prot_H-elongata_contig114700.1168.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114700.1168.1
Unique Nameprot_H-elongata_contig114700.1168.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.540e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct:  225 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 260          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.700e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct: 1341 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1376          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.700e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct: 1321 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1356          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.700e-12
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ
Sbjct: 1290 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 1325          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 4.340e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQLLCLARAVLQR+QILVMDEATANIDQHTDSLIQ
Sbjct: 1240 QRQLLCLARAVLQRTQILVMDEATANIDQHTDSLIQ 1275          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: N6UP16_DENPD (ABC transporter domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UP16_DENPD)

HSP 1 Score: 59.3 bits (142), Expect = 6.390e-10
Identity = 27/36 (75.00%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQL+CLARA+++ ++IL+MDEATAN+DQHTDSLIQ
Sbjct:   34 QRQLICLARAIVRNNKILIMDEATANVDQHTDSLIQ 69          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: N6UIT0_DENPD (ABC transporter domain-containing protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UIT0_DENPD)

HSP 1 Score: 59.3 bits (142), Expect = 1.030e-9
Identity = 27/36 (75.00%), Postives = 36/36 (100.00%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            Q+QL+CLARA++++++ILVMDEATAN+DQHTDSLIQ
Sbjct:   64 QKQLICLARAIVRKNKILVMDEATANVDQHTDSLIQ 99          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: N6TSN4_DENPD (ABC transporter domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TSN4_DENPD)

HSP 1 Score: 59.3 bits (142), Expect = 1.190e-9
Identity = 27/36 (75.00%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQL+CLARA+++ ++IL+MDEATAN+DQHTDSLIQ
Sbjct:   74 QRQLICLARAIVRNNKILIMDEATANVDQHTDSLIQ 109          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: A0A6J2Y2S6_SITOR (multidrug resistance-associated protein 4-like isoform X1 n=2 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2Y2S6_SITOR)

HSP 1 Score: 59.7 bits (143), Expect = 2.250e-9
Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQL+CLARA+++ ++ILVMDEATAN+DQHTDSLIQ
Sbjct: 1233 QRQLICLARAIVRNNKILVMDEATANVDQHTDSLIQ 1268          
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Match: N6ULW0_DENPD (Uncharacterized protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6ULW0_DENPD)

HSP 1 Score: 59.7 bits (143), Expect = 2.260e-9
Identity = 28/36 (77.78%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQ 36
            QRQL+CLARA+++ ++ILVMDEATAN+DQHTDSLIQ
Sbjct:  547 QRQLICLARAIVRNNKILVMDEATANVDQHTDSLIQ 582          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114700.1168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW5_ECTSI1.540e-12100.00ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5JDN6_9PHAE1.700e-12100.00ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSW4_ECTSI1.700e-12100.00Multidrug resistance-associated protein-like prote... [more]
D8LSW3_ECTSI1.700e-12100.00Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDL0_9PHAE4.340e-1297.22ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
N6UP16_DENPD6.390e-1075.00ABC transporter domain-containing protein (Fragmen... [more]
N6UIT0_DENPD1.030e-975.00ABC transporter domain-containing protein (Fragmen... [more]
N6TSN4_DENPD1.190e-975.00ABC transporter domain-containing protein (Fragmen... [more]
A0A6J2Y2S6_SITOR2.250e-977.78multidrug resistance-associated protein 4-like iso... [more]
N6ULW0_DENPD2.260e-977.78Uncharacterized protein (Fragment) n=1 Tax=Dendroc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..37
e-value: 3.4E-10
score: 41.8
NoneNo IPR availablePANTHERPTHR24223:SF262coord: 1..36
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 1..36
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114700contigH-elongata_contig114700:1..111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114700.1168.1mRNA_H-elongata_contig114700.1168.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114700 1..111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114700.1168.1 ID=prot_H-elongata_contig114700.1168.1|Name=mRNA_H-elongata_contig114700.1168.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
QRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase