prot_H-elongata_contig114797.1179.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114797.1179.1
Unique Nameprot_H-elongata_contig114797.1179.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length206
Homology
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: D8LL95_ECTSI (Coatomer subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL95_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 4.920e-122
Identity = 184/205 (89.76%), Postives = 195/205 (95.12%), Query Frame = 0
Query:    1 GSRLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            GSRLLYVRDRYLRVHELQ+GRDHPLVS+RRPGQSQGASLGQGPR LQHN FNPAESNVLVTYD DGGCY+LLTF SM+GA+NG   DPNE RRGSCLA VF+ARNRFAVLDKNRQILIKNFSNEVTKK TPPHP+TDG+HFGGTSGRLLLRCEDR+TLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHT+VIA+KQLDQL
Sbjct:  333 GSRLLYVRDRYLRVHELQTGRDHPLVSMRRPGQSQGASLGQGPRMLQHNAFNPAESNVLVTYDSDGGCYELLTFGSMDGASNGVGADPNELRRGSCLAAVFLARNRFAVLDKNRQILIKNFSNEVTKKLTPPHPNTDGLHFGGTSGRLLLRCEDRITLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTVVIASKQLDQL 537          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: A0A6H5KXQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXQ0_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.960e-103
Identity = 156/178 (87.64%), Postives = 166/178 (93.26%), Query Frame = 0
Query:   28 LRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            +RRPGQSQGASLGQGPR LQHN FNPAE NVLVTYD DGGCY+LLTF SM+GA+NG   DPNE RRGSCLA VF+ARNRFAVLDKN QILIKNFSNEVTKK TPPHP+TDG+HFGGTSGRLLLRCEDR+TLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHT+VIA+KQLDQL
Sbjct:    1 MRRPGQSQGASLGQGPRMLQHNAFNPAECNVLVTYDSDGGCYELLTFGSMDGASNGVGADPNELRRGSCLAAVFLARNRFAVLDKNHQILIKNFSNEVTKKLTPPHPNTDGLHFGGTSGRLLLRCEDRITLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTVVIASKQLDQL 178          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: A0A835Z8J6_9STRA (Coatomer subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J6_9STRA)

HSP 1 Score: 281 bits (718), Expect = 2.140e-84
Identity = 137/202 (67.82%), Postives = 167/202 (82.67%), Query Frame = 0
Query:    4 LLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            L YV+DRYLR+HE Q+GRD P+VSLRR GQ Q ++LGQ PRSLQ+N +NPAESNVL+  D++GG Y+LL+F++      GS  +P + RRGS LA VF+ARNRFAVLDKNRQILIKNF NEVTKK +PPHPSTDGM++ G +GRLLLRCEDR+TLY+QQSR+VLAEL VPRVKY FW+ D S VAL +KH IVIA+K L+Q+
Sbjct:  335 LFYVKDRYLRMHEYQTGRDAPVVSLRRAGQGQASALGQAPRSLQYNPYNPAESNVLIFSDVEGGSYELLSFSAEMPGGTGSG-EPQDVRRGSGLAAVFLARNRFAVLDKNRQILIKNFQNEVTKKVSPPHPSTDGMYYAGGAGRLLLRCEDRVTLYDQQSRRVLAELLVPRVKYVFWSQDSSKVALMTKHAIVIASKHLEQM 535          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: A0A7S2V4C4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C4_9STRA)

HSP 1 Score: 256 bits (653), Expect = 5.650e-77
Identity = 132/216 (61.11%), Postives = 162/216 (75.00%), Query Frame = 0
Query:    2 SRLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGAS---LGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSN---------TDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            +RL YV+DRYLRV E  +GRD P+VSLRR GQS  +S   LG GPRSLQ+N+FNPAESN+L+  D +GG Y+LLTF+                    +P + RRG  LA VFIARNRFAVLDKNRQ+L+KNF NEVTKK +PP+P+TD ++FGGTSGRLLLR EDR++L+EQQSR++L E+ VPRVKY FWN D S+VAL SKH I+IA KQ +QL
Sbjct:  334 NRLFYVKDRYLRVFEFATGRDMPVVSLRRVGQSGSSSTPGLGGGPRSLQYNSFNPAESNILLQLDSEGGSYELLTFSLSSXXXXXXXXXXXXXXXAAEPQDVRRGVGLAAVFIARNRFAVLDKNRQVLVKNFQNEVTKKVSPPNPATDSLYFGGTSGRLLLRGEDRVSLFEQQSRRLLGEVPVPRVKYVFWNQDQSMVALVSKHAILIANKQCEQL 549          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: A0A7S2RES0_9STRA (Coatomer subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES0_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.330e-75
Identity = 128/204 (62.75%), Postives = 159/204 (77.94%), Query Frame = 0
Query:    1 GSRLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNP-AESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLD 203
            G R+ YV+D+YLR+HE  SGRD P+VSLRR G S  +++G  PRSL +N+F+P AES+VLV  D+DGG Y+LLTF+    A  G+ ++P+   RG+CL+ VFIARNRFAVLDKNRQIL+KNF N+VTKK  PP+PSTDGM F G SGR+LL  EDRMTL++  SRKVLAELQVPRVKY  W++DCS VA  SKH IVI  +QL+
Sbjct:  334 GPRMFYVKDKYLRMHEFGSGRDVPVVSLRRGGHSGSSAIGSAPRSLSYNSFSPPAESSVLVCSDVDGGSYELLTFD----AEGGNPSEPSGTHRGNCLSAVFIARNRFAVLDKNRQILLKNFQNQVTKKLAPPNPSTDGMFFAGASGRVLLSSEDRMTLFDTHSRKVLAELQVPRVKYVVWSNDCSHVAFLSKHGIVITDRQLE 533          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: W7TRK7_9STRA (Coatomer subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 8.140e-74
Identity = 127/203 (62.56%), Postives = 156/203 (76.85%), Query Frame = 0
Query:    2 SRLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQ 204
            S + YV+D+YLR+HE +SGRD PLVSLRR G SQ   LG   R+LQ+N FNPAE+NVLV  D DGG Y+L+TF S E    G   D  + RRG  LA VFIARNRFAVLDK+RQ+LIKNF NEVTKK  PP+P+TD + F G SGR++LR ED++TL+EQQSR+V+AELQ PR+KY FWN D SLVAL  KH++V+AT+ L+Q
Sbjct:  335 SHMFYVKDKYLRLHEFESGRDLPLVSLRRAGVSQSNGLGNVIRTLQYNVFNPAENNVLVLSDTDGGSYELITF-STEPNGQG---DAQDVRRGPGLAAVFIARNRFAVLDKSRQVLIKNFQNEVTKKMAPPNPNTDSLLFAGVSGRVILRSEDKVTLFEQQSRRVIAELQAPRIKYIFWNKDGSLVALMGKHSLVVATRNLEQ 533          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: A0A7S3UV91_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV91_HETAK)

HSP 1 Score: 245 bits (626), Expect = 1.940e-73
Identity = 122/203 (60.10%), Postives = 151/203 (74.38%), Query Frame = 0
Query:    3 RLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            RL YV+DRYLR+ E  +GRD P+VSLRR GQ Q + LG  PR L +N FNP E+NVL+  D+DGG Y+L+TF     A+  +  +P + RRG+ LA  F+ARNRFAVLDKNRQILIKNF NEVTKK  PPHP TD + F G SGR+LL+ EDR+ L+EQQSR+VL E+QVPRVKY +W+ D + VAL SKH IV+A + L QL
Sbjct:  218 RLFYVKDRYLRMFEFATGRDAPVVSLRRAGQGQLSGLGGTPRGLSYNQFNPREANVLLQLDVDGGTYELVTFALDPSASQAA--EPQDLRRGAGLAAAFVARNRFAVLDKNRQILIKNFQNEVTKKVAPPHPQTDSLFFAGVSGRVLLKTEDRVVLFEQQSRRVLGEVQVPRVKYVYWSPDGARVALVSKHAIVLADRDLGQL 418          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: F0YHJ1_AURAN (Coatomer subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ1_AURAN)

HSP 1 Score: 236 bits (603), Expect = 1.510e-68
Identity = 120/203 (59.11%), Postives = 149/203 (73.40%), Query Frame = 0
Query:    3 RLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            R+ YV++RYLRVHE  + RD P +SLRR G SQG  LG GPRSL++N  NPAE N+L+  D DGG ++LL F+  E     S T+  + +RG  L+ VF+ARNRFA+LDKNRQI+IK+ SNE  K   PP+PSTD M F GTSGRLLLR +DR+ L+E QSR+VLAELQV R+KY  WN DCS VAL SKH I IA++ L+QL
Sbjct:  326 RMFYVKERYLRVHEFGTSRDVPTLSLRRAGHSQGG-LGSGPRSLEYNAMNPAECNLLLFSDHDGGTFELLAFS--EDTTTSSQTEHTDSKRGLALSAVFLARNRFAILDKNRQIIIKDLSNEKRKSVAPPNPSTDCMFFAGTSGRLLLRSDDRIMLFEPQSRRVLAELQVARIKYVIWNQDCSHVALISKHGITIASRDLEQL 525          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: A0A7R9UCR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR5_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.290e-67
Identity = 113/204 (55.39%), Postives = 148/204 (72.55%), Query Frame = 0
Query:    1 GSRLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQ 204
            G R+ YV+DRYLR H+  + RD  +VSL R G SQ   +G  PR+L +N FNPAESNVLV  D +GG YDLLT+ + + +  G  T+ ++ RRGS L+ VF+ARNRFAVLDK+RQI++KN  NE  K+  PP  S D + FGG SGR+L+R EDR+TL+EQ SR+VL ELQVPR+KY  WN DC+ VAL SKH++V+  + L+Q
Sbjct:  332 GGRMTYVKDRYLRQHDFGTSRDAAIVSLWRAGSSQTPGIGNSPRTLLYNHFNPAESNVLVLSDQEGGTYDLLTYPNGD-SFGGQGTEQSDTRRGSALSAVFLARNRFAVLDKSRQIIVKNLQNEEVKRLAPPQASADFLFFGGVSGRVLVRSEDRVTLFEQASRRVLGELQVPRIKYVVWNKDCTQVALLSKHSVVLCNRDLEQ 534          
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Match: F0YGR3_AURAN (Coatomer subunit alpha n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR3_AURAN)

HSP 1 Score: 230 bits (587), Expect = 2.280e-66
Identity = 119/203 (58.62%), Postives = 146/203 (71.92%), Query Frame = 0
Query:    3 RLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNTFNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVVFIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLLRCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATKQLDQL 205
            RL YV+DRYLRV+E    RD P +SLRR G   G+S+G  PRSL  N FN +E N+L+  + DGG Y+L+TF     A  G +T   E +RG  +A VFIARNR AVLDKNRQI+IK+F+NE  K   PP+PSTD M F GTSGRLLLR +DR+TL+E QSR+VLAELQ PRVKY  WN DC+ VAL SKH I IA++ ++QL
Sbjct:  336 RLFYVKDRYLRVYEYSPSRDVPALSLRRAGS--GSSIGGNPRSLDLNVFNASEDNILMFSESDGGTYELMTFQGESSATPGEST---EIKRGQGVAAVFIARNRIAVLDKNRQIIIKDFANEKRKSLAPPNPSTDRMFFAGTSGRLLLRSDDRITLFEPQSRRVLAELQSPRVKYVLWNKDCTYVALVSKHGITIASRDMEQL 533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114797.1179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL95_ECTSI4.920e-12289.76Coatomer subunit alpha n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KXQ0_9PHAE1.960e-10387.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8J6_9STRA2.140e-8467.82Coatomer subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2V4C4_9STRA5.650e-7761.11Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2RES0_9STRA3.330e-7562.75Coatomer subunit alpha n=1 Tax=Rhizochromulina mar... [more]
W7TRK7_9STRA8.140e-7462.56Coatomer subunit alpha n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S3UV91_HETAK1.940e-7360.10Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0YHJ1_AURAN1.510e-6859.11Coatomer subunit alpha n=1 Tax=Aureococcus anophag... [more]
A0A7R9UCR5_9STRA1.290e-6755.39Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
F0YGR3_AURAN2.280e-6658.62Coatomer subunit alpha n=1 Tax=Aureococcus anophag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006692Coatomer, WD associated regionPFAMPF04053Coatomer_WDADcoord: 40..203
e-value: 4.8E-28
score: 98.4
NoneNo IPR availablePANTHERPTHR19876:SF37COATOMER SUBUNIT ALPHA-1coord: 2..202
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 2..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114797contigH-elongata_contig114797:404..2031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114797.1179.1mRNA_H-elongata_contig114797.1179.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114797 404..2031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114797.1179.1 ID=prot_H-elongata_contig114797.1179.1|Name=mRNA_H-elongata_contig114797.1179.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
GSRLLYVRDRYLRVHELQSGRDHPLVSLRRPGQSQGASLGQGPRSLQHNT
FNPAESNVLVTYDIDGGCYDLLTFNSMEGAANGSNTDPNEQRRGSCLAVV
FIARNRFAVLDKNRQILIKNFSNEVTKKCTPPHPSTDGMHFGGTSGRLLL
RCEDRMTLYEQQSRKVLAELQVPRVKYTFWNHDCSLVALASKHTIVIATK
QLDQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006692Coatomer_WD-assoc_reg