mRNA_H-elongata_contig48088.11948.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: D8LL94_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL94_ECTSI) HSP 1 Score: 398 bits (1022), Expect = 1.060e-130 Identity = 208/277 (75.09%), Postives = 244/277 (88.09%), Query Frame = 1
Query: 1 EAGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHP-GRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDSAPHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDLRLREVKK-DAILLQGGR 825
+ GVIPRAVS +LADA ARR QGWEF LTAT+VEIY+E+IRDLL+P+ND+L+V EHP GRGVEAAGA EV++++L+EA+ VL++G+ HR TAAT+MN SSRSHSIFMLRL+Q ++V +CKVS RLTLVDLAGSERAGK G EG+ LEEA+SINVSLHTLGRVIR LS++ PHVPFRDSKLTRLLQESLGGNSRT LI+CCSP+EA A+ETLSTL FGECAKRVTTFASANVVAAPD+V+ QLSELR EVVRLKRQLHD +LRE ++ +A GGR
Sbjct: 68 QVGVIPRAVSTLLADAEARRAQGWEFALTATYVEIYNEKIRDLLNPANDNLQVKEHPSGRGVEAAGAKEVRVTSLEEAVGVLKKGAEHRATAATLMNNVSSRSHSIFMLRLDQRDVVHDCKVSARLTLVDLAGSERAGKTGAEGKRLEEANSINVSLHTLGRVIRTLSENGPHVPFRDSKLTRLLQESLGGNSRTVLIICCSPDEAQAQETLSTLKFGECAKRVTTFASANVVAAPDKVSQQLSELRAEVVRLKRQLHDCQLREARRSEAFPSIGGR 344
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6H5KQA5_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA5_9PHAE) HSP 1 Score: 369 bits (948), Expect = 1.780e-115 Identity = 202/277 (72.92%), Postives = 235/277 (84.84%), Query Frame = 1
Query: 1 EAGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHP-GRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDSAPHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDLRLREVKK-DAILLQGGR 825
E GVIPRAVS +LADA ARR QGWEF LTAT+VEIY+E+IRDLL+P+ND+L+V EHP GRGVEAAGA EV++++L+EA+ VL++G+ HR TAAT+MN SSRSHSIFMLRL+Q +CKVS RLTLVDLAGSERAGK G+EG+ LEEA+SINVSLHTLGRVIR LS++ PHVPFRDSKLTRLLQESLGGNSR P+EA A+ETLSTL FGECAKRVTTFASANVVAAPD+V+ QLSELR EVVRLKRQLHD +LRE ++ +A GGR
Sbjct: 393 EVGVIPRAVSTLLADAEARRAQGWEFALTATYVEIYNEKIRDLLNPANDNLQVKEHPSGRGVEAAGAKEVRVTSLEEAVGVLKKGAEHRATAATLMNNVSSRSHSIFMLRLDQ-----DCKVSARLTLVDLAGSERAGKTGVEGKRLEEANSINVSLHTLGRVIRTLSENGPHVPFRDSKLTRLLQESLGGNSR--------PDEAQAQETLSTLKFGECAKRVTTFASANVVAAPDKVSQQLSELRAEVVRLKRQLHDCQLREARRSEAFPSIGGR 656
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A8K0RHM3_9PLEO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Paraphoma chrysanthemicola TaxID=798071 RepID=A0A8K0RHM3_9PLEO) HSP 1 Score: 211 bits (538), Expect = 3.690e-63 Identity = 123/241 (51.04%), Postives = 154/241 (63.90%), Query Frame = 1
Query: 7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQL 726
GVIPR V +V A A E+ + +++EIY ERIRDLL P ND+L V E RGV G EV +++ DE +VLR G + R +AT MN SSRSHSIF++ + Q N+ + SG+L LVDLAGSE+ GK G G+ LEEA IN SL LG VI L+D + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP + ETLSTL FG AK + A N +P E+ A L
Sbjct: 109 GVIPRIVQQVFASILAS-PSNIEYTVRVSYMEIYMERIRDLLMPQNDNLPVHEEKNRGVYVKGLLEVYVASDDEVYEVLRRGGAARAVSATNMNAESSRSHSIFVVTVSQKNVETGSQKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINSLTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKINAELSPAELKAML 348
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A1Y2D7F0_9FUNG (Kinesin-like protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2D7F0_9FUNG) HSP 1 Score: 208 bits (530), Expect = 1.200e-62 Identity = 120/254 (47.24%), Postives = 166/254 (65.35%), Query Frame = 1
Query: 7 GVIPRAVSKV---LADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRL 756
GVIPR + + + DA + E F + +F+EIY ERIRDLL+PSND+L + E RGV G EV +S++ E ++V+R G++ R+ A T MN SSRSHSIF++ + Q +L + SG++ LVDLAGSE+ GK G G+ LEEA IN SL LG VI L+D + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP + ETLSTL FG AK + A N + E+ A L+++++++ +
Sbjct: 13 GVIPRIIEAIFTTIMDAPSTIE----FTVKVSFMEIYMERIRDLLNPSNDNLPIHEEKNRGVYVKGLLEVYVSSVQEVMEVMRRGTASRVVAFTNMNAESSRSHSIFVVTVNQKDLTNGTQKSGKIYLVDLAGSEKVGKTGATGQTLEEAKKINKSLSALGMVINALTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSFNDTETLSTLRFGIRAKTIKNKAKINQELSVAELKALLTKVKKKLASM 262
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: M2V0T4_COCH5 (Kinesin-like protein (Fragment) n=2 Tax=Cochliobolus heterostrophus TaxID=5016 RepID=M2V0T4_COCH5) HSP 1 Score: 213 bits (543), Expect = 1.730e-62 Identity = 125/248 (50.40%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEV 747
GVIPR V ++ A+ A E+ + +++EIY ERIRDLL P ND+L V E RGV G EV +S+ +E +VLR G S R +AT MNQ SSRSHSIF++ + Q N+ SG+L LVDLAGSE+ GK G G+ LEEA IN SL LG VI L+DS H+P+RDSKLTR+LQESLGGNSRT LI+ CSP + ETL TL FG AK + A N +P E+ A L +++ +V
Sbjct: 101 GVIPRIVQQIFANILAS-PSNIEYTVRVSYMEIYMERIRDLLVPQNDNLPVHEEKSRGVYVKGLLEVYVSSEEEVYEVLRRGGSARAVSATNMNQESSRSHSIFVITVNQKNVETGSLKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINCLTDSKTQHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDVETLGTLRFGMRAKTIKNKAKVNAELSPAELKAMLKKVQGQV 347
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6A7C9S8_9PEZI (Kinesin-like protein n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7C9S8_9PEZI) HSP 1 Score: 220 bits (561), Expect = 1.910e-62 Identity = 126/258 (48.84%), Postives = 167/258 (64.73%), Query Frame = 1
Query: 7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
G+IPR +S+ + D+ AR + EFV+ +++EIY E+IRDLL P ND+L V E RGV G E + ++ E +VL G R+ AAT MNQ SSRSHSIF++ + Q N+ SGRL LVDLAGSE+ GK G G+ LEEA IN SL LG VI L+D + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP + ET+STL FGE AK + A N +P ++ A L + + +VV ++ +H L
Sbjct: 107 GIIPR-ISEQIFDSIARADSNIEFVVKVSYMEIYMEKIRDLLVPQNDNLPVHEDKQRGVYVKGLQEFYVGSVGEVYEVLDRGGQARVVAATNMNQESSRSHSIFLIEVMQKNIETGAARSGRLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALADGRSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETISTLRFGERAKTIKQKAKINEELSPAQLKALLKQAQTQVVSFEQYIHSL 363
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: D3B313_POLPP (Kinesin family member 3 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B313_POLPP) HSP 1 Score: 219 bits (558), Expect = 1.400e-61 Identity = 127/258 (49.22%), Postives = 167/258 (64.73%), Query Frame = 1
Query: 7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
GVIPR ++ V D + ++ EF++ A+++EIY ERIRDLLD D+LKV E G+GV G TEV I D+ L+V+R G ++R A T MN SSRSHSIF+L ++Q NL SG+L LVDLAGSE+ K G +G L+EA IN SL +LG VI L+D + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP + ETLSTL FG AK + A N + E+ LS+ +E+ LK + +L
Sbjct: 106 GVIPRMINTVF-DCITKADENIEFIVKASYIEIYMERIRDLLDVRKDNLKVREEKGKGVWVDGTTEVYIYREDDILEVMRAGQANRAIAETKMNAESSRSHSIFILTIQQKNLKEGSNKSGKLYLVDLAGSEKIAKTGAQGLTLDEAKMINKSLSSLGNVINALTDGKSTHIPYRDSKLTRVLQESLGGNSRTTLIINCSPSSYNETETLSTLRFGNRAKSIKNKAKINQERSAAELKILLSKAEKEIESLKDYIKEL 362
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6A6QR82_9PEZI (Kinesin-like protein n=1 Tax=Lophium mytilinum TaxID=390894 RepID=A0A6A6QR82_9PEZI) HSP 1 Score: 218 bits (556), Expect = 1.660e-61 Identity = 125/258 (48.45%), Postives = 165/258 (63.95%), Query Frame = 1
Query: 7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
GVIPR V+++ A + EF++ +++EIY ERIRDLL P ND+L V E RGV G EV ++++DE +VLR G R AAT MNQ SSRSHSIF++ ++Q N+ G+L LVDLAGSE+ GK G G+ LEEA IN SL LG VI L+D + HVP+RDSKLTR+LQESLGGNSRT LI+ CSP + +ETL TL FG AK + A N +P E+ QL +++ +V + + +L
Sbjct: 108 GVIPRIVNQIFASIMSSGSN-MEFMVQVSYMEIYMERIRDLLAPQNDNLPVHEDKTRGVYVKGLLEVYVTSVDEVYEVLRRGGMARAVAATNMNQESSRSHSIFVITIQQKNVETGSAKRGQLFLVDLAGSEKIGKTGASGQTLEEAKKINKSLSALGMVINSLTDGKSTHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDQETLGTLRFGVRAKSIKNKAKVNAELSPQELKMQLKKIQSQVTTFESYISNL 364
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A812NKF6_9DINO (Kinesin-like protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NKF6_9DINO) HSP 1 Score: 206 bits (525), Expect = 3.260e-61 Identity = 122/246 (49.59%), Postives = 164/246 (66.67%), Query Frame = 1
Query: 4 AGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRG-VEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSEL 735
AG+IPR V+++ A+A E EF + +FVEIY ERIRDLLDPS D+L+V E P +G V TEV +++++E L+V+ G+++R AAT MN SSRSHSIF++ L Q + +GRL L DLAGSE K G++G+ L+EA +IN SL LG VI L+D HVP+RDSKLTR+LQESLGGNSRT+LI+ SP + ETLSTL FG+ AK + A+ N P+E+ ++ L
Sbjct: 94 AGIIPRVVNQIFEFASAADETV-EFTVQVSFVEIYLERIRDLLDPSKDNLQVGEDPAQGGVYIKHVTEVYVTSVEEMLEVMERGNANRAVAATGMNAGSSRSHSIFVVALTQKDSAAGETKTGRLYLCDLAGSETVNKTGVQGQQLKEAQNINKSLSALGNVINALTDGRTKHVPYRDSKLTRVLQESLGGNSRTSLIINASPAAYNQMETLSTLRFGKRAKSIKNKATINKRRTPEEMERYIAVL 338
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Match: A0A6A5W984_9PLEO (Kinesin-like protein n=1 Tax=Amniculicola lignicola CBS 123094 TaxID=1392246 RepID=A0A6A5W984_9PLEO) HSP 1 Score: 217 bits (552), Expect = 3.840e-61 Identity = 124/258 (48.06%), Postives = 164/258 (63.57%), Query Frame = 1
Query: 7 GVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSLKVTEHPGRGVEAAGATEVQISTLDEALDVLREGSSHRMTAATMMNQASSRSHSIFMLRLEQHNLVRNCKVSGRLTLVDLAGSERAGKAGLEGRHLEEASSINVSLHTLGRVIRKLSDS-APHVPFRDSKLTRLLQESLGGNSRTALIVCCSPEEAHARETLSTLTFGECAKRVTTFASANVVAAPDEVAAQLSELREEVVRLKRQLHDL 777
G+IPR V ++ A A E+ + +++EIY ERIRDLL+P+ND+L V E RGV G EV +S++ E +V+R G + R AAT MNQ SSRSHSIF++ + Q NL SG+L LVDLAGSE+ GK G G+ LEEA IN SL LG VI L+D + H+P+RDSKLTR+LQESLGGNSRT LI+ CSP +A ET+ TL FG AK + A N +P E+ A L + + +V + + +L
Sbjct: 54 GIIPRIVEQIFASMLAS-PSNIEYTVRVSYMEIYMERIRDLLNPANDNLPVHEEKNRGVYVKGLLEVYVSSVMEVYEVMRRGGNARAVAATNMNQESSRSHSIFVVTITQKNLETGSMKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINSLTDGRSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNAEETIGTLRFGMRAKTIKNKAKVNAELSPAELKALLKKAQSQVTNFESYIANL 310 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48088.11948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48088.11948.1 >prot_H-elongata_contig48088.11948.1 ID=prot_H-elongata_contig48088.11948.1|Name=mRNA_H-elongata_contig48088.11948.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp EAGVIPRAVSKVLADANARREQGWEFVLTATFVEIYSERIRDLLDPSNDSback to top mRNA from alignment at H-elongata_contig48088:863..3539+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48088.11948.1 ID=mRNA_H-elongata_contig48088.11948.1|Name=mRNA_H-elongata_contig48088.11948.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2677bp|location=Sequence derived from alignment at H-elongata_contig48088:863..3539+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48088:863..3539+ >mRNA_H-elongata_contig48088.11948.1 ID=mRNA_H-elongata_contig48088.11948.1|Name=mRNA_H-elongata_contig48088.11948.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig48088:863..3539+ (Himanthalia elongata Himel1 dioecious)back to top |