prot_H-elongata_contig47273.11837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47273.11837.1
Unique Nameprot_H-elongata_contig47273.11837.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig47273.11837.1 vs. uniprot
Match: D8LDC1_ECTSI (DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC1_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 9.700e-33
Identity = 56/72 (77.78%), Postives = 68/72 (94.44%), Query Frame = 0 
Query:    1 MEVFRTFLGGGVFEHLIGPLSPRMVPVQDPDYHHQTSRALAEDLERRLEVNVRGDFSWFDQIAWAEALQLRE 72
            ++VFRTFLGGG+FEHLIGPLSPRMVPV+DPDYHH+ S++LAE+LERRLEV+VRG+  +F+Q AWAEALQLRE
Sbjct:  247 LKVFRTFLGGGMFEHLIGPLSPRMVPVRDPDYHHRKSKSLAEELERRLEVDVRGNSFYFNQAAWAEALQLRE 318
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BLAST of mRNA_H-elongata_contig47273.11837.1 vs. uniprot
Match: A0A6H5JFE7_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.280e-32
Identity = 57/72 (79.17%), Postives = 68/72 (94.44%), Query Frame = 0 
Query:    1 MEVFRTFLGGGVFEHLIGPLSPRMVPVQDPDYHHQTSRALAEDLERRLEVNVRGDFSWFDQIAWAEALQLRE 72
            MEVFRTFLGGG+FEHLIGPLSPRMVPV+DPDYHH+ S++LAE+LERRLEV+V+G+  +F+Q AWAEALQLRE
Sbjct:  330 MEVFRTFLGGGMFEHLIGPLSPRMVPVRDPDYHHRKSKSLAEELERRLEVDVQGNSFYFNQAAWAEALQLRE 401
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47273.11837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDC1_ECTSI9.700e-3377.78DnaJ domain containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JFE7_9PHAE2.280e-3279.17J domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47273contigH-elongata_contig47273:298..1553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47273.11837.1mRNA_H-elongata_contig47273.11837.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47273 169..2215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47273.11837.1 ID=prot_H-elongata_contig47273.11837.1|Name=mRNA_H-elongata_contig47273.11837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MEVFRTFLGGGVFEHLIGPLSPRMVPVQDPDYHHQTSRALAEDLERRLEV
NVRGDFSWFDQIAWAEALQLRE*
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