prot_H-elongata_contig114840.1183.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114840.1183.1
Unique Nameprot_H-elongata_contig114840.1183.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Match: A0A6L2JDW5_TANCI (Uncharacterized protein ycf68 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JDW5_TANCI)

HSP 1 Score: 66.2 bits (160), Expect = 5.220e-12
Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 FGLRAATRSHEVGSTSNRGSGCRGEYVTRPCTHHPSRPGS 40
            FGL +ATR HEVG  SNRGS CRGEYV  PCTH PS PG+
Sbjct:  177 FGLFSATREHEVGIASNRGSACRGEYVPEPCTHRPSHPGN 216          
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Match: A0A175AB67_9FIRM (Uncharacterized protein n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A175AB67_9FIRM)

HSP 1 Score: 62.0 bits (149), Expect = 1.500e-11
Identity = 29/42 (69.05%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 FGLRAATRSHEVGSTSNRGSGCRGEYVTRPCTHHPSRPGSLG 42
            FGL+AATR HEVG  SNRGS C GEYV  PCTH PS   S G
Sbjct:   39 FGLQAATRLHEVGIASNRGSACHGEYVPGPCTHRPSHHESRG 80          
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Match: UPI001900472D (hypothetical protein n=2 Tax=Paenibacillus TaxID=44249 RepID=UPI001900472D)

HSP 1 Score: 60.8 bits (146), Expect = 4.290e-11
Identity = 29/41 (70.73%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 FGLRAATRSHEVGSTSNRGSGCRGEYVTRPCTHHPSRPGSL 41
            FGL+AATR HEVG  SNRGS CRGEYV   CTH PS   SL
Sbjct:   39 FGLQAATRLHEVGIASNRGSACRGEYVPGSCTHRPSHHESL 79          
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Match: A0A7Z1LHQ8_9HYPH (50S ribosomal protein L32 n=1 Tax=Candidatus Hodgkinia cicadicola TaxID=573658 RepID=A0A7Z1LHQ8_9HYPH)

HSP 1 Score: 56.6 bits (135), Expect = 2.550e-9
Identity = 26/40 (65.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 FGLRAATRSHEVGSTSNRGSGCRGEYVTRPCTHHPSRPGS 40
            FGL +ATR HEVG  SNRGS C GEYV   CTH PS  G+
Sbjct:   33 FGLYSATRVHEVGIASNRGSACHGEYVLGSCTHRPSHHGN 72          
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Match: A0A3G2C8D7_9FIRM (Uncharacterized protein n=1 Tax=uncultured Dialister sp. TaxID=278064 RepID=A0A3G2C8D7_9FIRM)

HSP 1 Score: 53.5 bits (127), Expect = 3.310e-8
Identity = 25/36 (69.44%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    1 FGLRAATRSHEVGSTSNRGSGCRGEYVTRPCTHHPS 36
            F L+AATR HE G  SNRGS  RGEYV  PCTH PS
Sbjct:   39 FRLQAATRLHEAGIASNRGSAYRGEYVPGPCTHRPS 74          
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Match: UPI001CC43414 (autotransporter adhesin family protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CC43414)

HSP 1 Score: 46.6 bits (109), Expect = 6.830e-5
Identity = 20/27 (74.07%), Postives = 20/27 (74.07%), Query Frame = 0
Query:   10 HEVGSTSNRGSGCRGEYVTRPCTHHPS 36
            HEVG  SNRGS C GEYV  PCTH PS
Sbjct:  143 HEVGIASNRGSECHGEYVPGPCTHRPS 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114840.1183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6L2JDW5_TANCI5.220e-1272.50Uncharacterized protein ycf68 (Fragment) n=1 Tax=T... [more]
A0A175AB67_9FIRM1.500e-1169.05Uncharacterized protein n=2 Tax=Eubacteriales TaxI... [more]
UPI001900472D4.290e-1170.73hypothetical protein n=2 Tax=Paenibacillus TaxID=4... [more]
A0A7Z1LHQ8_9HYPH2.550e-965.0050S ribosomal protein L32 n=1 Tax=Candidatus Hodgk... [more]
A0A3G2C8D7_9FIRM3.310e-869.44Uncharacterized protein n=1 Tax=uncultured Dialist... [more]
UPI001CC434146.830e-574.07autotransporter adhesin family protein n=1 Tax=Esc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114840contigH-elongata_contig114840:153..278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114840.1183.1mRNA_H-elongata_contig114840.1183.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114840 153..278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114840.1183.1 ID=prot_H-elongata_contig114840.1183.1|Name=mRNA_H-elongata_contig114840.1183.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
FGLRAATRSHEVGSTSNRGSGCRGEYVTRPCTHHPSRPGSLG
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