prot_H-elongata_contig47188.11824.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47188.11824.1
Unique Nameprot_H-elongata_contig47188.11824.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length278
Homology
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: D7FVY5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY5_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 1.510e-114
Identity = 204/298 (68.46%), Postives = 238/298 (79.87%), Query Frame = 0
Query:    1 QSITVRDVDISTEDVSRLRRAWKASSF---------------SSPATVFGA--SPNDLEPVGGIIEGG---VEDNVRFVFAGRDLEEGQPLERYSLGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            Q ITVRDVD+ T+DVSRLR+AW A+ +               SS  T+     S  D +   G   GG   ++ ++R VFAG+DL+ G+PL  Y L   STV +LGRL+GGAQLGKVVKGRSQ KKKG ++PKEYAELQ+KYAKMQE+DMARQQ++ AKA+LRRR++QE KN+K+NRLKIQNQWRKIMRLAKVESLRK+IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQ ALR HLQ MD LIDLQDSRLLALEQEFE EL+TLQ EFA+ER+HV  QHAA++QELSDI+AAVE
Sbjct:   25 QCITVRDVDLCTDDVSRLRQAWGANIYPGADGGCVSSDPPWLSSQRTIANKRRSSTDFDKHVGEDGGGDTIIDADIRLVFAGKDLQRGRPLLGYGLQADSTVHVLGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAKYAKMQEMDMARQQAIAAKAELRRRIDQEEKNSKMNRLKIQNQWRKIMRLAKVESLRKDIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQTALRAHLQNMDQLIDLQDSRLLALEQEFEVELKTLQKEFAEERKHVVKQHAAEVQELSDIIAAVE 322          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A6H5L6H2_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H2_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 4.200e-108
Identity = 200/314 (63.69%), Postives = 234/314 (74.52%), Query Frame = 0
Query:    1 QSITVRDVDISTEDVSRLRRAWKASSF---------SSPATVFG--------ASPNDLEPVGGIIEGG---VEDNVRFVFAGRDLEEGQPLERYSLGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKV----------------ESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            Q ITVRDVD+ T+DVSRLR+A  AS +         S P  +           S  D +   G   GG   ++ ++R VFAG+DL++G+PL  Y L   STV +LGRL+GGAQLGKVVKGRSQ KKKG ++PKEYAELQ+KYAKMQE+DMAR  ++ AKA+LRRR+++E KN+K+NRLKIQNQWRKIMRLAKV                ESLRK+IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQ ALR HLQ MD LIDLQDSRLLALEQEFE EL+TLQ EFA+ER HV  QHAA++QELSDI+AAVE
Sbjct:   13 QCITVRDVDLCTDDVSRLRQACGASIYPGADGGCVSSDPPWLSSHRTRANRRRSSTDCDKNVGEDGGGDATIDADIRLVFAGKDLQKGRPLLGYGLQADSTVHVLGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAKYAKMQEMDMARSGAIAAKAELRRRIDKEEKNSKMNRLKIQNQWRKIMRLAKVTKKRPGGLVLTAQDRVESLRKDIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQTALRAHLQNMDQLIDLQDSRLLALEQEFEVELKTLQREFAEERNHVVKQHAAEVQELSDIIAAVE 326          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A835ZEY8_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY8_9STRA)

HSP 1 Score: 256 bits (655), Expect = 8.700e-78
Identity = 144/221 (65.16%), Postives = 178/221 (80.54%), Query Frame = 0
Query:   58 FVFAGRDLEEGQPLERYSLGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
             VFAG+ +     LE Y L  GST+ +LGRL+GGAQLGKVVKGRSQ KKK   + K++ +LQ+KY KMQE+D AR  +  A+ +L+RR+E E +N++ NRLKIQNQWRKIMRLAKVESLR++IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQ+Q ALR HL  MDGLIDLQD+RLL+LE+ FEAEL +++G F +ER  VA +HA++  EL D+VA V+
Sbjct:   31 LVFAGKCMVPDVSLEEYGLQEGSTIHVLGRLRGGAQLGKVVKGRSQVKKKD-GKSKDFGDLQAKYNKMQELDAARLAAQAARMELQRRMEAEERNSRTNRLKIQNQWRKIMRLAKVESLRRDIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQYQTALRAHLHGMDGLIDLQDARLLSLERHFEAELVSMEGGFREERARVAARHASETAELRDVVAVVD 250          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A7S4D6K3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6K3_HETAK)

HSP 1 Score: 226 bits (577), Expect = 2.550e-70
Identity = 130/228 (57.02%), Postives = 169/228 (74.12%), Query Frame = 0
Query:   51 GVEDNVRFVFAGRDLEEGQPLERYSLGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            G  D+      GR L   + +  Y L  G+T+ +  RL G A LGK +KG ++ +  G      +AEL+++YAKM+E D  RQ++++ + +L+ R+EQE KN+K N+LKIQNQWRKIMRLAKVESL+K+IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQ ALR HL+ +D LIDLQD+RLLALEQEFE EL  L+ +F  ER+ +  QHA ++QEL D++A V+
Sbjct:   37 GEPDSYYLTQGGRGLLLNRTVADYGLRQGTTLDIQFRLTGAANLGKKIKGSAEQRAAGAP----FAELEARYAKMREADTLRQRALLKQQELKSRMEQEQKNSKTNQLKIQNQWRKIMRLAKVESLKKDIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQTALRAHLRNLDRLIDLQDARLLALEQEFEGELRELEADFNAERDQIREQHAREVQELRDVMAEVD 260          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A7S2BVH9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVH9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 7.270e-63
Identity = 134/231 (58.01%), Postives = 168/231 (72.73%), Query Frame = 0
Query:   57 RFVFAGRDLEE---GQPLER------YSLGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            R  F GR+L+    G+   R      + +  GST+ LL RL G A LGK +KGR+   K+G +        Q KYA+MQE     Q+ + A+ +L+ R+EQE  N+++NRLKIQNQWRKIMRLAKVE+LRK IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQ +LR HL+ MD LIDLQD+RLLALEQEFE EL TL+ EF  E++ +  QHA ++QEL+DI++AV+
Sbjct:    4 RLCFGGRELQRYGNGKMAHRRMSLADHDVQEGSTLHLLFRLPGAALLGKQMKGRA---KQGDN--------QDKYARMQEQGALEQKYLAARNELKNRMEQERANSRVNRLKIQNQWRKIMRLAKVENLRKEIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQMSLRAHLENMDRLIDLQDTRLLALEQEFEKELYTLETEFGAEKDAIQKQHALEVQELNDIMSAVD 223          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: F0Y381_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y381_AURAN)

HSP 1 Score: 194 bits (493), Expect = 2.910e-55
Identity = 109/155 (70.32%), Postives = 128/155 (82.58%), Query Frame = 0
Query:  124 KMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            + +E D   Q+   A+ +L++R+EQE  N+++NRLKIQNQWRKIMRLAKVESLRK IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQ ALR+HLQ MD LIDLQDSRLL  EQEFE EL TL+ EF  E+E +  QHA + QEL+DI++AVE
Sbjct:    2 RQREYDAQNQKYQAARNELKQRMEQEKANSRMNRLKIQNQWRKIMRLAKVESLRKGIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQMALRSHLQNMDQLIDLQDSRLLTSEQEFEQELHTLEAEFQAEKEAIVKQHALETQELNDIMSAVE 156          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A7S2HDB4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDB4_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.280e-54
Identity = 123/229 (53.71%), Postives = 157/229 (68.56%), Query Frame = 0
Query:   57 RFVFAGRDLEEGQP--------LERYSLGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAV 277
            R  F GR+L             L  Y +   ST+ L+ R+KG A LGK +KGR++A+ K Q            YA+ +E +   Q+ + A+  L+ RL QE  N+++N+LKIQNQWRKIMR  K E+L+K IEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQ +LR+HLQ MD LIDLQD+RLLALEQEFE +L TL+ +F  ER+ +  QHAA+++EL  I+ AV
Sbjct:   45 RICFGGRELRRHSSGTTKTIFNLADYGVQDCSTLHLMLRVKGSALLGKPIKGRAKAQDKDQ------------YARNREQNEQEQKYLEARNALKLRLAQEQANSRINKLKIQNQWRKIMRPEKAETLKKEIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQMSLRSHLQNMDRLIDLQDTRLLALEQEFEKDLLTLEQDFGTERKAIIKQHAAEVEELEYIMDAV 261          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A8J2SCG7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCG7_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.520e-54
Identity = 117/203 (57.64%), Postives = 146/203 (71.92%), Query Frame = 0
Query:   76 LGGGSTVQLLGRLKGGAQLGKVVKGRSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            L  GS + LL R+ GGA LGK +KGR+              +L+ K+ + +E D   Q+  +A+ +L RR+EQE  N ++N+LKIQNQWRKIMRLAKVESLRK IEILSQNHERDVDRKDAIIQMLDRDLEEAE QF  +LR+HLQ +D LIDLQD+RLL  EQEFE EL TL+ EF  E+  +  QH A  +EL D++AA++
Sbjct:   59 LSDGSVLLLLPRMLGGALLGKSLKGRTPG-----------LDLEEKFMRQREYDAQNQKYQVARNELNRRMEQERANAQINQLKIQNQWRKIMRLAKVESLRKGIEILSQNHERDVDRKDAIIQMLDRDLEEAEGQFHMSLRSHLQNVDHLIDLQDTRLLKSEQEFEHELCTLEVEFQAEKGAIVKQHVANERELHDVIAAID 250          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A3L6VNT2_9STRA (NYD-SP28 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VNT2_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.210e-53
Identity = 112/207 (54.11%), Postives = 144/207 (69.57%), Query Frame = 0
Query:   75 SLGGGSTVQLLGRLKGGAQLGKVVKGRSQ---AKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            S GGG    +  +++GGAQLGK VKG S+    KK G+    E   L     +++  D  ++ ++  KA L+  +E+E K +K+N+LKIQN WRKIMRL KVE+LRK++EI SQNHERDVDRKDAIIQMLDRDLEEAE+QFQ ALR+HL  +D LIDLQD RLL LE EFE +L  L+ EF+ ER+ +  QH  +  EL  I+ AVE
Sbjct:    3 SSGGGKVYYVTRKVRGGAQLGKAVKGSSKDKKGKKDGKGMTDEERRLADSINRLEMSDYLKKLAVTKKAQLKEFMEKEQKISKMNKLKIQNHWRKIMRLVKVEALRKDVEIKSQNHERDVDRKDAIIQMLDRDLEEAEEQFQMALRSHLLNVDHLIDLQDGRLLGLEDEFEKDLHALEREFSVERDKIHKQHTVEKNELLSIMRAVE 209          
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Match: A0A024TIJ1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TIJ1_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.150e-51
Identity = 112/204 (54.90%), Postives = 144/204 (70.59%), Query Frame = 0
Query:   78 GGSTVQLLGRLKGGAQLGKVVKGRSQ---AKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQENKNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQMLDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQGEFADEREHVAIQHAAQIQELSDIVAAVE 278
            GG    +  +L+GGAQLGK VKG S+    KK G+    E   L    ++++  D  ++ ++  KA L+  +E+E+K +K+N+LKIQN WRKIMRL KVE LRK +EI SQNHERDVDRKDAIIQMLDRDLEEAE+QFQ ALR+HL  +D LIDLQD RLL LE EFE +L  L+ EF+ ER+ +  QHA +  EL +I+ AVE
Sbjct:    5 GGRVFHVARKLRGGAQLGKAVKGSSKDKKGKKDGKGMTDEERRLADSISRLEMNDYLKKLAVTKKAQLKEFMEKEHKISKMNKLKIQNHWRKIMRLVKVEGLRKEVEIKSQNHERDVDRKDAIIQMLDRDLEEAEEQFQMALRSHLLNVDQLIDLQDGRLLGLEDEFEKDLHALEREFSIERDKIHKQHAVEKNELLNIMRAVE 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47188.11824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVY5_ECTSI1.510e-11468.46Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A6H5L6H2_9PHAE4.200e-10863.69Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A835ZEY8_9STRA8.700e-7865.16Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A7S4D6K3_HETAK2.550e-7057.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2BVH9_9STRA7.270e-6358.01Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0Y381_AURAN2.910e-5570.32Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2HDB4_9STRA1.280e-5453.71Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A8J2SCG7_9STRA1.520e-5457.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3L6VNT2_9STRA1.210e-5354.11NYD-SP28 domain-containing protein n=2 Tax=Aphanom... [more]
A0A024TIJ1_9STRA8.150e-5154.90Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..258
NoneNo IPR availableCOILSCoilCoilcoord: 132..163
NoneNo IPR availableCOILSCoilCoilcoord: 191..218
NoneNo IPR availableGENE3D3.10.20.90coord: 2..115
e-value: 9.7E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR21625:SF0DYNEIN REGULATORY COMPLEX SUBUNIT 2coord: 104..278
IPR039505Dynein regulatory complex protein 1/2, N-terminalPFAMPF14772NYD-SP28coord: 129..222
e-value: 6.7E-19
score: 67.8
IPR039750Dynein regulatory complex proteinPANTHERPTHR21625NYD-SP28 PROTEINcoord: 104..278
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 54..91
score: 10.963
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 54..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47188contigH-elongata_contig47188:1609..4003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47188.11824.1mRNA_H-elongata_contig47188.11824.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47188 1609..4003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47188.11824.1 ID=prot_H-elongata_contig47188.11824.1|Name=mRNA_H-elongata_contig47188.11824.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
QSITVRDVDISTEDVSRLRRAWKASSFSSPATVFGASPNDLEPVGGIIEG
GVEDNVRFVFAGRDLEEGQPLERYSLGGGSTVQLLGRLKGGAQLGKVVKG
RSQAKKKGQDRPKEYAELQSKYAKMQEIDMARQQSMIAKADLRRRLEQEN
KNTKLNRLKIQNQWRKIMRLAKVESLRKNIEILSQNHERDVDRKDAIIQM
LDRDLEEAEDQFQAALRTHLQKMDGLIDLQDSRLLALEQEFEAELETLQG
EFADEREHVAIQHAAQIQELSDIVAAVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039505DRC1/2_N
IPR039750DRC1/DRC2
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf