prot_H-elongata_contig47128.11815.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47128.11815.1
Unique Nameprot_H-elongata_contig47128.11815.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47128.11815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..124
e-value: 5.1E-6
score: 28.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..40
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..40
score: 0.453
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47128contigH-elongata_contig47128:3218..4013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47128.11815.1mRNA_H-elongata_contig47128.11815.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47128 2831..4058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47128.11815.1 ID=prot_H-elongata_contig47128.11815.1|Name=mRNA_H-elongata_contig47128.11815.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
MELLLKAGRLRGIRNRSCRDLSRGQLLCLVLCVEVAHALADRVTGGECKV
EKLPAPVLCLDEFLETEDARVRRGVEGVCASLCLLGVTIVFATHVMDHVE
GMITSSATTSSTKVIRRHSRRGSSGGASGRVATFTGGQTSELRQLEECTY
VDWKRTDDARRRAQRVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase