prot_H-elongata_contig114785.1178.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114785.1178.1
Unique Nameprot_H-elongata_contig114785.1178.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A6H5L4K3_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K3_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.360e-33
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0
Query:    1 LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            L+SAET V+S+YYRL+SEYYK VGPPD+FYRSALMFLAYTP+E IP  ERYTLATDISLAALTG+GVFNFGEV++
Sbjct:  143 LESAETAVHSAYYRLSSEYYKTVGPPDAFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVLA 217          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A4D9CV45_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV45_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.240e-26
Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 0
Query:    1 LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            L  A+ +VYS+YYR ASEY+K VGPP++FY++ALM+LAYTP+E++  +E+ TLA DISLAALTGDGVFNFGEV+S
Sbjct:  144 LTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLS 218          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A7S1UCB7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCB7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.780e-26
Identity = 48/71 (67.61%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    5 ETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            +T V S YY+L+S YYK VGPP+SFY+ ALMFL YTPME++P +ERYTLATD+SLAA+TG+G++NFGEV++
Sbjct:  156 DTTVPSIYYQLSSTYYKLVGPPESFYKDALMFLVYTPMESVPQEERYTLATDLSLAAITGNGIYNFGEVLA 226          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A7R9YAW4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW4_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.550e-24
Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            L + +T V S +YRL+S YYK VGPP+SFYR AL+FL +TP E +P +E+YTLATD+SLAA+TG G++NFGEV++
Sbjct:  152 LSADDTTVPSIFYRLSSTYYKLVGPPESFYRDALLFLVFTPTEELPHEEQYTLATDLSLAAITGSGIYNFGEVLA 226          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: H3HCI8_PHYRM (PCI domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCI8_PHYRM)

HSP 1 Score: 102 bits (253), Expect = 1.630e-23
Identity = 49/75 (65.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            L  AE VV++SYYR+A +YY AVGP D FY++ALMFLAYT  + + PDER+ LA +IS+AALTGDGVFNFGEV++
Sbjct:  561 LVGAEPVVHASYYRVACDYYGAVGPADKFYKNALMFLAYTQYDEMRPDERFDLAVNISIAALTGDGVFNFGEVLA 635          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A7S2IIN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IIN6_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.380e-23
Identity = 45/73 (61.64%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    2 QSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVV 74
            +S   VV+S+YY  +  Y KAVGPP+++Y+ A+ FL+YTP+ ++PP  +YTLATD+SLAALTGDGVFNFGEVV
Sbjct:  180 ESDTAVVHSAYYETSMTYRKAVGPPEAYYKEAMQFLSYTPLPSLPPPRQYTLATDLSLAALTGDGVFNFGEVV 252          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A836CML5_9STRA (26S proteasome subunit like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML5_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.980e-23
Identity = 46/72 (63.89%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    4 AETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            A+T V+S+++ LA EYYK VGPP++F+RSALM+LAYTP+E++  + +  LATDISLAA+TGDGV+NFGEVV+
Sbjct:  147 ADTSVHSAHHLLACEYYKGVGPPEAFFRSALMYLAYTPLESMAAERQQQLATDISLAAITGDGVYNFGEVVA 218          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: A0A7S0CIL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIL2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.430e-23
Identity = 45/73 (61.64%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    3 SAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            S   VV+S++Y  ++ Y K VGPP++FY+ ALMFL YTP++++  +ERYTLATD+SLAALTG+GVFNFGEVV+
Sbjct:  167 SGSAVVHSAFYEASTAYRKRVGPPEAFYQEALMFLNYTPVDSMTVEERYTLATDLSLAALTGEGVFNFGEVVT 239          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: G4YXL1_PHYSP (PCI domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=G4YXL1_PHYSP)

HSP 1 Score: 99.0 bits (245), Expect = 7.140e-23
Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            L  AE VV++SYYR+A +YY A+GP D FY++ALMFLAYT  + + P+ER+ LA +IS+AALTGDGVFNFGEV++
Sbjct:  147 LVGAEPVVHASYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLA 221          
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Match: M4B5F7_HYAAE (PCI domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5F7_HYAAE)

HSP 1 Score: 99.0 bits (245), Expect = 7.140e-23
Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDERYTLATDISLAALTGDGVFNFGEVVS 75
            L  AE VV+++YYR+A +YY A+GP D FY++ALMFLAYT  + + P+ER+ LA +IS+AALTGDGVFNFGEV++
Sbjct:  147 LVGAEPVVHAAYYRVACDYYSALGPADKFYKNALMFLAYTQYDDMRPEERFDLAVNISIAALTGDGVFNFGEVLA 221          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114785.1178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4K3_9PHAE3.360e-3381.33PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CV45_9STRA1.240e-2668.00PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S1UCB7_9STRA3.780e-2667.61Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YAW4_9STRA7.550e-2461.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
H3HCI8_PHYRM1.630e-2365.33PCI domain-containing protein n=1 Tax=Phytophthora... [more]
A0A7S2IIN6_9STRA2.380e-2361.64Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A836CML5_9STRA4.980e-2363.8926S proteasome subunit like protein n=1 Tax=Tribon... [more]
A0A7S0CIL2_9STRA6.430e-2361.64Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
G4YXL1_PHYSP7.140e-2362.67PCI domain-containing protein n=18 Tax=Peronospora... [more]
M4B5F7_HYAAE7.140e-2361.33PCI domain-containing protein n=1 Tax=Hyaloperonos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 24..76
e-value: 2.1E-10
score: 42.6
IPR03529826S Proteasome non-ATPase regulatory subunit 13PANTHERPTHR1053926S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13coord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114785contigH-elongata_contig114785:165..395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114785.1178.1mRNA_H-elongata_contig114785.1178.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114785 165..395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114785.1178.1 ID=prot_H-elongata_contig114785.1178.1|Name=mRNA_H-elongata_contig114785.1178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
LQSAETVVYSSYYRLASEYYKAVGPPDSFYRSALMFLAYTPMETIPPDER
YTLATDISLAALTGDGVFNFGEVVSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035298PSMD13