prot_H-elongata_contig47540.11884.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47540.11884.1
Unique Nameprot_H-elongata_contig47540.11884.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length216
Homology
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BLAST of mRNA_H-elongata_contig47540.11884.1 vs. uniprot
Match: D7FPQ8_ECTSI (Kinesin K39 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ8_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 9.990e-39
Identity = 94/133 (70.68%), Postives = 110/133 (82.71%), Query Frame = 0 
Query:   23 SPSVETEELQAHAEAMELELRYTLESFEGQLSAMAREKVAIQKQVKELTGQNTTLRKQVSHYKKLAKESEGHMEQNEVSKLRARLAEAENVHTEKDRQLAAKDKEAESAIARARELEWRVQAAESELSSVKET 155
            S S E E+LQAHA+AMELELRYTLESFEGQLSAMAREKVAIQKQVKELTGQ TTLRKQVSHYKK+AKESE   EQ+EV +LRARL EAE++   K ++LAAK +EA SA A A  LE R+Q A+SE+  ++E+
Sbjct:  801 SRSAEAEQLQAHADAMELELRYTLESFEGQLSAMAREKVAIQKQVKELTGQCTTLRKQVSHYKKVAKESEAQGEQDEVIELRARLVEAEDILVVKSQELAAKAQEAVSATALANALEHRIQEADSEVLGLRES 933
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BLAST of mRNA_H-elongata_contig47540.11884.1 vs. uniprot
Match: D7FYN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYN2_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 4.930e-32
Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 0 
Query:    5 GGHPSGAINTNNIAPCPPSPSVETEELQAHAEAMELELRYTLESFEGQLSAMAREKVAIQKQVKELTGQNTTLRKQVSHYKKLAKESEGHMEQNEVSKLRARLAEAENVHTEKDRQLAAKDKEAESAIARARELEWR 141
            GG    +   N +APC  S   E E+LQAHAEAMELELR+T ESF+ QLSAMAREKVAIQKQVKE+TGQ TTLRKQVSHYKK+AKE E   EQ+EV +LRARL EA+    E  ++LAAK +E +S+ A A  LE R
Sbjct:  732 GGKEQASAIANGVAPC--STGAEAEQLQAHAEAMELELRFTWESFQRQLSAMAREKVAIQKQVKEVTGQCTTLRKQVSHYKKVAKEREA-TEQHEVIELRARLEEAQRTLVEMSQELAAKTQETDSSRALANTLEHR 865
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47540.11884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPQ8_ECTSI9.990e-3970.68Kinesin K39 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7FYN2_ECTSI4.930e-3262.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..162
NoneNo IPR availableCOILSCoilCoilcoord: 53..73
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availableCOILSCoilCoilcoord: 181..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47540contigH-elongata_contig47540:91..1811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47540.11884.1mRNA_H-elongata_contig47540.11884.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47540 91..1811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47540.11884.1 ID=prot_H-elongata_contig47540.11884.1|Name=mRNA_H-elongata_contig47540.11884.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
MVANGGHPSGAINTNNIAPCPPSPSVETEELQAHAEAMELELRYTLESFE
GQLSAMAREKVAIQKQVKELTGQNTTLRKQVSHYKKLAKESEGHMEQNEV
SKLRARLAEAENVHTEKDRQLAAKDKEAESAIARARELEWRVQAAESELS
SVKETYASTAAEAENVHTEKDRQMAAKDKEAESAIARARELEWRVQAAES
ELSSVKETCASTAAEL
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