mRNA_H-elongata_contig48180.11965.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48180.11965.1
Unique NamemRNA_H-elongata_contig48180.11965.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.550e-52
Identity = 110/204 (53.92%), Postives = 148/204 (72.55%), Query Frame = 2 
Query:    2 GARMSAKLSQYEACDSEISLEETEEDAAITTSKSFVLKSGDELVVSVGRERFHAAEILFT----PSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDDLRNRNPLSRCSPSAVIIGAEMIMEREV-------IGGEAWFSAASWAEQPKSLMAALCPFVRD 580
            GA+ S  LS YEACDS   +++T+ D  +T +K+F LKSG EL V +GRERFHA EILFT    P LWN+ G S+ L++VV+DALA +D+DTKA+ML DIV+VGGSA ++GLGDRLEE++KAMLPE ++++VDVRVP+ D+L +RN  SR  PSAV +GAE+++E           GG+ W + A WAE P+ L  AL PF+ +
Sbjct:  902 GAQASPMLSGYEACDSRDFIDDTDTDEEVTKTKTFTLKSGSELDVKIGRERFHAPEILFTASHHPGLWNEGGVSRSLSQVVLDALAELDSDTKADMLDDIVLVGGSARMDGLGDRLEEDLKAMLPEWMSEKVDVRVPAADELNHRNRTSRGDPSAVTVGAEILLEEGAGSNDHGTKGGD-WITTAQWAETPEVLTRALVPFLSE 1104
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 6.200e-49
Identity = 107/209 (51.20%), Postives = 140/209 (66.99%), Query Frame = 2 
Query:    2 GARMSAKLSQYEACDSEISLEETEEDAAITTSKSFVLKSGDELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDDL----------------------RNRNPLSRCSPSAVIIGAEMIMEREVIGGEA------WFSAASWAEQPK 544
            GA+ S  LS YEACDS   ++ET++D  +T +K+F LKSG EL V +GRERFHA EILFTP LWN+ G S+ L++ V+DALA +D+DTKA+ML DIVVVGGSA ++GLGDRLEE++KAMLPE +++RVDVRVP+ D+L                      + RN  SR  PSAV +GAEM++E      +A      W + A WAE P+
Sbjct: 1527 GAQASPMLSGYEACDSRDFIDETDKDEEVTKTKTFTLKSGSELDVKIGRERFHAPEILFTPGLWNEGGVSRSLSQAVLDALAELDSDTKADMLDDIVVVGGSARMDGLGDRLEEDLKAMLPEWMSERVDVRVPAADELNHRFVPVMKPFLEKAEKEAAALKTRNRTSRGDPSAVTVGAEMLLEEGAGSNDAGTDGGDWITTAQWAETPE 1735
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: A0A6B2LQW8_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LQW8_9EUKA)

HSP 1 Score: 69.3 bits (168), Expect = 2.670e-10
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 2 
Query:   98 KSFVLKSGDELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDV 391
            +++ L  G   VV  G ERF   E LF PSL    G   G+ E   DA+   D D + E+ G++VVVGGSA +EGLG+RL  E+  + P   A RV V
Sbjct:    3 RAYELPDGGAFVV--GTERFRCTEPLFQPSLVGLEGG--GVHECAYDAVMRCDVDVRRELYGNVVVVGGSAGIEGLGERLRRELMMLPPSPPAVRVVV 96
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: W7TNT9_9STRA (Actin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNT9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.430e-10
Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = 2 
Query:  110 LKSGDELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDDLRNRNPLSRCSPSAVIIGAEMIMEREVIGGE 505
            LK+G+ELV+SVG ERFH  E+ F P L+ D G +  + ++VM +LA +D +    +L  +++ G S+ L GL +R+ +E+K  LP           P    + N N L        ++G  +  ER + GGE
Sbjct: 1203 LKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLP-----------PEFAGILNINHLE-----VALMGGNVEEERRIEGGE 1318
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: M9WND9_CLALS (Actin (Fragment) n=60 Tax=Saccharomycetales TaxID=4892 RepID=M9WND9_CLALS)

HSP 1 Score: 63.5 bits (153), Expect = 1.040e-7
Identity = 37/118 (31.36%), Postives = 69/118 (58.47%), Query Frame = 2 
Query:   32 YEACDSEISLEETEEDAAITTSKSFVLKSGDELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRV 385
            Y A D E  ++ + + +AI   KS+ L  G   V+++G ERF AAE LF PS  + S  + G+ +   +++   D D + ++ G+IV+ GG+    G+ +R+++EI A+ P ++  ++
Sbjct:   48 YVALDFEQEMQTSSQSSAI--EKSYELPDGQ--VITIGNERFRAAEALFRPS--DLSLEAAGIDQTTYNSIIKCDVDVRKDLYGNIVMSGGTTLFPGIAERMQKEITALAPSSMKVKI 159
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: D8LXQ7_BLAHO (Uncharacterized protein n=3 Tax=Blastocystis TaxID=12967 RepID=D8LXQ7_BLAHO)

HSP 1 Score: 65.5 bits (158), Expect = 1.830e-7
Identity = 28/88 (31.82%), Postives = 53/88 (60.23%), Query Frame = 2 
Query:  122 DELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRV 385
            D  V+ +  ERF   EILF PSL     ++ G+ + V   ++  D D + ++  ++V+ GG+   +G+GDR+++E+ A++P ++  RV
Sbjct:  242 DGKVIQINSERFRVPEILFNPSLAGRELSANGIHDAVYQTISKCDVDLRRDLYNNVVLSGGTTFFDGMGDRMQKELTALVPSSIKVRV 329
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: A0A7M3QRJ7_SPIER (Hypothetical protein n=3 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A7M3QRJ7_SPIER)

HSP 1 Score: 65.1 bits (157), Expect = 2.450e-7
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 2 
Query:   32 YEACDSEISLEETEEDAAITTSKSFVLKSGDELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRV 385
            Y A D E  ++  E  AA  T K+FVL  G   V++VG+ERF   E L  PSL    G  +GL + ++ ++   D D + +++G+I++ GGS    GL DRL+ E+  +    +  +V
Sbjct:  220 YVAVDYEAEMKAAERGAA--TEKNFVLPDGQ--VITVGKERFLCPEALLKPSLLGIEG--RGLHQTILQSVKKCDIDIRRDLMGNILLSGGSTLFPGLVDRLQNEVNHLFGSKVPAKV 331
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: UPI00148FAA59 (uncharacterized protein LOC117823778 n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FAA59)

HSP 1 Score: 65.5 bits (158), Expect = 5.100e-7
Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = 2 
Query:  122 DELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDD 412
            D  VVSVG ERF A EILF P L        G+ E +  ++   D D +   LG+IV+ GG+  L GL +RL+ EIK ++P  + K V V  P   D
Sbjct: 1615 DGQVVSVGTERFRAPEILFKPELIGRD--HYGMHESIFKSILSSDIDLRRCFLGNIVLSGGNTLLTGLPERLQAEIKGLVPSDMGKSVHVTSPKDRD 1709
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BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: A0A8C9Y8A7_SANLU (Uncharacterized protein n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9Y8A7_SANLU)

HSP 1 Score: 63.9 bits (154), Expect = 5.290e-7
Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 2 
Query:  122 DELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDD 412
            D  +V++G ERF A EILF P L        G+ E V  ++   D D +   LG+IV+ GG+  L GL +RL+ EIK +LP A+ + V V  P   D
Sbjct:  230 DGQIVTLGTERFRAPEILFKPELIGRD--HYGMHESVFKSILSSDIDLRRCFLGNIVLSGGNTLLPGLPERLQAEIKDLLPTAMGENVRVTSPKDRD 324
[Close]
BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Match: A0A8D0CZ68_SANLU (Uncharacterized protein n=2 Tax=Perciformes TaxID=8111 RepID=A0A8D0CZ68_SANLU)

HSP 1 Score: 63.9 bits (154), Expect = 5.320e-7
Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = 2 
Query:  122 DELVVSVGRERFHAAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSAALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDD 412
            D  +V++G ERF A EILF P L        G+ E V  ++   D D +   LG+IV+ GG+  L GL +RL+ EIK +LP A+ + V V  P   D
Sbjct:  230 DGQIVTLGTERFRAPEILFKPELIGRD--HYGMHESVFKSILSSDIDLRRCFLGNIVLSGGNTLLPGLPERLQAEIKDLLPTAMGENVRVTSPKDRD 324
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48180.11965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDL2_9PHAE2.550e-5253.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHM1_ECTSI6.200e-4951.20TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
A0A6B2LQW8_9EUKA2.670e-1042.86Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
W7TNT9_9STRA5.430e-1034.09Actin-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
M9WND9_CLALS1.040e-731.36Actin (Fragment) n=60 Tax=Saccharomycetales TaxID=... [more]
D8LXQ7_BLAHO1.830e-731.82Uncharacterized protein n=3 Tax=Blastocystis TaxID... [more]
A0A7M3QRJ7_SPIER2.450e-734.75Hypothetical protein n=3 Tax=Diphyllobothriidae Ta... [more]
UPI00148FAA595.100e-741.24uncharacterized protein LOC117823778 n=1 Tax=Notol... [more]
A0A8C9Y8A7_SANLU5.290e-740.21Uncharacterized protein n=1 Tax=Sander lucioperca ... [more]
A0A8D0CZ68_SANLU5.320e-740.21Uncharacterized protein n=2 Tax=Perciformes TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48180contigH-elongata_contig48180:124..3814 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.4
Seed ortholog evalue3.2e-48
Seed eggNOG ortholog2880.D7FHM1
KEGG koko:K10798,ko:K11767
KEGG Pathwayko03410,ko04210,ko04212,ko04214,ko04217,map03410,map04210,map04212,map04214,map04217
KEGG ModuleM00296
EggNOG free text desc.cytoskeleton organization
EggNOG OGsCOG5277@1,KOG0676@2759
EC2.4.2.30
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03021,ko03032,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size2617
Cds size582
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48180.11965.1prot_H-elongata_contig48180.11965.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48180 2149..3804 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930794.752474-UTR-H-elongata_contig48180:123..21481622930794.752474-UTR-H-elongata_contig48180:123..2148Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48180 124..2148 -
1691679573.3992317-UTR-H-elongata_contig48180:123..21481691679573.3992317-UTR-H-elongata_contig48180:123..2148Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48180 124..2148 -
1622930794.8421278-UTR-H-elongata_contig48180:3804..38141622930794.8421278-UTR-H-elongata_contig48180:3804..3814Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48180 3805..3814 -
1691679573.4528606-UTR-H-elongata_contig48180:3804..38141691679573.4528606-UTR-H-elongata_contig48180:3804..3814Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig48180 3805..3814 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930794.7724655-CDS-H-elongata_contig48180:2148..23171622930794.7724655-CDS-H-elongata_contig48180:2148..2317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 2149..2317 -
1691679573.4114468-CDS-H-elongata_contig48180:2148..23171691679573.4114468-CDS-H-elongata_contig48180:2148..2317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 2149..2317 -
1622930794.7888186-CDS-H-elongata_contig48180:2675..29171622930794.7888186-CDS-H-elongata_contig48180:2675..2917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 2676..2917 -
1691679573.4189777-CDS-H-elongata_contig48180:2675..29171691679573.4189777-CDS-H-elongata_contig48180:2675..2917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 2676..2917 -
1622930794.8079178-CDS-H-elongata_contig48180:3308..34351622930794.8079178-CDS-H-elongata_contig48180:3308..3435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 3309..3435 -
1691679573.4265616-CDS-H-elongata_contig48180:3308..34351691679573.4265616-CDS-H-elongata_contig48180:3308..3435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 3309..3435 -
1622930794.824051-CDS-H-elongata_contig48180:3760..38041622930794.824051-CDS-H-elongata_contig48180:3760..3804Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 3761..3804 -
1691679573.4424508-CDS-H-elongata_contig48180:3760..38041691679573.4424508-CDS-H-elongata_contig48180:3760..3804Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48180 3761..3804 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48180.11965.1

>prot_H-elongata_contig48180.11965.1 ID=prot_H-elongata_contig48180.11965.1|Name=mRNA_H-elongata_contig48180.11965.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
MSAKLSQYEACDSEISLEETEEDAAITTSKSFVLKSGDELVVSVGRERFH
AAEILFTPSLWNDSGASKGLAEVVMDALAYMDTDTKAEMLGDIVVVGGSA
ALEGLGDRLEEEIKAMLPEALAKRVDVRVPSVDDLRNRNPLSRCSPSAVI
IGAEMIMEREVIGGEAWFSAASWAEQPKSLMAALCPFVRDDSR*
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mRNA from alignment at H-elongata_contig48180:124..3814-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48180.11965.1 ID=mRNA_H-elongata_contig48180.11965.1|Name=mRNA_H-elongata_contig48180.11965.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3691bp|location=Sequence derived from alignment at H-elongata_contig48180:124..3814- (Himanthalia elongata Himel1 dioecious)
GGGGGCTAGGATGTCGGCAAAGCTGTCCCAGTACGAAGCCTGCGACTCGG
AAATGTGAGTACTACAAAAGCTACGATTATATTATGAGGTGCCTGCCTCG
AGCTACGGCTACGGCTATCGTCGCTACGGCTATCGTCTCCAGATTATGTT
GTTCAGAGCCTGGGAGTTGAGGAAACTAGGTTAATCGTCTTCTCGTGGTA
TGCTGGATTTTTCTAATCCTCGAAAACACCGGGAAATCTGGTCATCGAAA
CTAGCAACCCCGAAAAATCTGCTTGGATTAAAAAGATGTCCCTCCTTCCC
TTTGTCGTCCTCTATTTTCCCTATCTCCCCAAACTACGATTGACGATGAC
ATCACGCTTTGGACGCTTCCTCGAGCCAGCTCCCTCGAGGAGACCGAAGA
GGACGCGGCGATTACCACCTCCAAGAGCTTCGTACTGAAGTCTGGAGACG
AGCTGGTTGTGTCGGTTGGAAGGGAGCGGTTCCACGCAGCGGAGATATTG
TTCACGGTAGGTGATGCTATCAATCAATCGATCAATAATCATAATAGTAT
TACTGAATGTTTTTAGTTGTAAGAGGGTAGGTCTAACGTATGTCACACGT
TTACCGCTAGCTTTAGATCGGCAGTAGGCTCTATAAGCACGGAGTATACT
GTACCATCCGCTCCATTTGGAACCTGTCTAGTTTGTACTAGATATATTCT
CTCTCTCTCTCTCTCTGTGTCCCTGTTCTTGCCCATAGATTTGGCGCCAC
CTTGAGTATGATTAGGTTTTGTATGAATAGTTGACATTGATTGAGGCGCT
TGGTATCATTTTCCAGAATGTAACCCTTTCAATATTGCTTCTCTAAGATA
TTTTATTTCATTATTGCTTCGCGCTAACGACATCGGGGGTGTTACAGCCC
TCCCTCTGGAATGACTCGGGGGCATCAAAGGGGCTAGCGGAAGTGGTGAT
GGACGCTCTCGCCTACATGGACACGGACACTAAGGCGGAGATGCTTGGGG
ATATTGTGGTCGTGGGGGGTTCCGCGGCCCTCGAGGGGTTGGGCGACAGG
CTGGAGGAAGAAATAAAGGCGATGCTGCCAGAAGCACTAGCAAAGCGCGT
GGACGTCAGGGTGCCCTCCGTGGATGATCTGAGGAACAGGTGCGTGCGTG
CGCCATGACTGGTCGGAGTAACTCCTTTGACGATATGGCCAAATGAAGGA
ATTAATAGCCTGGACACACGATCAATCACGTGTATCACCCATTCTATAGA
GGGTGATAACTTTACGGCACGCAGGAAATGGATGACCTTTGACATGCTGT
AATACAGCTGTTCGGGTCCAACATAATGTCATCAGTGGTGGTGCGAGGGG
TAAACCATACAGTACCCATGGTTCCCCCCCCCCTCTCCAATGAGAAAGAA
ATGTATTTATTTCCTTGTCTATCACGTCTCAGATATAAGGCGTGACAATC
GCAATAAACCCTGGTTCCCGTCCGGATGCACCGCCCTTTCCCTCCAGGAA
CCCCCTCTCACGCTGCAGTCCGTCGGCCGTGATAATCGGCGCCGAGATGA
TCATGGAGAGAGAAGTCATAGGAGGGGAGGCCTGGTTCTCGGCGGCAAGC
TGGGCCGAGCAGCCTAAGTCGCTGATGGCCGCTCTCTGCCCCTTCGTACG
AGACGACAGCAGATAGAGATTGAAGAGTGATGTCAAAGAGTTACTCCTGG
TGTAGTATAATGGCGTTATCCGTCAGGGGACAAGTGGAAGGAGGCCCTTC
CCGGCAGACGCGACAGCATACATATCTCTACTAAACCCACTCTCAGACTA
AAAAAATAGTTGTTTTTTCTACAGTACAGTATGTAAATAAACGGAATAGG
GATCACACAAAACTCCTCCTGAGAAGGGGACATACGTACTGTACTGTAGT
TCAGTATCGCTCGTCAGGGGTACCAGGGGTTAGGGTACTTGGGGTAAAGG
GGAGTGTTTTACGTGAAGCGTCGTCTTGCGTTCGTGAGCGGTTCTTTGCC
AATGACGTAGCTCATTCTTGGTGGTTCTTTGATTAATTCTTGATTGTCTT
TCGAAGGCAGGCCGGGTAGGGGGGAGCATGGACGAGATAGGGGAAGAGCG
ACAAGGAGAGACACCCCCGCGTCTGTCTGCACATGCACCGTGAGATGTAA
AAATAATCCCCACACACGCACGCACACACACACGATGTGGTTTAGGGGTA
TGGTACATAACAGGGCAAAAAATGGTGTGAATGGCACTGCTTGCTGGTTG
TGGCAAAGCCTCTCGAGGTACAGGTAGTGTTGGTTTAGCCATACTCATTA
TATATGTGTATATATATACACAGGTTAGAAAATAGGGTGGAATTGGAAGG
ATTGTCCGTCGCGGAATCGTTCGCTACTGTCTTTTCAGTATTATATTGAG
CTTGTTTACATTGAAGGGGGACACACGCCGCTGGTGGGGAGAAATTTCTA
AGTTATTTATGATTTTTTCCTTTATCCCTTTTTGTGCGCCTTGTGAAGTG
AAATGGATATTTATTTAGTAGAATCCCCTCGCTGTCTCGGCAAGGTCTGC
TCTGTCATGATCCATAGCAAGTCGGGAGGGTCTTTCTAACAGAGTAAGGC
TGGACTGACCCTCGAGGAGTGATTCGTTCTTGCTGTGGCACGGCTGGCCG
AAAGGACCGCGTGTAGTGGTAGAGTTGGGTCGCATTTGGTGCGTCAGGTA
CAAATGAGTAGACTCACGAGCCTTCTGGCGACTGCGGTAGTACAGCAATT
TACGTATAATCATTCGTGCGAGGAGGCAAGCGCCACCGAAGGCTACAAGA
CGGTGTATGGCTCTAGTATTTCGTGGAGTGAGCTTCATTTCGTATATTAG
TAGAGGCCGGGATTCGCCGCCACAGGAGGAGGGAGACGGACTGCGACGAG
CTGGTTGGGAATTGGTTGCAACCTTCCAGCGTGAGGACTTTTTTTAAATA
TAAAGACCAGAGCCTTGAGTGCAGCGAGGGAGAAAGTGAGGAACTACCTG
GGAAGGAGCAGCAACGAGAGCGTGTGTACGGAGCGTGTCGAGAGTGGCGG
TGAAGGACGATATCACCCTCGAGATGGACACAGCATGTCTTTACAAACTA
TTTCGTTTTTCTGTTTTTTGGGGGGGCGGGTCTGCGAGGCTACGTCACTG
GTTTTATAGAGACGTGGAAGAAATGCCTGCGCGCACACTCGGGGCCTGCA
TTATTGTTGCTTGCCCGTATCGTGGAAGAACTACACTTCATTTTGGAACG
ATACACCTGATCAGTATCACTATTCGCGCTGTGCCCATCACAGACGGTTC
AAGAAAATACTTTTGTTGGCTGTTCCTTTTTTCACTGCGTGTCCACGATG
TATGGTCATCTTTGACAGCACTTCAGACAGTAGATGTGCTCATTCATTTC
AAACGACTACCGTGTTTTGGTACGGTGCTGGCAGCACTCCAGACAGCAAC
TTTGCGGTAGTCAGTAACCATTTATTTGGTTGGTTGTGGGAACGGGGGGG
AGCGTAATGCTGTAGTCGAATGGATTCCGTGGATGTGTTCAGTTTGAACA
CACACCAACAGTAGGAAATTAGGTGTACCTCTTTCTGTCTTATGCCTTTT
TTACTCATGTTTTGTTTTACCTTCCTAGTCTCCAGCACGTTTTTTACCAC
GGGTTCTAGATTTTCGAAAAATAGCTAAATGATAATGGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig48180:124..3814-

>mRNA_H-elongata_contig48180.11965.1 ID=mRNA_H-elongata_contig48180.11965.1|Name=mRNA_H-elongata_contig48180.11965.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig48180:124..3814- (Himanthalia elongata Himel1 dioecious)
ATGTCGGCAAAGCTGTCCCAGTACGAAGCCTGCGACTCGGAAATATGTCG
GCAAAGCTGTCCCAGTACGAAGCCTGCGACTCGGAAATCTCCCTCGAGGA
GACCGAAGAGGACGCGGCGATTACCACCTCCAAGAGCTTCGTACTGAAGT
CTGGAGACGAGCTGGTTGTGTCGGTTGGAAGGGAGCGGTTCCACGCAGCG
GAGATATTGTTCACGCTCCCTCGAGGAGACCGAAGAGGACGCGGCGATTA
CCACCTCCAAGAGCTTCGTACTGAAGTCTGGAGACGAGCTGGTTGTGTCG
GTTGGAAGGGAGCGGTTCCACGCAGCGGAGATATTGTTCACGCCCTCCCT
CTGGAATGACTCGGGGGCATCAAAGGGGCTAGCGGAAGTGGTGATGGACG
CTCTCGCCTACATGGACACGGACACTAAGGCGGAGATGCTTGGGGATATT
GTGGTCGTGGGGGGTTCCGCGGCCCTCGAGGGGTTGGGCGACAGGCTGGA
GGAAGAAATAAAGGCGATGCTGCCAGAAGCACTAGCAAAGCGCGTGGACG
TCAGGGTGCCCTCCGTGGATGATCTGAGGAACAGCCCTCCCTCTGGAATG
ACTCGGGGGCATCAAAGGGGCTAGCGGAAGTGGTGATGGACGCTCTCGCC
TACATGGACACGGACACTAAGGCGGAGATGCTTGGGGATATTGTGGTCGT
GGGGGGTTCCGCGGCCCTCGAGGGGTTGGGCGACAGGCTGGAGGAAGAAA
TAAAGGCGATGCTGCCAGAAGCACTAGCAAAGCGCGTGGACGTCAGGGTG
CCCTCCGTGGATGATCTGAGGAACAGGAACCCCCTCTCACGCTGCAGTCC
GTCGGCCGTGATAATCGGCGCCGAGATGATCATGGAGAGAGAAGTCATAG
GAGGGGAGGCCTGGTTCTCGGCGGCAAGCTGGGCCGAGCAGCCTAAGTCG
CTGATGGCCGCTCTCTGCCCCTTCGTACGAGACGACAGCAGATAGGAACC
CCCTCTCACGCTGCAGTCCGTCGGCCGTGATAATCGGCGCCGAGATGATC
ATGGAGAGAGAAGTCATAGGAGGGGAGGCCTGGTTCTCGGCGGCAAGCTG
GGCCGAGCAGCCTAAGTCGCTGATGGCCGCTCTCTGCCCCTTCGTACGAG
ACGACAGCAGATAG
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