prot_H-elongata_contig46347.11725.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46347.11725.1
Unique Nameprot_H-elongata_contig46347.11725.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length226
Homology
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BLAST of mRNA_H-elongata_contig46347.11725.1 vs. uniprot
Match: D8LL17_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL17_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 2.560e-77
Identity = 141/226 (62.39%), Postives = 168/226 (74.34%), Query Frame = 0 
Query:    1 RTAGCLRLIQDFLGMPKDLFTTEAAMTSARFEQKRAELLLYKLLNQVDSPAARMKRLLMRDFERDASNASDVASLMDVTSSRLRSLKEFVLDQHEQQLFAFAEAPISSASASGSASISREARRATTRKAVRRQVELSLYLPLRRCLWKELLLRLKGPARRLQKAIKALRQSPPSVFGVENPGVFTAREWGPAIETMGQATRRALPTDQIEGLHRAAEHIAALHSSL 226
            R +G L ++QDFLG P+DLF  + A++ A  +QKRAELLLY+LLNQ DSPAARMK LLMRDFE D S A DV SLM   SSRLR L++FVLD HE+QL             S  A  + E R A  RKAVRRQVELSLYLPLRRCLWKEL  R++ PAR+L++AI+ALR+SPP+VFG+E  GV  ++EWGP  E MGQATR  LPTDQI+GL RAAEH+ ALH+SL
Sbjct:  569 RCSGALHIVQDFLGRPEDLFNADLALSPALRDQKRAELLLYRLLNQADSPAARMKHLLMRDFESDTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQL-------------SSCAYTTSETREAIVRKAVRRQVELSLYLPLRRCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVLASKEWGPVKEVMGQATRNVLPTDQIDGLRRAAEHLTALHASL 781
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46347.11725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL17_ECTSI2.560e-7762.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46347contigH-elongata_contig46347:482..3524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46347.11725.1mRNA_H-elongata_contig46347.11725.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46347 482..3524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46347.11725.1 ID=prot_H-elongata_contig46347.11725.1|Name=mRNA_H-elongata_contig46347.11725.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
RTAGCLRLIQDFLGMPKDLFTTEAAMTSARFEQKRAELLLYKLLNQVDSP
AARMKRLLMRDFERDASNASDVASLMDVTSSRLRSLKEFVLDQHEQQLFA
FAEAPISSASASGSASISREARRATTRKAVRRQVELSLYLPLRRCLWKEL
LLRLKGPARRLQKAIKALRQSPPSVFGVENPGVFTAREWGPAIETMGQAT
RRALPTDQIEGLHRAAEHIAALHSSL
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