prot_H-elongata_contig47376.11854.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47376.11854.1
Unique Nameprot_H-elongata_contig47376.11854.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 6.470e-19
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    5 FSSSACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            F  S CGE G++TCCD C RVFHEECL +G+DS LAA HQTE+D WYCP+C
Sbjct:  312 FFCSVCGESGDITCCDQCPRVFHEECLPIGTDSHLAAHHQTEKDPWYCPSC 362          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.210e-18
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    5 FSSSACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            F  SACGE G++TCCD C RVFHEECL +G+DS LAA  QTEED WYCP+C
Sbjct:  785 FFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSC 835          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 1.210e-18
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    5 FSSSACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            F  SACGE G++TCCD C RVFHEECL +G+DS LAA  QTEED WYCP+C
Sbjct:  885 FFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSC 935          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.070e-17
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    8 SACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            S CGE G++TCCD C RVFHEECL +G++S LAA HQTE+D WYCP+C
Sbjct:  307 SVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWYCPSC 354          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A7S2YKC8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKC8_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.330e-8
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    5 FSSSACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            +  + CGE G+V CCDGC +V+H++C+ L  +   A +   +E+ WYCP C
Sbjct:   78 YYCAVCGEFGDVICCDGCPKVYHQDCIPLSHEPPNALD---DEEPWYCPVC 125          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A0B7JPG6_BIOOC (PHD-type domain-containing protein n=2 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A0B7JPG6_BIOOC)

HSP 1 Score: 54.7 bits (130), Expect = 2.980e-7
Identity = 24/48 (50.00%), Postives = 28/48 (58.33%), Query Frame = 0
Query:    8 SACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            SACG  G+V CCDGC R FH EC+++  D  L AE       WYC  C
Sbjct:  688 SACGNVGDVVCCDGCPRSFHFECVDMDRDEDLPAE-------WYCNEC 728          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A168ERL1_CORFA (Zinc finger domain-containing protein, PHD-finger n=1 Tax=Cordyceps fumosorosea (strain ARSEF 2679) TaxID=1081104 RepID=A0A168ERL1_CORFA)

HSP 1 Score: 53.9 bits (128), Expect = 5.580e-7
Identity = 24/48 (50.00%), Postives = 26/48 (54.17%), Query Frame = 0
Query:    8 SACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            SACG  G+V CCDGC R FH EC+ L  D  L        D WYC  C
Sbjct:  809 SACGNAGDVLCCDGCPRSFHFECVNLAQDEDLP-------DDWYCNEC 849          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A367LRP6_9HYPO (PHD-type domain-containing protein n=1 Tax=Ophiocordyceps polyrhachis-furcata BCC 54312 TaxID=1330021 RepID=A0A367LRP6_9HYPO)

HSP 1 Score: 52.8 bits (125), Expect = 1.430e-6
Identity = 22/48 (45.83%), Postives = 27/48 (56.25%), Query Frame = 0
Query:    8 SACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            SACG  G+V CCDGC R FH EC+++    +L        D WYC  C
Sbjct:  618 SACGNAGDVVCCDGCPRSFHFECVDMAQSDRLP-------DEWYCNEC 658          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: A0A8K0NE88_9HYPO (Uncharacterized protein n=1 Tax=Claviceps africana TaxID=83212 RepID=A0A8K0NE88_9HYPO)

HSP 1 Score: 52.8 bits (125), Expect = 1.430e-6
Identity = 23/48 (47.92%), Postives = 27/48 (56.25%), Query Frame = 0
Query:    8 SACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            SACG  G+V CCDGC R FH EC+++    QL        D WYC  C
Sbjct:  787 SACGNTGDVVCCDGCPRSFHFECVDMVRSDQLP-------DEWYCNEC 827          
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Match: UPI001E8E82BD (uncharacterized protein n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8E82BD)

HSP 1 Score: 52.4 bits (124), Expect = 1.950e-6
Identity = 22/48 (45.83%), Postives = 26/48 (54.17%), Query Frame = 0
Query:    8 SACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAWYCPAC 55
            SACG  GE+ CCDGC R FH EC+ +  +  L        D WYC  C
Sbjct:  722 SACGNAGEMVCCDGCPRAFHFECVGINPEESLP-------DEWYCSEC 762          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47376.11854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI07_ECTSI6.470e-1968.63GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JJY6_9PHAE1.210e-1870.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY8_ECTSI1.210e-1870.59Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5L4S9_9PHAE1.070e-1768.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2YKC8_9STRA3.330e-841.18Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A0B7JPG6_BIOOC2.980e-750.00PHD-type domain-containing protein n=2 Tax=Bionect... [more]
A0A168ERL1_CORFA5.580e-750.00Zinc finger domain-containing protein, PHD-finger ... [more]
A0A367LRP6_9HYPO1.430e-645.83PHD-type domain-containing protein n=1 Tax=Ophioco... [more]
A0A8K0NE88_9HYPO1.430e-647.92Uncharacterized protein n=1 Tax=Claviceps africana... [more]
UPI001E8E82BD1.950e-645.83uncharacterized protein n=1 Tax=Emericellopsis atl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 9..55
e-value: 2.0E-7
score: 30.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 4..55
score: 8.858
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..55
e-value: 7.4E-11
score: 43.6
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 9..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47376contigH-elongata_contig47376:3902..4066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47376.11854.1mRNA_H-elongata_contig47376.11854.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47376 3902..4066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47376.11854.1 ID=prot_H-elongata_contig47376.11854.1|Name=mRNA_H-elongata_contig47376.11854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MVAAFSSSACGEHGEVTCCDGCARVFHEECLELGSDSQLAAEHQTEEDAW
YCPAC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD