mRNA_H-elongata_contig48281.11973.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: D7FU83_ECTSI (Protoporphyrinogen oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU83_ECTSI) HSP 1 Score: 248 bits (633), Expect = 2.540e-77 Identity = 120/151 (79.47%), Postives = 139/151 (92.05%), Query Frame = 1
Query: 1 KEREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
KER + KELPEPL++EDLPT++ GSLGSFREG+QMLP AA KAMGK+KMRTSW M+GIKR S+ GGY+LAFDTP+GP+R+QAKVAVCTAPAHRL+S+EGLRDIVPE +RL+EV+YPPVASVTLAYPKS+FKVDLTGFGNLIPRKMKIR
Sbjct: 257 KERARQEKELPEPLQSEDLPTYQGGSLGSFREGLQMLPNAALKAMGKDKMRTSWVMKGIKR---SEDGGYLLAFDTPKGPKRLQAKVAVCTAPAHRLASVEGLRDIVPEAARLDEVYYPPVASVTLAYPKSSFKVDLTGFGNLIPRKMKIR 404
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A836C8C9_9STRA (Protoporphyrinogen oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C9_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.880e-49 Identity = 84/151 (55.63%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 4 EREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGP-RRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
ER + KELP PL+AEDLP +K G+LGSF++G+ LPKAAAKA+G ++MRT W + +V +++ GY+ +F G RR++AKV TAPAHRL +++G++++VPE ++LE V+YPPVASVTLAYPK AF+ L GFG+LIPRKMK+R
Sbjct: 207 ERARQEKELPAPLQAEDLPKYKGGALGSFKDGLVSLPKAAAKALGPKRMRTGWV---LSKVEKAEGEGYMCSFRLADGSVRRVKAKVVCSTAPAHRLVAVDGVKELVPEAAQLENVYYPPVASVTLAYPKEAFRAPLVGFGHLIPRKMKVR 354
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S2Y0E6_9STRA (Protoporphyrinogen oxidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E6_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.430e-36 Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 55 LPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
LPT+K G LGSF+ G+Q LP+A K +G +KMRTSW M +++ E Y+ +DTP+G + I+AK T PAH+L I ++ +VPE L +V+YPPVASVTLAYP F+ L GFGNLIPR KIR
Sbjct: 262 LPTYKGGQLGSFKNGLQTLPRAVEKVLGSKKMRTSWKMVDLEKTPEET---YVATYDTPEGKKMIEAKSVTSTVPAHKLVDI--VKGVVPEAEALNKVYYPPVASVTLAYPIEEFERPLVGFGNLIPRSQKIR 389
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: W7TSK2_9STRA (Protoporphyrinogen oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSK2_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.410e-36 Identity = 71/132 (53.79%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 58 PTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
P +K G LGSF+ G+Q +P A AKA+GKEK+R S + + + GGY F TPQG +RI+ + TAPAH + + LR +VPE +RL +V+YPPVASVTLAYPK+AF+ L GFGNLIPR MKIR
Sbjct: 393 PVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVE-GKGPKGGYEAVFQTPQGRKRIKCQALAITAPAHVVHKL--LRPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIR 521
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A4D9DG57_9STRA (Protoporphyrinogen oxidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG57_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.280e-35 Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 58 PTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
P +K G LGSF+ G+Q +P A AKA+GKEK+R S + + + GGY F TPQG +R++ + TAPAH + + L+ +VPE +RL +V+YPPVASVTLAYPK+AF+ L GFGNLIPR MKIR
Sbjct: 298 PVYKGGQLGSFKRGLQSMPLAVAKALGKEKVRLSHKLLSVVE-GKGPKGGYEAVFQTPQGRKRVKCQALAITAPAHVVHKL--LQPLVPEAARLADVYYPPVASVTLAYPKTAFREPLRGFGNLIPRSMKIR 426
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A2V3IR78_9FLOR (Protoporphyrinogen oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR78_9FLOR) HSP 1 Score: 127 bits (319), Expect = 1.080e-31 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 49 EDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
EDLPT+K G+LGSF++G+ MLP A + +G +K++ W + ++R ++G Y F+TP+G R I K T PA +++ L+++ P +S LE+V+YPPV SV+LAYPKS FK L GFGNLIPRK+ IR
Sbjct: 228 EDLPTWKGGALGSFKDGLAMLPNAIQRQLG-DKIKLQWRLVDVERA---ENGMYKAVFETPEGTRDITTKAIAMTTPAG--ATVRALKNLAPGISALEKVYYPPVWSVSLAYPKSEFKEPLRGFGNLIPRKLGIR 356
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: L1IES7_GUITC (Protoporphyrinogen oxidase n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IES7_GUITC) HSP 1 Score: 127 bits (320), Expect = 1.440e-31 Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 4 EREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVD-----------LTGFGNLIPRKMKIR 453
ER EA+E +P +LPT+K G+LGSFR+G+ LPKAA + +G +++RTSW ++ +++ + GGY+ F TPQG + + +K TAPAH +++ L ++VPE LEE+ YP V SVTLAYPK K + L GFGNLIPR M IR
Sbjct: 272 ERAKEARENYDP----ELPTYKGGALGSFRKGLVSLPKAAQEKLG-DRLRTSWK---VESISKGEDGGYVTKFSTPQGSKEVWSKTVAVTAPAH--ATVGMLSELVPECKALEEIHYPCVYSVTLAYPKECLKDEVRKERPGLGKRLFGFGNLIPRSMGIR 422
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S1JXT5_9ALVE (Protoporphyrinogen oxidase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JXT5_9ALVE) HSP 1 Score: 124 bits (310), Expect = 3.360e-30 Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 1
Query: 1 KEREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVDLTGFGNLIPRKMKIR 453
++R E KE P DLP K G LGSFR+G++ML +A K MG +++RTSW + I+R+ + GG+ F+TP G R + AK T PA + + L+D+VP+V R EE+ YPPVA+V LAYP S+ + GFG+LIPR KIR
Sbjct: 256 RQRAQERKENPPDA---DLPEVKPGQLGSFRDGLKMLCEAVEKRMGPQRVRTSWTVDKIERLPD---GGFRAIFNTPFGTRIVNAKALAVTTPAAATAKL--LKDMVPQVERYEEIAYPPVAAVALAYPSSSMRRRFYGFGHLIPRANKIR 398
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S0U8V8_HEMAN (Protoporphyrinogen oxidase (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8V8_HEMAN) HSP 1 Score: 122 bits (305), Expect = 1.710e-29 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 52 DLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFKVD-------------LTGFGNLIPRKMKIR 453
++P +K G+LGSFR+G+Q LPK + +G+E++RT WA+ I++ + G Y F TP G + + A+ T+PAH +I L +VPEV+RL+++ YP V SVT+AYPK AFK L GFGNLIPR M +R
Sbjct: 284 EIPVYKGGALGSFRKGLQTLPKTVRERLGEERVRTGWAVESIQKNGD---GRYKAEFSTPDGKKTVVARSVAVTSPAHATRTI--LEGMVPEVARLDDIHYPTVTSVTVAYPKEAFKDSVRRERDILGGKKGLFGFGNLIPRSMNVR 425
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Match: A0A7S0L3R6_9EUKA (Protoporphyrinogen oxidase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L3R6_9EUKA) HSP 1 Score: 121 bits (304), Expect = 1.880e-29 Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 19 AKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMRTSWAMRGIKRVAESDSGGYILAFDTPQGPRRIQAKVAVCTAPAHRLSSIEGLRDIVPEVSRLEEVFYPPVASVTLAYPKSAFK-VDLTGFGNLIPRKMKIR 453
A+E + A + PT+K+G LGSFR+G+Q +P A A +G E++ +R + R ESD G Y F T G R ++AK V TAPAH ++ + L ++VPE RL +++YPPVA+VT+AYPK FK DL GFG+L PR +R
Sbjct: 239 AQEKKDNPPAPEWPTYKAGELGSFRKGLQTMPNAVAAELGDERVALGHKLRAVSR--ESD-GTYTATFQTANGERVVRAKTVVSTAPAHAIADV--LAEVVPEAKRLHDIYYPPVAAVTVAYPKEDFKNPDLPGFGSLNPRTEGVR 379 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48281.11973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48281.11973.1 >prot_H-elongata_contig48281.11973.1 ID=prot_H-elongata_contig48281.11973.1|Name=mRNA_H-elongata_contig48281.11973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp KEREVEAKELPEPLRAEDLPTFKSGSLGSFREGIQMLPKAAAKAMGKEKMback to top mRNA from alignment at H-elongata_contig48281:232..2647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48281.11973.1 ID=mRNA_H-elongata_contig48281.11973.1|Name=mRNA_H-elongata_contig48281.11973.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2416bp|location=Sequence derived from alignment at H-elongata_contig48281:232..2647+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48281:232..2647+ >mRNA_H-elongata_contig48281.11973.1 ID=mRNA_H-elongata_contig48281.11973.1|Name=mRNA_H-elongata_contig48281.11973.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig48281:232..2647+ (Himanthalia elongata Himel1 dioecious)back to top |