prot_H-elongata_contig47435.11863.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47435.11863.1
Unique Nameprot_H-elongata_contig47435.11863.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length512
Homology
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BLAST of mRNA_H-elongata_contig47435.11863.1 vs. uniprot
Match: D7G483_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G483_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 7.660e-73
Identity = 170/384 (44.27%), Postives = 216/384 (56.25%), Query Frame = 0 
Query:   37 CSTTLLENQASPHVKNNKGQVPAVIAMIHGHASIARNLLRAFSMVKPALRRFQVT---ANVAIATLPSYK-KPSAKSDAASDRAAVTAPGNKPKLS-----AGGVIDLEG--------GDDA--SIIPMRGNDQQLPDAVNIRERGGKGYSSKNTNESLRVMSAERKVITPDAGRKDTREGPEAGVDAS----DGAQASSMVSLRRAP---ILSHRASELGFAAEIGSEVLDALVPDYWDDNDIRCAISLAEKGSVWCLASLFALGLDPLCEHPDSGDTLGIAAVRGGHRNTLEVCLETGVCFAAKNKQGRTALHEAVSREDSEVAALLLANPYLSGLEAKDLCDPDXXXXXXXXXXXXXXXXXXXXXLAVQPDSEEEGACDGG 394
            C+T LLEN ASP VKNNKGQVPAV+AM+HGHAS  + LL+AFS  + A +R +     A VA+A+  ++  +P   +D   +R+       KP          G++ LEG         D A  +++   G+D   PD      RG +G  + +   S   +   R       G K    G +A VD      D     S  S R +     LS RAS+ G A ++   +L+ LVP +WDD+DIRCA++LAE+G  WCLASLFALGLDP C+HPDSGDT+GIAA RGG R TLEVCLETGV FA KN++GR+ALH AV R+D EVAALLLANP LSG+E  DLCDPD                     LA + DSE      GG
Sbjct:  667 CATNLLENNASPVVKNNKGQVPAVVAMLHGHASTGKKLLQAFSAAETASKRSRTIDAFAAVAMASGVTHAVEPVVDADKDENRSGGRQGSEKPGAGXXXXXGDGLVGLEGITTPEVASADVAEPAVVGEGGSDHNTPDDAGSA-RGDRGLGAADGGAS--ELQGGRPHSATTVGEKAGSTGSDASVDGGGRGGDAVSVQSNASSRASASLEALSRRASKAGVAMDLNVIMLEDLVPRHWDDDDIRCAVALAERGEAWCLASLFALGLDPDCQHPDSGDTIGIAAARGGDRETLEVCLETGVSFATKNRRGRSALHAAVVRDDLEVAALLLANPGLSGIEVDDLCDPDEDGRTPLHEMAARGEAPTVLLLATEADSEWTTGGSGG 1047
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BLAST of mRNA_H-elongata_contig47435.11863.1 vs. uniprot
Match: A0A6H5KKE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.590e-22
Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 0 
Query:    1 DELARLLTSQPNSALDHAGVLGITPLHLTAERGYEKCSTTLLENQASPHVKNNKGQVPAVIAMIHGHASIARNLLRAFSMVKPALRR 87
            DELARLLTS+  + ++     G+TP+HL A  G+EKC+T LLEN ASP VKNNKGQVPAV+AM+HGHAS  + LL+AFS  K A +R
Sbjct:  221 DELARLLTSRSGTMVNVGDAGGVTPIHLAAAGGWEKCATNLLENNASPAVKNNKGQVPAVVAMLHGHASTGKKLLQAFSAAKTASKR 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47435.11863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G483_ECTSI7.660e-7344.27Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KKE4_9PHAE1.590e-2260.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 54..85
e-value: 1100.0
score: 4.8
coord: 319..350
e-value: 43.0
score: 13.0
coord: 359..388
e-value: 650.0
score: 6.4
coord: 286..315
e-value: 1200.0
score: 4.5
coord: 21..50
e-value: 0.81
score: 18.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 21..53
score: 9.778
NoneNo IPR availablePFAMPF13637Ank_4coord: 302..340
e-value: 6.9E-5
score: 23.3
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 22..76
coord: 293..404
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..97
e-value: 1.1E-10
score: 43.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 225..391
e-value: 3.2E-18
score: 67.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 15..378
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 21..76
score: 13.894
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 286..379
score: 15.088

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47435contigH-elongata_contig47435:276..3713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47435.11863.1mRNA_H-elongata_contig47435.11863.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47435 276..3713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47435.11863.1 ID=prot_H-elongata_contig47435.11863.1|Name=mRNA_H-elongata_contig47435.11863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=512bp
DELARLLTSQPNSALDHAGVLGITPLHLTAERGYEKCSTTLLENQASPHV
KNNKGQVPAVIAMIHGHASIARNLLRAFSMVKPALRRFQVTANVAIATLP
SYKKPSAKSDAASDRAAVTAPGNKPKLSAGGVIDLEGGDDASIIPMRGND
QQLPDAVNIRERGGKGYSSKNTNESLRVMSAERKVITPDAGRKDTREGPE
AGVDASDGAQASSMVSLRRAPILSHRASELGFAAEIGSEVLDALVPDYWD
DNDIRCAISLAEKGSVWCLASLFALGLDPLCEHPDSGDTLGIAAVRGGHR
NTLEVCLETGVCFAAKNKQGRTALHEAVSREDSEVAALLLANPYLSGLEA
KDLCDPDKDGRTPLHEMASRGQAPTVLLLAVQPDSEEEGACDGGRIEVAL
VTESTTGVIRTSGDEDEGDSSRDSEAHNQLTESSVTPSSASVLPGATSRS
SDGTNRPISSAAGPKTAADTGSPVFDVNEAAATEKRCPSSRVRFPRRLSA
FVVPSLPNNGQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom