prot_H-elongata_contig4655.11750.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4655.11750.1
Unique Nameprot_H-elongata_contig4655.11750.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
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BLAST of mRNA_H-elongata_contig4655.11750.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 7.050e-20
Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 0 
Query:    1 MIKGVDDISEAELRELASWFRARSGERRRLLKRYRAGRVKTEALAARKQAGGDMFASARGNKLPLKSASCRSTNSD 76
            M +GV+DI E +LRELA WF++RS ERRRLLKRY+ GR KTEALAARKQAGGD+FAS RG K+P K    R+  SD
Sbjct: 2441 MPRGVEDIPEKDLRELAKWFKSRSSERRRLLKRYKTGRQKTEALAARKQAGGDVFASVRG-KIPTKGGLARTPTSD 2515
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4655.11750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNU8_9PHAE7.050e-2067.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4655contigH-elongata_contig4655:6655..7865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4655.11750.1mRNA_H-elongata_contig4655.11750.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4655 4853..7972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4655.11750.1 ID=prot_H-elongata_contig4655.11750.1|Name=mRNA_H-elongata_contig4655.11750.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MIKGVDDISEAELRELASWFRARSGERRRLLKRYRAGRVKTEALAARKQA
GGDMFASARGNKLPLKSASCRSTNSDAGSVNSVRSERNGAVASNLSRPMV
RLEVGDGRGGRGNRGGGDTNRFKVPGPRDRPVSPRVPAAIGGRPGWV*
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