prot_H-elongata_contig47587.11887.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig47587.11887.1
Unique Name	prot_H-elongata_contig47587.11887.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	133

Homology

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 8.060e-69
Identity = 99/133 (74.44%), Postives = 120/133 (90.23%), Query Frame = 0

Query:    1 MYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 133
            MY+AT +QFK EMAA I G RLLHLN+DLWVDKFSSLKYIG++LFY+DR W LRSRLIAVRQFNPT E+LE +RLSALL++Y+ ++ EE+ LD +++FSATSDAGSDV+RLCD+LLPGLWEWCVC+M+NCALV
Sbjct:   63 MYAATASQFKMEMAAQIGGMRLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALV 195

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 2.470e-64
Identity = 94/133 (70.68%), Postives = 119/133 (89.47%), Query Frame = 0

Query:    1 MYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 133
            MY+AT +QFK EMAA I G RLLHL++DLWVDKFSSLKY+G+ LFY+DR W LRSRLIAVRQFNPT E+LE +RLSAL+++++ ++ EE+ LD +++FSATSD+GSDV+RLCD+LLPGLWEWCVC+M+NCALV
Sbjct:  216 MYAATASQFKMEMAAQIGGMRLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALV 348

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 3.140e-55
Identity = 87/117 (74.36%), Postives = 105/117 (89.74%), Query Frame = 0

Query:   17 ITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 133
            I G RLLH N+DLWVDKFSSLKYIG++LFY DR W LRSRLIAVRQFNPT E+LE +RLSALL++Y+ ++ EE+ LD +++FSATSDAGSDV+RLCD+LLPGLWEWCVC+M+NCALV
Sbjct:  158 IGGMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALV 274

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 6.720e-52
Identity = 87/133 (65.41%), Postives = 112/133 (84.21%), Query Frame = 0

Query:    2 YSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVR-RLCDILLPGLWEWCVCYMLNCALV 133
            Y+ATTAQF+AE+ A++ G   LHL++DLWVDK S+L ++GV+LFYIDR W L+SRL+AVRQFNPT EM E+ RLSA+LE+Y+T + EEF LD +M+FSATSDAGSDV+ RLC  L+P LW+ CVC+MLNC+LV
Sbjct:   53 YAATTAQFQAEITAEVGGVPRLHLDLDLWVDKSSTLMFMGVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLV 185

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 8.200e-49
Identity = 80/128 (62.50%), Postives = 105/128 (82.03%), Query Frame = 0

Query:    2 YSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLN 129
            Y+AT AQFK EMA ++ G   LHL+++LWVDK SSLKY+GV+ FY++  W+L+S L+AVRQFNPT E L++ RLS LLE+YV  + EEF +DA+++FSATSDAG DV+RLC +LLPGL EWCVC+ML+
Sbjct:  164 YAATAAQFKEEMATEVAGVPCLHLSLELWVDKSSSLKYMGVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLS 291

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.300e-44
Identity = 78/119 (65.55%), Postives = 98/119 (82.35%), Query Frame = 0

Query:    2 YSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVR-RLCDILLPGL 119
            Y+ATTAQFKAE+AA++ G   LHL+++LWVDK S+L ++GV+LFYIDR W LRSRL+AVRQFNPT EM E+ RLS LLE+++T + E F LD  M+FSATSDAGSDV+ RLC IL+P L
Sbjct:   66 YAATTAQFKAEIAAEVGGVPRLHLDLELWVDKSSTLMFMGVRLFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVLE-FGLDVYMLFSATSDAGSDVKHRLCYILIPRL 183

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 4.070e-44
Identity = 75/107 (70.09%), Postives = 91/107 (85.05%), Query Frame = 0

Query:    1 MYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSD 107
            MY+AT +Q+K EMAA I G RLLHLN DLWVDKFSSLK IG++LFYIDR W LRSRLIAVRQFNPT E+LE +RL ALL++Y+ ++ EE+ LD +++FSATSDAGSD
Sbjct:   44 MYAATASQYKMEMAAQIGGMRLLHLNRDLWVDKFSSLKCIGIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSD 150

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 6.360e-40
Identity = 63/93 (67.74%), Postives = 82/93 (88.17%), Query Frame = 0

Query:   41 GVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 133
            G++L+Y+DR W LRSRLIAVRQFNPT E+LE +RLS LL++Y+  +  E+ LD +++FSATSDAGSDV+RLCD+LLPGLWEWCVC+M+NCA+V
Sbjct:    3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVV 95

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR)

HSP 1 Score: 124 bits (312), Expect = 1.050e-32
Identity = 56/135 (41.48%), Postives = 88/135 (65.19%), Query Frame = 0

Query:    1 MYSATTAQFKAEMAADITGGRL--LHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 133
            +Y  TT+    ++  +I+   L  LH+N++LW  + S  ++ G+QLFY+ R WE+++ L+AVR F P+  +L    LS +L+ +   +  EFN+  + I S+TSD GSDV+RLC +L+P  WEWC+ +MLNC LV
Sbjct:   63 IYIGTTSSLMKKLRKEISVTPLAFLHINVNLWTSRLSKDRFFGIQLFYVSREWEVKAVLLAVRHFCPSGNLLPGRSLSDILQLWTNKIILEFNVSYDKILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLV 197

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BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 7.520e-18
Identity = 46/134 (34.33%), Postives = 78/134 (58.21%), Query Frame = 0

Query:    1 MYSATTAQFKAEMAADITGGRL--LHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLC-DILLPG---LWEWCVCYML 128
            +Y AT       M  ++    L  LH NID+W DK S  K++G+ +FY+D N+EL+  L++++++ P    L   R S +L + + ++ EEF L  + + S T+D+GSDV+ +  + L P    LW WC C+++
Sbjct:  233 LYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLM 366

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot

BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
A0A6H5KEC8_9PHAE	8.060e-69	74.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KWS6_9PHAE	2.470e-64	70.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZ82_9PHAE	3.140e-55	74.36	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LBK4_ECTSI	6.720e-52	65.41	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LFP4_ECTSI	8.200e-49	62.50	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KHW5_9PHAE	1.300e-44	65.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JM59_9PHAE	4.070e-44	70.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JNY1_9PHAE	6.360e-40	67.74	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A2V3ILY8_9FLOR	1.050e-32	41.48	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A6H5JJJ9_9PHAE	7.520e-18	34.33	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig47587	contig	H-elongata_contig47587:3010..3661 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig47587.11887.1	mRNA_H-elongata_contig47587.11887.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig47587 2989..3661 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig47587.11887.1 ID=prot_H-elongata_contig47587.11887.1|Name=mRNA_H-elongata_contig47587.11887.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRN
WELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSA
TSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf