prot_H-elongata_contig47242.11834.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: A0A6H5KW60_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW60_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 3.010e-12 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0
Query: 4 GNPLVGFGPTGGEA---LIGTLCWQVEYYFSEENLVTDSYLRGLMDVDGYVAVSKV 56
G +VG G GGEA L+ L WQVEYYFS +NLVTD+YLRGLMD +G+VAVSK+
Sbjct: 1587 GANVVGGGSDGGEAFEALMAALRWQVEYYFSADNLVTDTYLRGLMDPEGFVAVSKI 1642
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: D7FJX9_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX9_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 6.870e-12 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query: 4 GNPLVGFGPTGGEA---LIGTLCWQVEYYFSEENLVTDSYLRGLMDVDGYVAVSKV 56
G + G G GGEA L+ L WQVEYYFS +NLVTD+YLRGLMD +G+VAVSK+
Sbjct: 43 GANVGGGGSDGGEAFEALMAALRWQVEYYFSADNLVTDAYLRGLMDPEGFVAVSKI 98
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: A0A7S2G044_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G044_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 3.570e-6 Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 0
Query: 16 EALIGTLCWQVEYYFSEENLVTDSYLRGLMDVDGYVAVSKVRK 58
+ L+ +LC Q+EYYFS ENL+ D YLR MD++GYV ++++ K
Sbjct: 211 DILLLSLCHQIEYYFSAENLIRDVYLRSKMDMNGYVLLTEIAK 253
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: UPI001C4EFCC7 (la-related protein 1C-like isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4EFCC7) HSP 1 Score: 50.1 bits (118), Expect = 2.450e-5 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query: 5 NPLVGFGPTGGEALIGTLCWQVEYYFSEENLVTDSYLRGLMDVDGYVAV 53
NP VG L T+ +Q+EYYFS+ENLV D+YL+ LMD +G+V++
Sbjct: 355 NPEVG--------LCNTILYQIEYYFSKENLVKDAYLKSLMDNEGWVSI 395
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: UPI00053A0E1E (la-related protein 1C n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A0E1E) HSP 1 Score: 49.3 bits (116), Expect = 4.600e-5 Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
Query: 25 QVEYYFSEENLVTDSYLRGLMDVDGYVAV------SKVRKLWNALQ 64
Q++YYFSEENL+TD YLRG MD +G+V + KV +L +++Q
Sbjct: 386 QIQYYFSEENLITDLYLRGFMDEEGFVPLRVIAGFKKVAELTDSIQ 431
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: A0A6J1BZT7_MOMCH (la-related protein 1C-like n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1BZT7_MOMCH) HSP 1 Score: 48.5 bits (114), Expect = 8.620e-5 Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 0
Query: 17 ALIGTLCWQVEYYFSEENLVTDSYLRGLMDVDGYVAVS------KVRKLWNALQ 64
+L ++ Q+EYYFS++NL+TD++LR MD G+V +S +V+KL N +Q
Sbjct: 379 SLSASIVQQIEYYFSDDNLITDTFLRSWMDDQGWVPISLIAAFPRVKKLTNNIQ 432
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: A0A830CGF4_9LAMI (La-related protein 1a n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CGF4_9LAMI) HSP 1 Score: 48.5 bits (114), Expect = 8.690e-5 Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0
Query: 5 NPLVGFGPTGGEALIGTLCWQVEYYFSEENLVTDSYLRGLMDVDGYVAVSKVR--KLWNALQPPRPFVL 71
+P V P+ AL + Q+EYYFS++NL TD YLR LMD G++ +S + K + PF+L
Sbjct: 78 SPGVHMPPSPMLALRANIVKQIEYYFSDQNLETDPYLRSLMDSQGWIPISTIADFKRVKRMNADIPFIL 146
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Match: A0A4D9AIX5_SALSN (La-related protein 1 n=6 Tax=Salvia TaxID=21880 RepID=A0A4D9AIX5_SALSN) HSP 1 Score: 48.5 bits (114), Expect = 8.780e-5 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 5 NPLVGFGPTGGEALIGTLCWQVEYYFSEENLVTDS-YLRGLMDVDGYVAVSKVRK 58
+P V PT EAL ++ Q+EYYFS+ENLV+D YL LMD G+V VS + K
Sbjct: 294 SPGVPISPTPLEALRTSIVKQIEYYFSDENLVSDDVYLISLMDHHGWVPVSSIAK 348 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47242.11834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 8
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig47242.11834.1 ID=prot_H-elongata_contig47242.11834.1|Name=mRNA_H-elongata_contig47242.11834.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bpback to top |