +   GGY   F TPQG +R++ +    TAPAH +  +  L+ +VPE +RL +V+YPPVASVTLAYPK+AF+  L GFGNLIPR MKIR
Sbjct:  298 PVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVE-GKGPKGGYEAVFQTPQGRKRVKCQALAITAPAHVVHKL--LQPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIR 426          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A2V3IR78_9FLOR (Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR78_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 1.080e-31
Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 0
Query:   17 EDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            EDLPT+K G+LGSF++G+ MLP A  + +G +K++  W +  ++R    ++G Y   F+TP+G R I  K    T PA   +++  L+++ P +S LE+V+YPPV SV+LAYPKS FK  L GFGNLIPRK+ IR
Sbjct:  228 EDLPTWKGGALGSFKDGLAMLPNAIQRQLG-DKIKLQWRLVDVERA---ENGMYKAVFETPEGTRDITTKAIAMTTPAG--ATVRALKNLAPGISALEKVYYPPVWSVSLAYPKSEFKEPLRGFGNLIPRKLGIR 356          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: L1IES7_GUITC (Protoporphyrinogen oxidase n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IES7_GUITC)

HSP 1 Score: 127 bits (320), Expect = 1.440e-31
Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 0
Query:    2 EREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVD-----------LTGFGNLIPRKMKIR 151
            ER  EA+E  +P    +LPT+K G+LGSFR+G+  LPKAA + +G +++RTSW    ++ +++ + GGY+  F TPQG + + +K    TAPAH  +++  L ++VPE   LEE+ YP V SVTLAYPK   K +           L GFGNLIPR M IR
Sbjct:  272 ERAKEARENYDP----ELPTYKGGALGSFRKGLVSLPKAAQEKLG-DRLRTSWK---VESISKGEDGGYVTKFSTPQGSKEVWSKTVAVTAPAH--ATVGMLSELVPECKALEEIHYPCVYSVTLAYPKECLKDEVRKERPGLGKRLFGFGNLIPRSMGIR 422          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S1JXT5_9ALVE (Protoporphyrinogen oxidase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JXT5_9ALVE)

HSP 1 Score: 124 bits (310), Expect = 3.360e-30
Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    1 KEREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 151
            ++R  E KE P      DLP  K G LGSFR+G++ML +A  K MG +++RTSW +  I+R+ +   GG+   F+TP G R + AK    T PA   + +  L+D+VP+V R EE+ YPPVA+V LAYP S+ +    GFG+LIPR  KIR
Sbjct:  256 RQRAQERKENPPDA---DLPEVKPGQLGSFRDGLKMLCEAVEKRMGPQRVRTSWTVDKIERLPD---GGFRAIFNTPFGTRIVNAKALAVTTPAAATAKL--LKDMVPQVERYEEIAYPPVAAVALAYPSSSMRRRFYGFGHLIPRANKIR 398          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S0U8V8_HEMAN (Protoporphyrinogen oxidase (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8V8_HEMAN)

HSP 1 Score: 122 bits (305), Expect = 1.710e-29
Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   18 DLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVD-------------LTGFGNLIPRKMKIR 151
            ++P +K G+LGSFR+G+Q LPK   + +G+E++RT WA+  I++  +   G Y   F TP G + + A+    T+PAH   +I  L  +VPEV+RL+++ YP V SVT+AYPK AFK               L GFGNLIPR M +R
Sbjct:  284 EIPVYKGGALGSFRKGLQTLPKTVRERLGEERVRTGWAVESIQKNGD---GRYKAEFSTPDGKKTVVARSVAVTSPAHATRTI--LEGMVPEVARLDDIHYPTVTSVTVAYPKEAFKDSVRRERDILGGKKGLFGFGNLIPRSMNVR 425          
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S0L3R6_9EUKA (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L3R6_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 1.880e-29
Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 0
Query:    7 AKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFK-VDLTGFGNLIPRKMKIR 151
            A+E  +   A + PT+K+G LGSFR+G+Q +P A A  +G E++     +R + R  ESD G Y   F T  G R ++AK  V TAPAH ++ +  L ++VPE  RL +++YPPVA+VT+AYPK  FK  DL GFG+L PR   +R
Sbjct:  239 AQEKKDNPPAPEWPTYKAGELGSFRKGLQTMPNAVAAELGDERVALGHKLRAVSR--ESD-GTYTATFQTANGERVVRAKTVVSTAPAHAIADV--LAEVVPEAKRLHDIYYPPVAAVTVAYPKEDFKNPDLPGFGSLNPRTEGVR 379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU83_ECTSI2.540e-7779.47Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxI... [more]
A0A836C8C9_9STRA1.880e-4955.63Protoporphyrinogen oxidase n=1 Tax=Tribonema minus... [more]
A0A7S2Y0E6_9STRA4.430e-3651.13Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japo... [more]
W7TSK2_9STRA6.410e-3653.79Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis... [more]
A0A4D9DG57_9STRA3.280e-3552.27Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis... [more]
A0A2V3IR78_9FLOR1.080e-3147.41Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis ... [more]
L1IES7_GUITC1.440e-3144.72Protoporphyrinogen oxidase n=2 Tax=Geminigeraceae ... [more]
A0A7S1JXT5_9ALVE3.360e-3045.70Protoporphyrinogen oxidase n=2 Tax=Vitrella brassi... [more]
A0A7S0U8V8_HEMAN1.710e-2942.86Protoporphyrinogen oxidase (Fragment) n=2 Tax=Hemi... [more]
A0A7S0L3R6_9EUKA1.880e-2945.21Protoporphyrinogen oxidase (Fragment) n=1 Tax=Cocc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 25..132
e-value: 2.9E-7
score: 30.2
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 1..151
e-value: 1.7E-14
score: 55.6
NoneNo IPR availablePANTHERPTHR42923FAMILY NOT NAMEDcoord: 27..146
NoneNo IPR availablePANTHERPTHR42923:SF3PROTOPORPHYRINOGEN OXIDASEcoord: 27..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48281contigH-elongata_contig48281:232..2647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48281.11973.1mRNA_H-elongata_contig48281.11973.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48281 232..2647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48281.11973.1 ID=prot_H-elongata_contig48281.11973.1|Name=mRNA_H-elongata_contig48281.11973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
KEREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKM
RTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSI
EGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKI
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase
IPR036188FAD/NAD-bd_sf