prot_H-elongata_contig47625.11900.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47625.11900.1
Unique Nameprot_H-elongata_contig47625.11900.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
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BLAST of mRNA_H-elongata_contig47625.11900.1 vs. uniprot
Match: D7G1N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N2_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 4.260e-47
Identity = 101/183 (55.19%), Postives = 126/183 (68.85%), Query Frame = 0 
Query:    1 KEG-LGCVARVLALSVASKKRELLCDRKDPFVHLTPRRLALTVIKASLVVGGPMLNEVILESLEEEDERRDPSWSSNEGGVGQGNHGFSGFLLGEGRSNVSGRVFVDAQGNVA--RTGERDEEEQPD-----VMKSLARSFEHFPALAFRRILHNVMAVSTQRILEWQAVMHLSKRTADRLTK 175
            KEG LG  ARVLALSV+S KRELLCDRKDP+ HL+PRRLA TV+K+  VV  PMLNEVILE+L+E+D         N+ G G+G+ G  G + G+       RV+V   G +   R G+ ++ E+ D     V  SL++SFE FPAL FRR+LH+VM VSTQR+LEWQAV+ L  RTADRLTK
Sbjct:  128 KEGILGYGARVLALSVSSPKRELLCDRKDPYAHLSPRRLAFTVVKSGFVVAAPMLNEVILENLDEDD---------NQSGGGRGSFG-GGRVGGDPFGTNIRRVYVGQDGELVFERAGDEEKREEGDRADGDVAASLSKSFELFPALTFRRVLHSVMTVSTQRLLEWQAVLRLPARTADRLTK 300
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BLAST of mRNA_H-elongata_contig47625.11900.1 vs. uniprot
Match: A0A6H5JFP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP6_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.980e-38
Identity = 94/197 (47.72%), Postives = 121/197 (61.42%), Query Frame = 0 
Query:    6 CVARVLALSVASK-KRELLCDRKDPFVHLTPRRLALTVIKASLVVGGPMLNEVILESLEEEDERRDPSWSSNEGGVGQGNHGFSGFLLGEGRSNVSGRVFVDAQGNVA--RTGE---RDEEEQPD--VMKSLARSFEHFPALA-------------------FRRILHNVMAVSTQRILEWQAVMHLSKRTADRLTK 175
            C + +L L V+ + +RELLCDRKDP+ HL+PRRLA TV+K+  VV  PMLNEVILE+L+E          +N+ G G+G+ G  G + G+       RV+V   G +   R GE   R+E +Q D  V KSL++SFE FPAL                    FRR+LH+VM VSTQR+LEWQAV+HL  RTADRLTK
Sbjct:   37 CPSCILPLFVSIRPRRELLCDRKDPYAHLSPRRLAFTVVKSGFVVAAPMLNEVILENLDE----------NNQSGGGRGSFG-GGRIGGDPFGTNIRRVYVGQDGELVFERAGEEKKREEGDQTDGDVAKSLSKSFELFPALVTTVPLSRTSKPYPFPVKQTFRRVLHSVMTVSTQRLLEWQAVLHLPARTADRLTK 222
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47625.11900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1N2_ECTSI4.260e-4755.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFP6_9PHAE1.980e-3847.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47625contigH-elongata_contig47625:44..3325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47625.11900.1mRNA_H-elongata_contig47625.11900.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47625 44..3325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47625.11900.1 ID=prot_H-elongata_contig47625.11900.1|Name=mRNA_H-elongata_contig47625.11900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
KEGLGCVARVLALSVASKKRELLCDRKDPFVHLTPRRLALTVIKASLVVG
GPMLNEVILESLEEEDERRDPSWSSNEGGVGQGNHGFSGFLLGEGRSNVS
GRVFVDAQGNVARTGERDEEEQPDVMKSLARSFEHFPALAFRRILHNVMA
VSTQRILEWQAVMHLSKRTADRLTK
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