prot_H-elongata_contig1149.1190.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1149.1190.1
Unique Nameprot_H-elongata_contig1149.1190.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1033
Homology
BLAST of mRNA_H-elongata_contig1149.1190.1 vs. uniprot
Match: D8LDP3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP3_ECTSI)

HSP 1 Score: 682 bits (1759), Expect = 8.790e-222
Identity = 524/1124 (46.62%), Postives = 610/1124 (54.27%), Query Frame = 0
Query:    1 VETEETSDLVDTDDLSALGGXXXXXXXXXXXIFGQAPRGLHGCVAVILPRTTALTRSMDAPGKKSPVARTSR---------RRDLVRSPSRR----RDMGM---GGGSIGVYSTSFP---PPKS----------RMIRRFRTKVRQMRHVVAARVLQDTPARNTGGGTPSVP------------GGEGVPAAREPDLLAGMASDDTDYQKVRSRLNGQILELIAADVTEWLPRYCLPSAIARVHTSHGGRKVR-LSLLLLSKPIAGGGGGTKTGSPREASQSCDAT-------NSGKEEKDIDVDLVQPRVHHFVMTVPRKRQSPPASPAPIGLPPDSSQRGTREPRGNFGDRANNSHHPGNISGYGQKAPFNNVFGPSRHASSRRWG-TRPVKGSFPLAIDRESNLVLHAACATVWQKVERKPQRNEEKXXXXXXLQWMKGXXXXXXXXXXXXXXXEIETTAYVPRCVCALSFDPLFDTLRAVALARGGFPEAGRALMLGGGGRIGAGGSPAGFGGVSGRTEGLEDL------------------------------EAGM-LRWGLGDAATLQAAPPPLPILSPPTRPAAPTLPTVFSPATRIPAAGSESAVFSSRAPPLVQSLSAPESLGGWS------VESDESG-WAGSVGMAEAATAAADKTSSQADESRSSRERWSSFGLPPLVPLDHPVEPLFQALSSDNVLLTLSALVCERPVVVTCSVRSLLSVAVSSLKTLLHPLGWHHAYAPLLPATEIIGFWRSKLLLDKRAAMSQGRSGSPPRITPHQWGSSPGXXXXXXXXXXXXXLLIRPTPN-RAVPQPRFRPQTAFLVGLEGEVVRMACGKPRGVFANGAEGSKESGGGGDSGAEVWGVVSSESCMVPPNAE--VYAMGVAATQPSPALLETVRAMLKQSVHVDLDYDEVTWPPPVPPAVSPEDADVASRPNHGGKGGVGGGSFXXXXXEFRXXXXXXXXXXSTGGGLENDGAPPVWPEEAARRAKRVIQSTLFPEFEDFDLVSPTPPETSELGAEDDSALFKCSRSAGGGAEVSLRDKIQACRNSSTPVRDRFRAGVRGVVSRMTESVVGMYAPTPADLALRAAAAGLVASVLGRVKEFTTLFAQ 1033
            V+TEE +D  D DD +               I GQAPRGLHG  A+     T    S D+  K++    T+          RR  VRSP R     R  G    G G +   + S P   PP +          R++RRFRTKVRQMRHV+AARVLQD P R TGGG PSVP            G  G     + +LLAGMAS DT+Y +VRSRLNGQILEL+AA+VTE LPRYCLPSAIARV     G K R L  + LS PI                             + G+       + + PRVHHFVMTVPRKR SP  SP  +G P   S+  T    G  G         G               G +R  S RRW   +  +G+FP AIDR+SN+VLH AC TVW+K +      +E         W +                  +TTAYVPRCVCALSFDPLFDTLRAVALARGG PE  RALM+G GG           GGV                                        +AG+ L WGLGDAATL+A  PPLPIL PP     PTLP+VF+P+    A G ++A    + PPLVQS SAP+S+GGWS        ++E G W G         A   ++  +           S+FGLPPLVPLDHPVEPLFQALSSDNVLL LSAL+CERPV+VTCSVRSLLS+AVSSLK LLHPL WHHAYAPLLPA E+         LDK+ A++ G SGSPPR+TP  WG  P          XXXX     TP  RA P         FLVGL+GE+VRMA  K  G       G    G       EVWGV SSE+CMVP  AE    A G+A TQPSPALLE VR M+KQSVHVDLD+D++TWPPP  P   P +         G  GG           E  XXXXXXXXXX         GAPPVWPEEAARRA+RV++STLFP+FE FD+V        +L  +DDSALFKCS  +GGG E SLRDK++ACR S+       R GV G    +TES+VGMY PT ADLALRAA AGLVASVLGRVKEFTTLFAQ
Sbjct:  245 VDTEEATDGEDNDDDTGPPAPAPSGAKGGT-ILGQAPRGLHGVAAIA---ATPAPGSPDSATKRAAATATAALPMKGRGQGRRGSVRSPPRPSGPPRAYGSPTDGAGRMASPARSSPQGVPPGAGEXXXXXXXGRLLRRFRTKVRQMRHVIAARVLQDMPPRKTGGGDPSVPRSDSAWGWDGEEGEGGEDELEDVELLAGMASSDTNYAEVRSRLNGQILELMAANVTEALPRYCLPSAIARVEAKKPGEKKRTLPKVDLSFPITFSSXXXXXXXXXXXXXXXXXXXXXXXLRHHGERGDGEAAEAMLPRVHHFVMTVPRKRSSPSVSPR-VGSP---SRMSTGRGGGGEGSXXXXREGAGXXXXXXXXXXXXRK-GVNRQESDRRWAIAKATQGTFPAAIDRDSNIVLHGACLTVWRKAD--SDEGDEGDL------WGRDSDDDDEEDGA-----RAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRGG-----------GGVELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAGLRLEWGLGDAATLKAGRPPLPILPPPPPTPGPTLPSVFAPSLSRDAGG-DAARTLRKPPPLVQSNSAPDSMGGWSSTGEGGYSTEEEGPWRGXXXXXXXXXAIGGRSGDRIAGG------LSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEVA--------LDKKTALNHGGSGSPPRLTPGSWG--PSGRGGRGSPGXXXXXXXXXTPRVRATP---------FLVGLDGELVRMAMRKGGGSGKGVKAGPAGPG-------EVWGVASSEACMVPEGAEEEAGASGIATTQPSPALLEVVRCMVKQSVHVDLDHDDITWPPPQAPDTPPAE--------EGEGGGTAKTDSLGSGKEXXXXXXXXXXXXXXXXXXXXVGAPPVWPEEAARRARRVVKSTLFPDFETFDVVD-------DLDXDDDSALFKCSGLSGGGVEASLRDKVEACRTSAAAA-SAPRRGVSGGAGTLTESIVGMYIPTTADLALRAAVAGLVASVLGRVKEFTTLFAQ 1286          
BLAST of mRNA_H-elongata_contig1149.1190.1 vs. uniprot
Match: A0A6H5JQ29_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ29_9PHAE)

HSP 1 Score: 602 bits (1553), Expect = 1.170e-196
Identity = 429/922 (46.53%), Postives = 499/922 (54.12%), Query Frame = 0
Query:  160 MASDDTDYQKVRSRLNGQILELIAADVTEWLPRYCLPSAIARVHTSHGGRKVR-LSLLLLSKPIAGGGGGTKTGSPREASQSCDAT----------NSGKEEKDIDVDLVQPRVHHFVMTVPRKRQSPPASPAPIGLPPDSSQRGTREPRGNFGDRANNSHHPGNISGYGQKAPFNNVFGPSRHASSRRWG-TRPVKGSFPLAIDRESNLVLHAACATVWQKVERKPQRNEEKXXXXXXLQWMKGXXXXXXXXXXXXXXXEIETTAYVPRCVCALSFDPLFDTLRAVALARGGFPEAGRALMLGGGGRIGAGGSPAGFGGVSGRTEGLEDL-------------------------------EAGM-LRWGLGDAATLQAAPPPLPILSPPTRPAAPTLPTVFSPATRIPAAGSESAVFSSRAPPLVQSLSAPESLGGWSVESDESGWAGSVGMAEAATAAADKTSSQADESRSSRERW-SSFGLPPLVPLDHPVEPLFQALSSDNVLLTLSALVCERPVVVTCSVRSLLSVAVSSLKTLLHPLGWHHAYAPLLPATEIIGFWRSKLLLDKRAAMSQGRSGSPPRITPHQWGSSPGXXXXXXXXXXXXXLLIRPTPNRAVPQPRFRPQTAFLVGLEGEVVRMACGKPRGVFANGAEGSKESGGGGDSGAEVWGVVSSESCMVPPNAE--VYAMGVAATQPSPALLETVRAMLKQSVHVDLDYDEVTWPPPVPPAVSPEDADVASRPNHGGKGGVGGGSFXXXXXEFRXXXXXXXXXXSTGGGLENDGAPPVWPEEAARRAKRVIQSTLFPEFEDFDLVSPTPPETSELGAEDD-SALFKCSRSAGGGAEVSLRDKIQACRNSSTPVRDRFRAGVRGVVSRMTESVVGMYAPTPADLALRAAAAGLVASVLGRVKEFTTLFAQ 1033
            MAS DT+Y +VRSRLNGQILEL+AA+VTE LPRYCLPSAIARV     G K R L  + LS PI      +                         + G+       + + PRVHHFVMTVPRKR              D S++G                                    +   S RRW   +  +G+FP AIDR+SN+VLH AC TVW+K +     ++E         W +   XXXX           +TTAYVPRCVCALSFDPLFDTLRAVALARGG PE  RALM+G GG           GGV                                         +AGM L WGLGDAATL+A  PPLPIL PP     PTLP++F+P+    A G  + +  +  PPLVQS SAP+S+GGWS   +                                    S+FGLPPLVPLDHPVEPLFQALSSDNVLL LSAL+CERPV+VTCSVRSLLS+AVSSLK LLHPL WHHAYAPLLPA E++ FWRSK+ LDK+ A++ GRSGSPPRITP  WG+S                   P P      PR R  T FLVGL+GE+VRMA                   GGG     VWGV SSE CMVP  AE    A G+A TQPSPALLE VR ++KQSVHVDLD+D++TWPPP  P   P  A             +G G      XE           X         G P VWPEEAARRA+RV+QSTLFP+FE FD+VS TPP+  +       SALFKCS  +GGGAE SLRDK++ACR S+       R G+ G    +TES+VGMY PT ADLALRAA AGLVASVLGRVKEFTTLFAQ
Sbjct:    1 MASSDTNYAEVRSRLNGQILELMAANVTEALPRYCLPSAIARVEAKKPGEKKRALPKVDLSFPITFSSSSSLXXXXXXXXXXXXXXXXXLPLPPLPHHGERGDGEAAEAMLPRVHHFVMTVPRKRTGGXXX-XXXXXXXDGSRKGV-----------------------------------NLQESERRWAIAKATQGTFPAAIDRDSNIVLHGACLTVWRKAD--SDEDDEGDL------WGRDSDXXXXEDGT-----RAKTTAYVPRCVCALSFDPLFDTLRAVALARGGHPETARALMVGRGG-----------GGVELSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKAGMRLEWGLGDAATLKAGRPPLPILPPPPPNPGPTLPSLFAPSLSREAGGDATGMLRNP-PPLVQSNSAPDSMGGWSFTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAFGLPPLVPLDHPVEPLFQALSSDNVLLALSALMCERPVLVTCSVRSLLSLAVSSLKALLHPLDWHHAYAPLLPAAEVVSFWRSKVALDKKTALNHGRSGSPPRITPGSWGAS------GRGGRGSPGXXXXPPPT-----PRVR-ATPFLVGLDGELVRMAMRN----------------GGGSGKGVVWGVASSEPCMVPEGAEEEAGASGIATTQPSPALLEVVRCIVKQSVHVDLDHDDITWPPPQAP--DPSTAXXXXXXXXSKTDSLGSGKEKKKGXE-EAAGATGDEGXXXXXXXXXVGVPLVWPEEAARRARRVVQSTLFPDFETFDVVSETPPQVDDFDXXXXXSALFKCSGLSGGGAEASLRDKVEACRTSAAAA-SASRRGISGGAGTLTESIVGMYIPTAADLALRAAVAGLVASVLGRVKEFTTLFAQ 829          
BLAST of mRNA_H-elongata_contig1149.1190.1 vs. uniprot
Match: A0A6H5JUK7_9PHAE (RGS domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK7_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.800e-11
Identity = 60/141 (42.55%), Postives = 72/141 (51.06%), Query Frame = 0
Query:   32 IFGQAPRGLHGCVAVILPRTTALTRSMDAPGKKSPVARTSR---------RRDLVRSPSRRRD--MGMGGGSIGVYSTSFP--------PPKS----------RMIRRFRTKVRQMRHVVAARVLQDTPARNTGGGTPSVP 143
            I GQAPRGLHG  A+     T +  S D+  K++  A T+          RR  VRSP R        G  + G    + P        PP +          R++RRFRTKVRQMRHV+AARVLQD P R TGGG PSVP
Sbjct:  526 ILGQAPRGLHGVAAIA---ATPVPGSPDSATKRAAAAATAALPVEGRGQGRRGFVRSPPRPSGPPRAYGSPTDGAARKASPTRSSPQGVPPGAGEXXXXXXXXRLLRRFRTKVRQMRHVIAARVLQDMPPRKTGGGNPSVP 663          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1149.1190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDP3_ECTSI8.790e-22246.62RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ29_9PHAE1.170e-19646.53DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUK7_9PHAE1.800e-1142.55RGS domain-containing protein (Fragment) n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001194cDENN domainSMARTSM00799DENN_clscoord: 414..686
e-value: 8.6E-5
score: 8.4
IPR001194cDENN domainPFAMPF02141DENNcoord: 596..671
e-value: 6.8E-11
score: 42.5
NoneNo IPR availableGENE3D3.40.50.11500coord: 600..676
e-value: 1.9E-13
score: 52.3
NoneNo IPR availablePANTHERPTHR12296:SF21DENN DOMAIN-CONTAINING PROTEIN 3coord: 605..670
coord: 257..432
NoneNo IPR availablePANTHERPTHR12296C-MYC PROMOTER BINDING PROTEINcoord: 605..670
coord: 257..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1149contigH-elongata_contig1149:154..15561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1149.1190.1mRNA_H-elongata_contig1149.1190.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1149 154..15561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1149.1190.1 ID=prot_H-elongata_contig1149.1190.1|Name=mRNA_H-elongata_contig1149.1190.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1033bp
VETEETSDLVDTDDLSALGGGGRGSGGGGGGIFGQAPRGLHGCVAVILPR
TTALTRSMDAPGKKSPVARTSRRRDLVRSPSRRRDMGMGGGSIGVYSTSF
PPPKSRMIRRFRTKVRQMRHVVAARVLQDTPARNTGGGTPSVPGGEGVPA
AREPDLLAGMASDDTDYQKVRSRLNGQILELIAADVTEWLPRYCLPSAIA
RVHTSHGGRKVRLSLLLLSKPIAGGGGGTKTGSPREASQSCDATNSGKEE
KDIDVDLVQPRVHHFVMTVPRKRQSPPASPAPIGLPPDSSQRGTREPRGN
FGDRANNSHHPGNISGYGQKAPFNNVFGPSRHASSRRWGTRPVKGSFPLA
IDRESNLVLHAACATVWQKVERKPQRNEEKEKEDEELQWMKGGGDRSRRM
RRRESEEEIETTAYVPRCVCALSFDPLFDTLRAVALARGGFPEAGRALML
GGGGRIGAGGSPAGFGGVSGRTEGLEDLEAGMLRWGLGDAATLQAAPPPL
PILSPPTRPAAPTLPTVFSPATRIPAAGSESAVFSSRAPPLVQSLSAPES
LGGWSVESDESGWAGSVGMAEAATAAADKTSSQADESRSSRERWSSFGLP
PLVPLDHPVEPLFQALSSDNVLLTLSALVCERPVVVTCSVRSLLSVAVSS
LKTLLHPLGWHHAYAPLLPATEIIGFWRSKLLLDKRAAMSQGRSGSPPRI
TPHQWGSSPGGGGGGGGGGGGGGLLIRPTPNRAVPQPRFRPQTAFLVGLE
GEVVRMACGKPRGVFANGAEGSKESGGGGDSGAEVWGVVSSESCMVPPNA
EVYAMGVAATQPSPALLETVRAMLKQSVHVDLDYDEVTWPPPVPPAVSPE
DADVASRPNHGGKGGVGGGSFGGFGGEFRGGYSGEGDGSSTGGGLENDGA
PPVWPEEAARRAKRVIQSTLFPEFEDFDLVSPTPPETSELGAEDDSALFK
CSRSAGGGAEVSLRDKIQACRNSSTPVRDRFRAGVRGVVSRMTESVVGMY
APTPADLALRAAAAGLVASVLGRVKEFTTLFAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001194cDENN_dom