prot_H-elongata_contig4745.11867.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4745.11867.1
Unique Nameprot_H-elongata_contig4745.11867.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig4745.11867.1 vs. uniprot
Match: D7G572_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G572_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 2.990e-40
Identity = 68/100 (68.00%), Postives = 85/100 (85.00%), Query Frame = 0
Query:    1 MQSVVSATSEINTQLEKRAQTLRSLFTTKEVLPENYEGWSRMHRDMLVHTETSAYLYVAKTWEKVLEDYLLFYNYWKTNLKNNPIVFDNDGKGGSGHYFG 100
            + SVVS T++INTQL+KRAQTLRSLF+TK+VLPEN EGW R+HR+MLVH E +AYL  A +WEK+LEDYLL+YNY+K NLK++ IVF ++GKGG   YFG
Sbjct:  221 LSSVVSETADINTQLDKRAQTLRSLFSTKDVLPENQEGWYRLHREMLVHHEVNAYLSAATSWEKLLEDYLLYYNYYKMNLKDSTIVFQSEGKGGGNDYFG 320          
BLAST of mRNA_H-elongata_contig4745.11867.1 vs. uniprot
Match: A0A835YMR0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.650e-37
Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    4 VVSATSEINTQLEKRAQTLRSLFTTKEVLPENYEGWSRMHRDMLVHTETSAYLYVAKTWEKVLEDYLLFYNYWKTNLKNNPIVFDNDGKGGSGH-YFG 100
            +V++ +E+N+QLEKRAQTL+ LFTTK+VLPEN  GW R HRD+LVH+ET+AYL VAK WEKVLEDY+L+YNYWKTN+K+  + F N GK   G  YFG
Sbjct:  156 IVNSINEVNSQLEKRAQTLQLLFTTKDVLPENRTGWIRAHRDLLVHSETNAYLQVAKIWEKVLEDYVLYYNYWKTNIKDGDLAFGNQGKSERGSDYFG 253          
BLAST of mRNA_H-elongata_contig4745.11867.1 vs. uniprot
Match: A0A836C7X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X8_9STRA)

HSP 1 Score: 128 bits (321), Expect = 9.480e-35
Identity = 61/98 (62.24%), Postives = 79/98 (80.61%), Query Frame = 0
Query:    4 VVSATSEINTQLEKRAQTLRSLFTTKEVLPENYEGWSRMHRDMLVHTETSAYLYVAKTWEKVLEDYLLFYNYWKTNLKNNPIVFDNDGKGG-SGHYFG 100
            + ++T+E+N QLEKRA+TL+ LFTTK+VLPEN  GW + HRD+LVH ET+AYL +AK WEKVLEDY+L++NYWKTNLK+  + F + GKG   G YFG
Sbjct:  147 LANSTNEVNLQLEKRARTLQLLFTTKDVLPENRAGWIKAHRDLLVHCETNAYLRMAKIWEKVLEDYVLYFNYWKTNLKDGDLAFAHMGKGERGGDYFG 244          
BLAST of mRNA_H-elongata_contig4745.11867.1 vs. uniprot
Match: A0A836CFQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.170e-23
Identity = 46/99 (46.46%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    1 MQSVVSATSEINTQLEKRAQTLRSLFTTKEVLPENYEGWSRMHRDMLVHTETSAYLYVAKTWEKVLEDYLLFYNYWKTNLKNNPIVFDNDGKGGSGHYF 99
            M+   SA +++N  L +R +TLR LFTTKEV   N EGW + H ++L   E++AYL + ++WE++LE YLL YNYW  NLK++ IVF + G+     YF
Sbjct:  161 MKRTNSARTQVNLHLTQRVETLRQLFTTKEVAAVNLEGWEKAHSELLTLQESNAYLVMGRSWEQLLESYLLLYNYWVLNLKHDSIVFGDAGRSSGNDYF 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4745.11867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G572_ECTSI2.990e-4068.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMR0_9STRA1.650e-3765.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7X8_9STRA9.480e-3562.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFQ5_9STRA2.170e-2346.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4745contigH-elongata_contig4745:9814..10763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4745.11867.1mRNA_H-elongata_contig4745.11867.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4745 8774..11569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4745.11867.1 ID=prot_H-elongata_contig4745.11867.1|Name=mRNA_H-elongata_contig4745.11867.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MQSVVSATSEINTQLEKRAQTLRSLFTTKEVLPENYEGWSRMHRDMLVHT
ETSAYLYVAKTWEKVLEDYLLFYNYWKTNLKNNPIVFDNDGKGGSGHYFG
*
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