mRNA_H-elongata_contig46446.11738.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: D8LL65_ECTSI (Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL65_ECTSI) HSP 1 Score: 178 bits (451), Expect = 6.410e-48 Identity = 87/132 (65.91%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 292 YLKAGDPVLMLVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAV-------GSGDSTVSIWSHVRCCRERYENVLW 666
Y + + +LV+KDWCSFGHRFA R G+GR ++ SPIF QFLDATYQLLRQFP SFEFSENLLLLL+HAYHSRWFNDF DSEYER L++ARSS A +GD TVS+WS VR RE YEN+LW
Sbjct: 633 YYRTIEGFQVLVSKDWCSFGHRFAVRGGHGRQGAAESSPIFPQFLDATYQLLRQFPASFEFSENLLLLLLHAYHSRWFNDFLQDSEYERALAHARSSRAAPIGNGNGNNGDRTVSVWSQVRIRRELYENLLW 764
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: T0QJT8_SAPDV (Protein-tyrosine-phosphatase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QJT8_SAPDV) HSP 1 Score: 124 bits (310), Expect = 6.780e-29 Identity = 82/220 (37.27%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 103 GHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
G CAS+ F+GI N + FN L +A Q D + K RWLE I+++L+GA+ V ++L+ GD VL+ LV KDWCSFGH FA R + + SP+FLQFLDA YQL QFPT F+F+E L + A ++ WF F+ +SE ER R+ L + TVS+W VR E Y N L+
Sbjct: 508 GVACASIAFMGIDNIHVVRTSFNVLSQALY-QVDDTTFFSTLQKSRWLEHITSILQGATEVASHLERGDAVLVHCSDGWDRTSQLSALAQIMLDPYYRTLEGFAILVEKDWCSFGHMFAKRCAFPTS--DDTSPVFLQFLDAVYQLTLQFPTHFQFNEMFLATVADAVYTSWFGTFQKNSEKER-----RAFLDTVA---TVSVWDAVRASTESYLNPLF 716
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A835ZKR0_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKR0_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.190e-28 Identity = 78/205 (38.05%), Postives = 106/205 (51.71%), Query Frame = 1
Query: 7 MGVLRIIDCRSMISAWAHQIGGKGNENIARLGGHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM---------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYER 558
+ + I + M + AH++ + EN + + I AR Q LV A +D +H WL + +L+GA AV L+AGDPVL+ LV+KDW SFGH+FA RSG+G SPIF QFLDA +QLL+QFPT FEF+E LL +L+ A+H+RWF+DF +SE ER
Sbjct: 371 LSFMEIDNIHVMRALSAHRVRARVAENACCITIMSTFAERCFRIVRARRESQAH--LVRAARAADD-DSWFNSLHVSGWLTHVRNILRGAVAVARMLEAGDPVLVHCSDGWDRTNPYFRTIDGFRVLVSKDWGSFGHQFAARSGFGICEPGDASPIFSQFLDAVWQLLQQFPTEFEFAEELLHVLLAAWHARWFSDFNFNSERER 572
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: F0WE34_9STRA (Myotubularinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WE34_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.400e-28 Identity = 79/220 (35.91%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 103 GHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
G A +TF+GI N + F L +A ED + I K RWLE + ++L+GA V +L+ G+PVL+ L+ KDWCSFGH F R G+ + Q SPIFLQFLDA YQLL QFP F+F+E L ++ A +S WFN F+ +SE ER + +G S +S+W +R ++Y N L+
Sbjct: 640 GTPTACITFMGIDNIHVVRNSFTLLAQALYDVED-SNFFNAIQKSRWLEHVCSILQGAIEVATHLERGEPVLVHCSDGWDRTSQLCSLAQVMLDPYYRTMEGFAILIEKDWCSFGHMFRKRCGHPTS--DQSSPIFLQFLDAMYQLLIQFPIHFQFNELFLSMIAEAVYSSWFNTFQMNSERER-------QVVIGLVPS-LSVWDILRAATDKYRNPLY 848
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A812RUA9_SYMMI (MTMR4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RUA9_SYMMI) HSP 1 Score: 121 bits (304), Expect = 2.780e-28 Identity = 75/214 (35.05%), Postives = 114/214 (53.27%), Query Frame = 1
Query: 16 LRIIDCRSMISAWAHQIGGKGNENIARLGGHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERV 561
LRI+D R +I+A + + GKG+E I RLGG C +L+F GI N ++ + AL + C + + + +WL +S L+KG+ V +L+ GDPVL+ L++KD+ +FGH F RSG + SPIFLQFLDA +Q+ RQ P FEF+++LL L+ +A +R+ +DF D+E R+
Sbjct: 11 LRIVDARPIINAKGNALMGKGHEIIGRLGGEMCTTLSFAGIANIHVMRENYGALRQICCELTRSCNWFHMLQETKWLLHLSTLIKGSLVVALHLERGDPVLVHCSDGWDRTAQMVSLAQLMLDPYYRTIAGFRSLISKDFSTFGHMFHHRSGLVSPEEG--SPIFLQFLDAVWQIWRQMPWEFEFTDSLLELIAYAVGTRFTDDFVFDNEKSRL 222
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A024GBR2_9STRA (Uncharacterized protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A024GBR2_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.560e-28 Identity = 79/220 (35.91%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 103 GHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
G A +TF+GI N + F L +A ED + I K RWLE + ++L+GA V +L+ G+PVL+ L+ KDWCSFGH F R G+ + Q SPIFLQFLDA YQLL QFP F+F+E L ++ A +S WFN F+ +SE ER + +G S +S+W +R ++Y N L+
Sbjct: 3284 GTATACITFMGIDNIHVVRNSFTLLAQALYDVED-SNFFNAIQKSRWLEHVCSILQGAIEVATHLERGEPVLVHCSDGWDRTAQLCSLAQVMLDPYYRTMEGFAILIEKDWCSFGHMFRKRCGHPTS--DQSSPIFLQFLDAMYQLLVQFPIHFQFNELFLSMIAEAVYSSWFNTFQMNSERER-------QVVIGLVPS-LSVWDILRASTDKYRNPLY 3492
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A0P1AHU8_PLAHL (Myotubularin-related protein 2 isoform 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHU8_PLAHL) HSP 1 Score: 121 bits (304), Expect = 4.430e-28 Identity = 80/220 (36.36%), Postives = 111/220 (50.45%), Query Frame = 1
Query: 103 GHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVL--------------------------------MLVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
G A++TF+GI N + N L +A ED + + K RWLE I ++L+GAS V +L+ GD VL ML+ KDWCSFGH F R + + Q SPIFLQF+DA YQL QFPT F+F+E LL + A +S W+ F+ +SE ER L S++A +VS+W +R ++Y N L+
Sbjct: 673 GVSTAAITFMGIDNIHVVRNSLNGLAQALYEVED-SNFFGAVQKSRWLEHICSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQIMLDPYYRTLEGFAMLIEKDWCSFGHNFQKRCSHPTS--DQTSPIFLQFIDAVYQLTLQFPTHFQFNELLLSSVAEAVYSSWYGTFQKNSENERRLFL--STVA------SVSVWDVIRATTDQYLNPLF 881
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A1V9Y998_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y998_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.020e-28 Identity = 80/220 (36.36%), Postives = 109/220 (49.55%), Query Frame = 1
Query: 103 GHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
G CAS+ F+GI N + FN L +A Q D + K RWLE I+++L+GA+ + ++L+ GD VL+ LV KDWCSFGH FA R + + SP+FLQFLDA YQL QFPT F+F+E L + A ++ WF F+ +SE +R S+A TVS+W VR E Y N L+
Sbjct: 64 GVPCASIAFMGIDNIHVVRTSFNVLSQALY-QVDDTTFFSTLQKSRWLEHITSILQGATEMASHLERGDAVLVHCSDGWDRTSQLSALAQLMLDPFYRTIEGFAILVEKDWCSFGHMFAKRCAFPTS--DDTSPVFLQFLDAVYQLTLQFPTHFQFNEMYLATVADAVYTSWFGTFQKNSEKDRKTFV--ESVA------TVSLWDTVRASTESYLNPLF 272
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A421FNX7_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FNX7_9STRA) HSP 1 Score: 117 bits (294), Expect = 9.200e-27 Identity = 74/216 (34.26%), Postives = 108/216 (50.00%), Query Frame = 1
Query: 115 ASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
A++TF+GI N + L +A ED + + K RWLE + ++L+GAS V +L+ GD VL+ L+ K+WCSFGH F R G+ + Q SPIFLQF+DA YQL QFPT F+++E LL + A +S W+ F+ +SE ER L S ++VS+W +R ++Y N L+
Sbjct: 581 AAITFMGIDNIHVVRNSLAGLAQALYEVED-SNFFGSVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQMMLDPYYRTLEGFAILIEKEWCSFGHMFQKRCGHSTS--DQTSPIFLQFIDAVYQLTLQFPTHFQYNELLLSSVAEAVYSSWYGTFQKNSECERRLFL--------SNVASVSVWDVIRASTDQYLNPLF 785
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Match: A0A1V9ZP43_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZP43_9STRA) HSP 1 Score: 117 bits (294), Expect = 9.300e-27 Identity = 78/220 (35.45%), Postives = 108/220 (49.09%), Query Frame = 1
Query: 103 GHKCASLTFLGIPNARENQQIFNALVEACSTQEDYPDRLIDIHKLRWLEKISALLKGASAVCAYLKAGDPVLM--------------------------------LVAKDWCSFGHRFATRSGYGRNRKSQVSPIFLQFLDATYQLLRQFPTSFEFSENLLLLLIHAYHSRWFNDFRHDSEYERVLSYARSSLAVGSGDSTVSIWSHVRCCRERYENVLW 666
G CAS+ F+GI N + FN L +A Q D + K RWLE I+++L+GA+ V ++L+ GD VL+ LV KDWCSFGH FA R + + SP+FLQF+DA YQL QFPT F+F+E L + A ++ W+ F+ + E ER + AV T+S+W VR E Y N L+
Sbjct: 514 GFTCASIAFMGIDNIHVVRTSFNQLSQALY-QVDDTTFFSTLQKSRWLEHINSVLQGAAEVASHLERGDAVLVHCSDGWDRTSQLSALAQLMLDPYYRTLEGFAVLVEKDWCSFGHMFAKRCAFPTS--DDTSPVFLQFVDAVYQLTVQFPTHFQFNEMFLAAVADAVYTSWYGTFQKNCERER----REFTEAV----PTISLWDTVRASTESYLNPLF 722 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46446.11738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46446.11738.1 >prot_H-elongata_contig46446.11738.1 ID=prot_H-elongata_contig46446.11738.1|Name=mRNA_H-elongata_contig46446.11738.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp MGVLRIIDCRSMISAWAHQIGGKGNENIARLGGHKCASLTFLGIPNARENback to top mRNA from alignment at H-elongata_contig46446:1763..3319- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46446.11738.1 ID=mRNA_H-elongata_contig46446.11738.1|Name=mRNA_H-elongata_contig46446.11738.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1557bp|location=Sequence derived from alignment at H-elongata_contig46446:1763..3319- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46446:1763..3319- >mRNA_H-elongata_contig46446.11738.1 ID=mRNA_H-elongata_contig46446.11738.1|Name=mRNA_H-elongata_contig46446.11738.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1320bp|location=Sequence derived from alignment at H-elongata_contig46446:1763..3319- (Himanthalia elongata Himel1 dioecious)back to top |