mRNA_H-elongata_contig47167.11821.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47167.11821.1
Unique NamemRNA_H-elongata_contig47167.11821.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: D8LKV1_ECTSI (Coiled-coil domain-containing protein 94 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV1_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 6.410e-91
Identity = 204/317 (64.35%), Postives = 230/317 (72.56%), Query Frame = 1
Query:    1 GQGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVKYRSRHKGFRIAEKARMAAIAGESIFGPSQASSEQSHRQVLLVKAAKVGIKAHKMRLLEPDR-----EPPSAATRNRSSPRGGGSFIS---LERATLC------DAVPCDRKGCGNKIAVGAPKKRRK----AGLSSRAGTATGSVVGGLAA 897
            G+GTRFNATKDQAGTYYSTKIWQF+M+CPSCSN +VIKTDPKN+GYEYVEGIRKKDM FDPEEAET RVQDSEVS +LAVDPLYRLEHE+ D+RRA SRKTVLTRLTEL DA A+DDYS+NA LR+ MRA  XXXXXXXXXXXXXXXXXXXXXXXXX    AR VKYRSRHKGFR  EKA+MAAI GESIFG  + SSEQ+ R+ +LVKA+K+G+K   MRLL PD+     +   AAT+   S   G S  S   +  A+ C      D     R   G+ I     KKRR+    AG   R   A G  VG  AA
Sbjct:   61 GRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSNVMVIKTDPKNTGYEYVEGIRKKDMEFDPEEAETQRVQDSEVSKQLAVDPLYRLEHEQRDKRRAASRKTVLTRLTELADAHAQDDYSSNARLRQTMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSVKYRSRHKGFRTGEKAKMAAITGESIFGSGRESSEQARRKAVLVKASKLGLKTRGMRLLRPDQGSRCGDGERAATQRAPSRSLGASSCSRGSISGASACRHSEAPDGSRSSRSSDGSSILREDVKKRRRRPETAGAQGRGDGAQGVFVGSDAA 377          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A835Z9T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.010e-37
Identity = 84/193 (43.52%), Postives = 112/193 (58.03%), Query Frame = 1
Query:    1 GQGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVK--YRSRHKGFRIAEKARMAAIAGESIF 573
            G+GTRFNA K++AG Y++T +W F MRCPSCS + VIKTDPKNS YE+  GIR+K+  FD E+AE   + D +   +LA DP+YRLEH   D RRA ++KT +TRL +  +     DY ANA+LR+  R  +                         DA  AR +   + SR +  R  EK+R+AAI   SIF
Sbjct:   61 GKGTRFNAKKEKAGAYFTTTVWAFHMRCPSCSTEFVIKTDPKNSDYEFSAGIRRKEQHFDAEDAEAPVLADEDTQARLATDPMYRLEHADADVRRADAKKTRITRLMDWSNDVRGSDYDANAALRRAWRGARRERVALEAEAQARGLGVELLPHSEADAAAARAMDLGHSSRLRTMRATEKSRLAAIRASSIF 253          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A662WYR7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYR7_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.090e-33
Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 1
Query:    1 GQGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARK 396
            G+G RFNA K + G Y++T IW+F + C SC  ++V++TDP+  GY+ V G+RKK   FD E+AET RV + EV+ +L  DP YRLEHE +D+R A  R   L  L EL+DAQ KDDY++N+SLR  +R  K
Sbjct:   67 GRGVRFNAKKKRVGAYFTTAIWEFRLSCASCQGEMVVRTDPQQRGYDLVSGVRKKAEEFDAEQAETERVNNPEVAVRLHADPFYRLEHESEDKRAAGKRGKGLEELVELQDAQFKDDYASNSSLRAQLRGEK 198          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A484DZB4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZB4_BRELC)

HSP 1 Score: 137 bits (344), Expect = 2.680e-33
Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 1
Query:    1 GQGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARK 396
            G+G RFNA K QAG Y+++ IW+F M+CP+CS ++VI+TDPK  GYE + G+R+K    D EE +T R+ D  ++ KL  DP  RLEHE +D+R AT R   L  L EL+DA+ KDDY++N++LR   R +K
Sbjct:   67 GRGVRFNARKKQAGRYFTSTIWEFCMKCPNCSGEMVIRTDPKARGYELISGVRQKAAMEDAEERQTERLNDPGLTAKLQEDPFLRLEHENEDKRAATKRSRGLEALVELQDAEFKDDYASNSALRAQFRNKK 198          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A068TWZ1_COFCA (Uncharacterized protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068TWZ1_COFCA)

HSP 1 Score: 129 bits (324), Expect = 6.650e-30
Identity = 85/216 (39.35%), Postives = 111/216 (51.39%), Query Frame = 1
Query:    4 QGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVKYRSRHKGFRIAEKARMAAIAGESIFGPSQASSEQSHRQVLLVKAAKVGIKA 651
            +G RFNA K Q G+YYSTKIW FTM+   C +++VI+TDPKN  Y  + G RKK   FD E+AET  +   E  +KLA DP YRLEH+++D ++    + VL RL  + D++  DDY+ N SLR  +R +K                         DA  AR VK+   HK F    K + A I   SIF     SS    R  L  K  K+   A
Sbjct:   79 KGVRFNAEKKQVGSYYSTKIWSFTMKSACCKHEIVIQTDPKNCEYVIISGARKKIEEFDVEDAETMLLPVDEERSKLA-DPFYRLEHQEEDIKKKKEAEPVLVRLQRVSDSRHSDDYALNKSLRAKLRNQKKRVAEEEAASRKMGLGIRLLPASEDDAAAARSVKFA--HK-FDKNRKDKRALINAASIFSGYSGSSSSKRRVELESKRRKINAAA 290          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: UPI001FB10B6C (probable splicing factor YJU2B n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB10B6C)

HSP 1 Score: 129 bits (323), Expect = 8.370e-30
Identity = 82/212 (38.68%), Postives = 111/212 (52.36%), Query Frame = 1
Query:    4 QGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVKYRSRHKGFRIAEKARMAAIAGESIFGPSQASSEQSHRQVLLVKAAKV 639
            +G RFNA K Q G YYSTKIW F+M+ P C N++VI+TDPKN  Y  + G ++K   +D E+AET  +   E   KLA DP YRLEH++ D ++    + VL RL  + D++  DDYS N +LR  +R++K                         DA  A  V++   HK F    K + A I   SIFG S   S+ S R  L  K  K+
Sbjct:   67 KGVRFNAEKKQVGNYYSTKIWNFSMKAPCCKNEIVIQTDPKNCAYLIISGAQQKTEVYDVEDAETFELPADEEKGKLA-DPFYRLEHQEQDLKKKKEAEPVLVRLQRISDSRHSDDYSLNKALRSQLRSQKKRVREEEGTARKIGLGVRLLPASADDAAKAASVRFP--HK-FEKNRKEKRAQINSSSIFGGSSHYSD-SRRLELEAKRRKI 273          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A4P1R570_LUPAN (Uncharacterized protein n=6 Tax=Lupinus TaxID=3869 RepID=A0A4P1R570_LUPAN)

HSP 1 Score: 129 bits (323), Expect = 1.460e-29
Identity = 86/213 (40.38%), Postives = 109/213 (51.17%), Query Frame = 1
Query:    4 QGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVKYRSRHKGFRIAEKARMAAIAGESIF-GPSQASSEQSHRQVLLVKAAKV 639
            +G RFNA K Q G YYSTKIW FTM+   C +++VI+TDPKN  Y  + G +KK   FD E+AET  +   E   KL VDP YRLEHE+ D ++    + VL RL  L DA+  DDY+ N SLR  +R +K                         D  TA  VK+ S+   F    K + A I   SIF G S +SS    R  L  K  K+
Sbjct:   83 KGVRFNAEKKQVGNYYSTKIWNFTMKSACCKHEIVIQTDPKNCEYVIISGAQKKTEDFDVEDAETLELPADEERGKL-VDPFYRLEHEEKDLKKKKEAEPVLVRLQRLSDAKHSDDYAINRSLRTQLRNQKKRVAEEEASSRKRGLGIRLLPNSAQDVATAAKVKFSSK---FDRNTKNKRALINASSIFPGLSYSSSSDKRRLELESKRRKI 291          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A1Y2I388_9FUNG (CWC16 protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I388_9FUNG)

HSP 1 Score: 128 bits (322), Expect = 3.890e-29
Identity = 64/132 (48.48%), Postives = 86/132 (65.15%), Query Frame = 1
Query:    1 GQGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARK 396
            G GTR+NA K +AG YYST IW F M+C  C N   I+TDPKN+ YE VEG RK+   FDPE+A+   V   + + +LA DPLYRLEH   D+  A +R   +  L +++D+Q +DD+S+N  LR+  RA K
Sbjct:   62 GMGTRYNAEKKKAGNYYSTPIWSFRMKCHLCPNWFEIRTDPKNAEYEIVEGARKRVEEFDPEDAQVMAVNSEDNAERLAADPLYRLEHATKDKELARARAERIAELRDIQDSQFEDDFSSNQLLRRKFRAEK 193          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: A0A251VHP1_HELAN (Uncharacterized protein n=2 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251VHP1_HELAN)

HSP 1 Score: 127 bits (318), Expect = 4.280e-29
Identity = 82/212 (38.68%), Postives = 111/212 (52.36%), Query Frame = 1
Query:    4 QGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVKYRSRHKGFRIAEKARMAAIAGESIFGPSQASSEQSHRQVLLVKAAKV 639
            +G RFNA K Q G YYSTKIW FTM+   C +++VI+TDPKN+ Y  + G +KK   FD E+AET  +   E  +KLA DP YRLEH+++D ++    + +L RL  + DA+  DDY+ N SLR  +R++K                         D   A+ VK+ S    F      + A I   SIF  S ASS  S R  L  K  K+
Sbjct:   67 KGVRFNAEKKQVGNYYSTKIWNFTMKSACCQHEIVIQTDPKNTEYLVISGAQKKVEEFDTEDAETMALPVDEERSKLA-DPFYRLEHQEEDLKKKKEAEPLLVRLQRVSDARHLDDYAINKSLRAKLRSQKKRVAEEEVAARKMGLGIRLLPETKEDVAAAKRVKFSS---NFNKNRDEKRALIKSASIFSDSSASSS-SRRLELEAKRRKI 273          
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Match: UPI00053C80B2 (coiled-coil domain-containing protein 130 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C80B2)

HSP 1 Score: 127 bits (318), Expect = 5.300e-29
Identity = 80/206 (38.83%), Postives = 107/206 (51.94%), Query Frame = 1
Query:    4 QGTRFNATKDQAGTYYSTKIWQFTMRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVSNKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLRKGMRARKXXXXXXXXXXXXXXXXXXXXXXXXXDAETARGVKYRSRHKGFRIAEKARMAAIAGESIFGPSQASSEQSHRQVLL 621
            +G RFNA K Q G YYSTKIW FTM+   C  ++VI+TDPKN  Y  + G +KK   FD E+AET  +   E   KLA DP YRLEH++ D ++    + VL RL  + DA+  DDYS N +LR  +R+++                         DA  A  VK+ ++   F    K + A I   SIF  S  SS  S R++ L
Sbjct:   67 KGVRFNAEKKQVGNYYSTKIWNFTMKAACCKQEIVIQTDPKNCEYVIISGAQKKTEEFDVEDAETLELPAEEEKGKLA-DPFYRLEHQEVDLQKKKEAEPVLVRLQRISDARHADDYSRNRALRSQLRSQRKRIAEEEAASRKMGLGIRLLPKSEEDAAAASRVKFATK---FDKNRKDKRALIHASSIFPESAYSSSSSKRRLEL 268          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47167.11821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV1_ECTSI6.410e-9164.35Coiled-coil domain-containing protein 94 n=2 Tax=E... [more]
A0A835Z9T3_9STRA3.010e-3743.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662WYR7_9STRA1.090e-3350.76Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A484DZB4_BRELC2.680e-3350.00Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A068TWZ1_COFCA6.650e-3039.35Uncharacterized protein n=3 Tax=Coffea TaxID=13442... [more]
UPI001FB10B6C8.370e-3038.68probable splicing factor YJU2B n=2 Tax=Impatiens g... [more]
A0A4P1R570_LUPAN1.460e-2940.38Uncharacterized protein n=6 Tax=Lupinus TaxID=3869... [more]
A0A1Y2I388_9FUNG3.890e-2948.48CWC16 protein n=1 Tax=Catenaria anguillulae PL171 ... [more]
A0A251VHP1_HELAN4.280e-2938.68Uncharacterized protein n=2 Tax=Heliantheae allian... [more]
UPI00053C80B25.300e-2938.83coiled-coil domain-containing protein 130 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47167contigH-elongata_contig47167:1071..3826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.8
Seed ortholog evalue7.8e-64
Seed eggNOG ortholog2880.D8LKV1
KEGG koko:K13115
EggNOG free text desc.response to virus
EggNOG OGsCOG5134@1,KOG2990@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCWC16 protein
Ec32 orthologEc-11_005670.1
Exons3
Model size1640
Cds size843
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47167.11821.1prot_H-elongata_contig47167.11821.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47167 1793..3751 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930778.231271-UTR-H-elongata_contig47167:1070..17921622930778.231271-UTR-H-elongata_contig47167:1070..1792Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47167 1071..1792 -
1691679566.0407581-UTR-H-elongata_contig47167:1070..17921691679566.0407581-UTR-H-elongata_contig47167:1070..1792Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47167 1071..1792 -
1622930778.2864518-UTR-H-elongata_contig47167:3751..38261622930778.2864518-UTR-H-elongata_contig47167:3751..3826Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47167 3752..3826 -
1691679566.0856352-UTR-H-elongata_contig47167:3751..38261691679566.0856352-UTR-H-elongata_contig47167:3751..3826Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47167 3752..3826 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930778.24482-CDS-H-elongata_contig47167:1792..22811622930778.24482-CDS-H-elongata_contig47167:1792..2281Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47167 1793..2281 -
1691679566.0556912-CDS-H-elongata_contig47167:1792..22811691679566.0556912-CDS-H-elongata_contig47167:1792..2281Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47167 1793..2281 -
1622930778.255733-CDS-H-elongata_contig47167:2973..31641622930778.255733-CDS-H-elongata_contig47167:2973..3164Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47167 2974..3164 -
1691679566.0668426-CDS-H-elongata_contig47167:2973..31641691679566.0668426-CDS-H-elongata_contig47167:2973..3164Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47167 2974..3164 -
1622930778.2693264-CDS-H-elongata_contig47167:3588..37511622930778.2693264-CDS-H-elongata_contig47167:3588..3751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47167 3589..3751 -
1691679566.0767024-CDS-H-elongata_contig47167:3588..37511691679566.0767024-CDS-H-elongata_contig47167:3588..3751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47167 3589..3751 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47167.11821.1

>prot_H-elongata_contig47167.11821.1 ID=prot_H-elongata_contig47167.11821.1|Name=mRNA_H-elongata_contig47167.11821.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp
MRCPSCSNDLVIKTDPKNSGYEYVEGIRKKDMAFDPEEAETARVQDSEVS
NKLAVDPLYRLEHEKDDRRRATSRKTVLTRLTELKDAQAKDDYSANASLR
KGMRARKRKDRKEEDEAKARGLGIRLATPSPADAETARGVKYRSRHKGFR
IAEKARMAAIAGESIFGPSQASSEQSHRQVLLVKAAKVGIKAHKMRLLEP
DREPPSAATRNRSSPRGGGSFISLERATLCDAVPCDRKGCGNKIAVGAPK
KRRKAGLSSRAGTATGSVVGGLAAIADLYN*
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mRNA from alignment at H-elongata_contig47167:1071..3826-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47167.11821.1 ID=mRNA_H-elongata_contig47167.11821.1|Name=mRNA_H-elongata_contig47167.11821.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2756bp|location=Sequence derived from alignment at H-elongata_contig47167:1071..3826- (Himanthalia elongata Himel1 dioecious)
GGCCAGGGAACGCGCTTCAACGCGACCAAGGATCAGGCGGGGACTTACTA CAGCACGAAGATATGGCAGTTCACCATGAGGTGTCCCTCTTGCAGCAACG ACCTAGTCATCAAGACGGACCCCAAGAACAGCGGCTACGAGTACGTGGAG GGCATCCGCAAAAAGGATATGGCGTTCGATCCGGAGGAGGCGGAGACCGC ACGCGTCCAGGACAGCGAGGTTTCCAACAAGCTGGCAGGTTAGAGGCAGT GGCGGAAAGGGGGGTTACGTGAAGGTCGGTACGCTTCCGCTACTACCGCA CCTGCTGAAACCGTAATGGTCCTTTCGCTGCGTTGCCCAAGTTATCCCCG TGTGCGCATTTAAAATACATTTTTTTCCTGGTAGATGAACCAAAAACTGA CGTCACATGAGTTAACTCATAACTAAATAGTACTTTTTCTCTGTCTCTGA GTGTCTCTCCAGCATGGACAAGTTTCCTCAACTCCACCGCGTTGCGCTCA TAAACATGAAGGAAACGCACATCGACTCTTGATTGTTCTTGACCCTCCCA GCCCTTGGGGTAGCACCGTGGACGGGAATGCTTTTTCTTCTTGCCGCCGC TTCACCGTCGCTACCGTCCACGCCCCTTTCTTGACCGACCCTTCCTCAAT GTGCGCTCGCAGTGGATCCTCTTTACCGCCTGGAGCACGAGAAGGACGAC AGGCGTCGAGCGACGTCGAGGAAAACTGTGCTGACTCGGCTGACAGAGCT AAAGGACGCGCAAGCCAAGGACGATTACTCCGCGAACGCAAGCTTGCGGA AGGGGATGAGGGCTAGGAAGAGGAAAGACCGAAAGGAGGAAGACGAGGCC AAGGTAGAGGCGCAAGGGGCCGACGGCGATAAATTTGTGTCTTTGTGTAT ATATATGTGTGTGTGTGTGTGTGTGTTTGTATATTTTTATTTTAAAATAC TTTATTGTTTATAACTTTATTATGGAGCACCGGTATACAGCTATTCCGTT TAACGTGTTATCCTAGGTTGCCAATCCCACCTACCACAACGCTATTCCCA TCCCTACCGCCTGTGGTTTTAAGGGTTCGATCAATTTCTCCCTGGTTTGT TCACGCCTCCATATATATATATATATATTAAAAAAAATGCAAGTTCAGTA CTTGCATTCATACACCCCGACAACCTCTTGTTGAAATTTTTCTTGGTCCC GCTCTCACATCTCACCTCTCACCTTTCCGCGTCAGAAACAAAATCAGGAC ATCCCTATCATAGTTAGGATCGAAGTCACGATACTTTAATACTCTAAAAT AATTGAACCACTCGGGCGGCAGAGAAGAAATAAGCGATGTCGTTCAGAGT TACGGTAGTTCTTTGGACAGTAGGAATATTATTTTCTCGAGAAATAATAT TTCTCGCGAAATTGGGAGCTCGGACGTGTTTAAGGGATACCTCTCGACCT CCGATTCCTTCCAGGTCATGGCATCCCCCGCTCTTATGCAACTAATTAGA TGTTCGTGGTTCATGTCCGTTTTTGTTTCTCTTTTCATTGTCTAGGCGCG AGGACTGGGTATACGCCTGGCCACCCCGAGCCCGGCAGACGCCGAGACCG CACGCGGCGTAAAATACCGCAGCCGTCACAAGGGATTTCGAATCGCCGAG AAGGCAAGAATGGCTGCGATAGCGGGTGAATCGATCTTTGGCCCGAGCCA GGCGTCATCCGAGCAGTCCCATCGACAGGTGCTGCTCGTAAAAGCCGCCA AGGTTGGTATCAAGGCGCACAAGATGCGCTTGCTCGAACCTGATCGCGAG CCTCCGTCGGCCGCGACGAGAAACCGCTCGTCCCCGCGAGGCGGCGGGTC GTTTATTTCTTTGGAGCGCGCAACGTTGTGTGATGCGGTGCCGTGTGATC GCAAGGGCTGCGGGAATAAAATTGCCGTAGGCGCACCAAAAAAACGTCGG AAAGCAGGGCTGTCGTCAAGAGCAGGAACCGCTACAGGGAGTGTCGTTGG TGGCCTCGCAGCTATCGCAGATTTGTACAACTGAGACCCGGTTCTGCTCG ACGCGCAGACTCTTGCGACGAGATCATTTAGGGGGTGATTGAAGCGATTG TAAAAACTGTAGCGTAGGTAGAATTTTGCGCTGGGGGAAGGCGGGAGTGC TAATAACTAATCACCGGAATGCCTGATATGTGATGCTGAAGGGTGTTAGG CCTTGAATGAGCCAAATAACAAGATTGCGAATGTGCGAATTGGTACCATT GACGCCTGTAAGGACACTGGCAGGTTTCGCCTAGGAGACGAATCGAATTT ACAAGTGGTGTATGTATGTATGTACTGTATATATGTATGGCCATCACATT TAGCAGAGTAAGATCAATCGAGCTTGGTTGCCCTCTGCTCGTGGTCAGCT AGAGAGGGAAAATACATTTCCCCTCTGCCCGTTCGCGCCTGAGAATTTCG TTTCGCGAGACGGCTTCAGCCTGCTCATTCTCTCAATCCAGGCTGAATCT GGTGTGTACTCCCGGGATCCCCTCGTTTTCTGCGACGGCCTCCATTTCTA CCGTCAACCGTATTACGCTTTCAACTTTTGCGGATACGAATATGGATAGC GTAAACGTGTCTCTACAGATGCAGCGTAGATGCTAGGAGAGAAAGGCATT AAGACTGTCCAACATTGTTATGCGATTTGTCCACCGACAAACTCCCTCAG ATGTTTAAATGCCTCCAATCGCATATTCACACGTGAGCTCTATGTAATAC CCTGGT
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Coding sequence (CDS) from alignment at H-elongata_contig47167:1071..3826-

>mRNA_H-elongata_contig47167.11821.1 ID=mRNA_H-elongata_contig47167.11821.1|Name=mRNA_H-elongata_contig47167.11821.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1686bp|location=Sequence derived from alignment at H-elongata_contig47167:1071..3826- (Himanthalia elongata Himel1 dioecious)
ATGAGGTGTCCCTCTTGCAGCAACGACCTAGTCATCAAGACGGACCCCAA
GAACAGCGGCTACGAGTACGTGGAGGGCATCCGCAAAAAGGATATGGCGT
TCGATCCGGAGGAGGCGGAGACCGCACGCGTCCAGGACAGCGAGGTTTCC
AACAAGCTGGCAGATGAGGTGTCCCTCTTGCAGCAACGACCTAGTCATCA
AGACGGACCCCAAGAACAGCGGCTACGAGTACGTGGAGGGCATCCGCAAA
AAGGATATGGCGTTCGATCCGGAGGAGGCGGAGACCGCACGCGTCCAGGA
CAGCGAGGTTTCCAACAAGCTGGCAGTGGATCCTCTTTACCGCCTGGAGC
ACGAGAAGGACGACAGGCGTCGAGCGACGTCGAGGAAAACTGTGCTGACT
CGGCTGACAGAGCTAAAGGACGCGCAAGCCAAGGACGATTACTCCGCGAA
CGCAAGCTTGCGGAAGGGGATGAGGGCTAGGAAGAGGAAAGACCGAAAGG
AGGAAGACGAGGCCAAGTGGATCCTCTTTACCGCCTGGAGCACGAGAAGG
ACGACAGGCGTCGAGCGACGTCGAGGAAAACTGTGCTGACTCGGCTGACA
GAGCTAAAGGACGCGCAAGCCAAGGACGATTACTCCGCGAACGCAAGCTT
GCGGAAGGGGATGAGGGCTAGGAAGAGGAAAGACCGAAAGGAGGAAGACG
AGGCCAAGGCGCGAGGACTGGGTATACGCCTGGCCACCCCGAGCCCGGCA
GACGCCGAGACCGCACGCGGCGTAAAATACCGCAGCCGTCACAAGGGATT
TCGAATCGCCGAGAAGGCAAGAATGGCTGCGATAGCGGGTGAATCGATCT
TTGGCCCGAGCCAGGCGTCATCCGAGCAGTCCCATCGACAGGTGCTGCTC
GTAAAAGCCGCCAAGGTTGGTATCAAGGCGCACAAGATGCGCTTGCTCGA
ACCTGATCGCGAGCCTCCGTCGGCCGCGACGAGAAACCGCTCGTCCCCGC
GAGGCGGCGGGTCGTTTATTTCTTTGGAGCGCGCAACGTTGTGTGATGCG
GTGCCGTGTGATCGCAAGGGCTGCGGGAATAAAATTGCCGTAGGCGCACC
AAAAAAACGTCGGAAAGCAGGGCTGTCGTCAAGAGCAGGAACCGCTACAG
GGAGTGTCGTTGGTGGCCTCGCAGCTATCGCAGATTTGTACAACTGAGCG
CGAGGACTGGGTATACGCCTGGCCACCCCGAGCCCGGCAGACGCCGAGAC
CGCACGCGGCGTAAAATACCGCAGCCGTCACAAGGGATTTCGAATCGCCG
AGAAGGCAAGAATGGCTGCGATAGCGGGTGAATCGATCTTTGGCCCGAGC
CAGGCGTCATCCGAGCAGTCCCATCGACAGGTGCTGCTCGTAAAAGCCGC
CAAGGTTGGTATCAAGGCGCACAAGATGCGCTTGCTCGAACCTGATCGCG
AGCCTCCGTCGGCCGCGACGAGAAACCGCTCGTCCCCGCGAGGCGGCGGG
TCGTTTATTTCTTTGGAGCGCGCAACGTTGTGTGATGCGGTGCCGTGTGA
TCGCAAGGGCTGCGGGAATAAAATTGCCGTAGGCGCACCAAAAAAACGTC
GGAAAGCAGGGCTGTCGTCAAGAGCAGGAACCGCTACAGGGAGTGTCGTT
GGTGGCCTCGCAGCTATCGCAGATTTGTACAACTGA
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