mRNA_H-elongata_contig114727.1172.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 226 bits (577), Expect = 9.090e-66 Identity = 138/366 (37.70%), Postives = 202/366 (55.19%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEA--CRDSRKQIGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSC-FPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVT-----TTSIIPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITYGG 1083
EP T+ +A+AS EWPQW+ AI ++ G W++ E+P V+G+ VFK K D G I KYK RLVAQGF Q+ G+ Y ++ +P +SIR++ ++ A WE Q+DV AYL D+E E++++ P +++ L K +YGL A W KK F GF S D VF R + ++ V VDDL +A A DE ++ F + DL + + LG I RDR T+ Q YI T++ +F + TT+I PS SL+ SP T + ++MR I YRE +G+L++AA TR D+S+A L +F NPG HW AA++ ++YL T++ +TYGG
Sbjct: 29 EPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIA-ANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSF----SLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG 389
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A2P6SMQ0_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SMQ0_ROSCH) HSP 1 Score: 230 bits (586), Expect = 3.090e-65 Identity = 130/362 (35.91%), Postives = 213/362 (58.84%), Query Frame = 1
Query: 4 DPEPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEACRDSRKQ--IGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVTTTSI--IPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITY 1077
D +P + +A S++ W +A+ ++D GVW++V+ + +G + VFK K D G IE++K RLVA+GF Q +GI++ E+ SP + S R++++++A E Q+DV A+L ++E E+++ PE ++ K+ + LKK++YGL A W KKF + GF + D CV+ +++ G + +++YVDD+L+A + + + L S F +K+L +ASY LG I RDR G L Q YI ++++FG+ T + +P + G K L+K+ P+T+ E EM IPY +VG+L++A TR D+SFA L +F NPG HW A ++ L+YL RT+D + Y
Sbjct: 245 DNDPTSFKQATGSNDSDAWTQAMIAELDSMYKNGVWELVKPKENHKPIGCKWVFKTKRDVSGNIERHKARLVAKGFTQKEGIYFTETFSPVSTKDSFRIIMALVAHYDMELHQMDVKTAFLNGELEEEIFMVQPEGFIEAGKENMVCRLKKSIYGLKQASRQWYKKFDSVVSSFGFTENLVDECVYLKVV-GNNFIFLILYVDDILLASSNVKLLKDTKAFLSSNFDMKELGEASYVLGIEIKRDRKQGLLGLSQQNYISKILKRFGMETCANGEVPMSKGDK-LTKNQCPKTENEKTEMESIPYARLVGSLMYAQVCTRPDLSFAVGMLSRFQSNPGHEHWTAGKKVLRYLQRTKDYMLVY 604
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI) HSP 1 Score: 224 bits (572), Expect = 3.320e-65 Identity = 127/363 (34.99%), Postives = 211/363 (58.13%), Query Frame = 1
Query: 1 LDPEPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPE--ACRDSRKQIGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVTTTSI--IPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITY 1077
L+ +PI++ + + SS +W +A+ +M GVW +VE PK +G + +FK K D G I +YK RLVA+GF Q +GI Y+E+ SP ++ S R++++++A E Q+DV A+L +++ +Y+ PE DS++ + LK+++YGL A W +KF + GF+ + D C++ + G+ +++V+YVDD+L+A + + +R L S F +KDL AS+ LG I RDR+ G L Q YI V+ +FG++ + P A G K S P+ + E ++M + PY VG+L++A TR DI++ L ++ NPG HW+ A++ ++YL RT+D +TY
Sbjct: 3 LEDDPISLSQVKQSSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDK-FSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTY 363
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 226 bits (576), Expect = 6.640e-65 Identity = 132/365 (36.16%), Postives = 208/365 (56.99%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEACRDSRKQ--IGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVF-RRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVT-----TTSIIPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITYG 1080
+P ++ +A S+EWP+WK AI ++M + G + +VE PK ++G++ VF+ K + + IE YK RLVAQGF Q+ GI + E+ +P ASI ++L++ A WE Q+DV AYL D+E E+Y++ P + K+ + LK+ +YGL + + KK E + G S+ D CVF R ++++I + VDD +A TK R++ + F + DL + + LG + RDR+ TL QH YI ++ +F + TT + P G LS P T + E+M+ IPYRE++G+L++AA TR DI++A L +F NPG HW AA++ +YL TR+ +T+G
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIA-GTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDP----GTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFG 470
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR) HSP 1 Score: 217 bits (553), Expect = 1.910e-63 Identity = 121/359 (33.70%), Postives = 206/359 (57.38%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEACRDSRKQ--IGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVTTTS-IIPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITY 1077
+P + +A S + +W A+ +++ VW++VE +G + V+K K+D +G +E++K RLVA+G+ Q +GI Y+E+ SP + S+R+V++++A E Q+DV A+L ++ ++Y+ PE + K+ + LKK+ YGL A W KF + GF ++Q D C + + + G+ ++V+YVDD+L+A + ++ R L S F +KDL +ASY +G I RDR +GTL Q YI V+ ++ + S ++ G P+T+ E E+MR IPY +VG++++A TR DI++ A L ++ NPG HW+A ++ L+YL T+D +TY
Sbjct: 35 DPSSYNEAITSDQSSEWHNAMIDELESMDKNNVWELVELLNGAKPVGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYLK-MSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRYLQGTKDYKLTY 392
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A2N9FET2_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FET2_FAGSY) HSP 1 Score: 220 bits (560), Expect = 3.830e-63 Identity = 132/362 (36.46%), Postives = 203/362 (56.08%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEA--CRDSRKQIGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVTT--TSIIPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITYGG 1083
+P T +A + +W A+ + D GVW++V+R + V+G + +FKRK D G++EK+K RLVA+G+ Q G+ +EE+ SP SI +LS++A +E Q+DV A+L D+E ++Y+E PE + ++ L+K++YGL A W KF GF + ++PCV+ R +H VV+ + +YVDD+L+A ++ + L F +KDL +ASY LG I RDR L Q YI T++E+F + + IP +SLS+ D P+ D E + + PY VG+L++ TRLDI+FA + +F NPG HW A Q +YL RT+ L +TY G
Sbjct: 95 DPSTYSQAIKDFDSKKWISAMNEEFDSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSICAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKVVI-LTLYVDDILLAGNDVDMLDEVKQWLFKTFEMKDLGEASYILGIKIERDRVNRKLSLSQENYIDTLLEKFHMVDCLSGRIP-YNNLRSLSQKDCPKNDQETLDPKLYPYASAVGSLMYLMICTRLDIAFAVGMVSRFQSNPGKMHWMAIQWIFRYLKRTKGLKLTYHG 454
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 227 bits (579), Expect = 7.110e-63 Identity = 129/359 (35.93%), Postives = 204/359 (56.82%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEACRDSRKQIGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVTTTSIIPSAAGGKSLSKSDSPQTDAEVEEMRQI---PYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITY 1077
EP ++ +AQAS EWP+W++A+ + D G W++ + PK + +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P SIR +L++ WE Q+DV AYL D++ E+Y+ PE D +I L+K +YGL + W +K E G++ +ADPCV+ V +I V+VDDLL+ + + E+ RDL F + DL + +G I RDR AG ++ Q YI+++++++ + + + G L + + + E EE Y +VG+L++AA TR DIS+A L K+ P P HW AA++ L+YL TRDL ITY
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAV-----GMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPDISYAVQTLSKYTACPRPVHWTAAKRVLRYLAGTRDLHITY 1259
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 227 bits (579), Expect = 7.150e-63 Identity = 134/365 (36.71%), Postives = 208/365 (56.99%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEACRDSRKQ--IGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVF-RRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVT-----TTSIIPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITYG 1080
+P ++ +A S+EWP+WK AI ++M + G + +VE PK ++G++ VF+ K + +G IE YK RLVAQGF Q+ GI + E+ +P ASIR++L++ A WE Q+DV AYL D+E E+Y+ P + K+ + LK+ +YGL + + KK E + G S+ D CVF R ++++I + VDD +A TK R++ + F + DL + + LG + RDR+A TL Q YI ++ +F + TT + P G LS P T + E+M+ IPYRE +G+L++AA TR DI++A L +F NPG HW AA++ +YL TR+ +T+G
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIA-GTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDP----GTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFG 1280
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 220 bits (560), Expect = 8.870e-63 Identity = 137/363 (37.74%), Postives = 201/363 (55.37%), Query Frame = 1
Query: 10 EPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPEACRDSRKQIGL-LKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVT-----TTSIIPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITYG 1080
EP+T +A S QW+ A+ +M + G W +VE P + +G++ V++ K DG IE++K RLVA+GF Q G Y E+ + T Q ++R VL++ A R +D+ A++ +D++ E+Y+ PE R +I L K++YGL A LW +K GI I Q D V V++ V+VDD+ +A ++ ++ V L F ++DL SY LG ITR+R L Q QYI +E+FG+T TT + P+ LSKS SPQT EVEEM +IPY VG+L++ ATMTR DI++ A L +FN NPG HW+A + L+YL T D+ + YG
Sbjct: 103 EPVTYRQAITSPNAEQWQEAMIEEMTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGI-------YIYQNDN----------VKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNLI----LSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLKGTMDIKLEYG 444
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Match: A0A438II97_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438II97_VITVI) HSP 1 Score: 222 bits (565), Expect = 1.100e-62 Identity = 126/363 (34.71%), Postives = 208/363 (57.30%), Query Frame = 1
Query: 1 LDPEPITMGKAQASSEWPQWKRAITRKMDGQTARGVWQVVERPK*KTVLGTRVVFKRKIDKDGRIEKYKFRLVAQGFRQLKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEMYVELPE--ACRDSRKQIGLLKKAMYGLVHARLLW*KKFGIEFEAKGFQISQADPCVFRRILHGAVVVVIVVYVDDLLVACATKRDEEQAVRDLCSCFPIKDLEKASYYLGCHITRDRNAGTLKFDQHQYIQTVVEQFGVTTTSI--IPSAAGGKSLSKSDSPQTDAEVEEMRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALQYLWRTRDLGITY 1077
L+ +PI++ + + SS +W A+ +M GVW +VE PK +G + +FK K D G I +YK RLVA+GF Q +GI Y+E+ SP ++ S R++++++A E Q+DV +L + + +Y+ PE +DS++ + LK+++YGL A W +KF + GF+ + D C++ + G+ +++V+YVDD+L+A + + R L S F +KDL AS+ LG I RDR+ G L Q YI V+ +FG++ ++ P A G K S P+ + E + M + PY VG+L++A TR DI++ L ++ NPG HW+ A++ ++YL RT+D +TY
Sbjct: 186 LEDDPISVSQVKQSSNSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTTFLNGNTDETIYMVQPENFESKDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCALGDTPVAKGDK-FSLHQCPKNELEKKNMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTY 546 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114727.1172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig114727.1172.1 >prot_H-elongata_contig114727.1172.1 ID=prot_H-elongata_contig114727.1172.1|Name=mRNA_H-elongata_contig114727.1172.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp MRQIPYREIVGALIWAATMTRLDISFAAHQLVKFNDNPGPTHWRAAQQALback to top mRNA from alignment at H-elongata_contig114727:1010..2092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig114727.1172.1 ID=mRNA_H-elongata_contig114727.1172.1|Name=mRNA_H-elongata_contig114727.1172.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1083bp|location=Sequence derived from alignment at H-elongata_contig114727:1010..2092+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig114727:1010..2092+ >mRNA_H-elongata_contig114727.1172.1 ID=mRNA_H-elongata_contig114727.1172.1|Name=mRNA_H-elongata_contig114727.1172.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig114727:1010..2092+ (Himanthalia elongata Himel1 dioecious)back to top |