mRNA_H-elongata_contig11462.1164.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: A0A835YPZ9_9STRA (DMC1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ9_9STRA) HSP 1 Score: 374 bits (960), Expect = 3.490e-122 Identity = 191/329 (58.05%), Postives = 246/329 (74.77%), Query Frame = 2
Query: 107 YDDVDSFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITDTD 1093
Y+ V F +E+L I A+I KLKE +ATVG + P K TL IRGFSE V KI A KVD +F++G++ R R+ VIK+ TGS +D +LGGG+ETGSITEF+GEFR+GKTQ+MHTL VT+QL +SGG GRVV++DTE NFRPER+E IAERFG+D +E LENI + +HEQQ++ H + L +GPIR++IVDS+I LFR DFSGRG+L+ RQQKL +H++SL +A + N AVV++NQ M+DPGA++MFATVKPVGGHV+AHASTTR+ LKKGRG+ERIAK+ DSP MPEAE +F+I+ GGITD +
Sbjct: 22 YEVVVRFVEIEQLAKHAINAADIQKLKEQGIATVGMLFQCPLK---TLHDIRGFSETKVAKILETARKVDPRAGI-IFRSGIEARDERRNVIKITTGSAGLDGILGGGVETGSITEFYGEFRTGKTQMMHTLAVTAQLDIQSGGGAGRVVFIDTENNFRPERIENIAERFGIDGNEVLENIFHCQPQSHEQQMDFVHAVGPLATENGPIRLVIVDSIITLFRTDFSGRGELAERQQKLNKHMTSLKNIAREFNAAVVIINQVMADPGAISMFATVKPVGGHVVAHASTTRVMLKKGRGEERIAKICDSPLMPEAEATFRISDGGITDPE 346
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: A0A4D9CQI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQI8_9STRA) HSP 1 Score: 367 bits (941), Expect = 2.680e-119 Identity = 192/324 (59.26%), Postives = 244/324 (75.31%), Query Frame = 2
Query: 119 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFA-TVKPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITD 1087
D+ +V EL G+ A+I KL EA ++T G V P K LLAI+GFSEA V KI+++A K+ G+S F+TG + R R+R IK+ TG+K DA+LGGG+E+GSITE +GEFR+GKTQL HTL VT QL + GG +G+ +Y+DTEGNFRPER+E IA+RFGLD TL+NIIV R + +QQ E +AAL GP R++I+DS+IALFRVD+SGRG+LS RQQKLG+HLS+L ++A D+N+AV LVNQC +DPGAM++FA VKPVGG+VLAHAS TRIHLKKGR + R+AK+ DSPSMPEAE F IT GGI D
Sbjct: 28 DTMVNVSELQKLGVNAADIAKLVEAGISTAGMVCKVPLKV---LLAIKGFSEAKVEKIRSSARKLT-GGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIADRFGLDADATLDNIIVARAYASDQQCELLKPLAALIAEHGPFRMLIIDSIIALFRVDYSGRGELSERQQKLGQHLSALTRLAEDMNIAVFLVNQCTADPGAMSLFAPVVKPVGGNVLAHASCTRIHLKKGRENCRVAKVVDSPSMPEAEAQFAITDGGIAD 347
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: B6K203_SCHJY (RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K203_SCHJY) HSP 1 Score: 337 bits (865), Expect = 4.570e-108 Identity = 180/324 (55.56%), Postives = 234/324 (72.22%), Query Frame = 2
Query: 122 SFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITD 1087
SF +EELT GI M +I +LK+A + TV V + LL I+GFSEA V K++ AA+K+ + F T ++ +R+RV + TGSK DA+LGGG+++ SITE FGEFR GKTQ+ HTLCVT+QL RE GGAEG+V ++DTEG FRP+R+ IAERFG+D + +ENIIV+R +N EQQ++ +A + DG R++IVDS++ALFRVDFSGRG+LS RQQKL L+ L ++ + NVAV + NQ +DPGA MFA+ KPVGGHV+AHAS TRI L+KGRG+ER+AKL DSP MPEAECS+ ITSGGI D
Sbjct: 18 SFSDIEELTAQGIGMTDIIRLKQAGICTVQGV---QMSTKRFLLKIKGFSEAKVDKLKEAASKLCPAN----FATAMEISQSRKRVWSISTGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAERFGVDADQAMENIIVSRAYNSEQQMDYITKLATIFAEDGRYRLLIVDSIMALFRVDFSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAALMFASNDRKPVGGHVMAHASATRILLRKGRGEERVAKLNDSPDMPEAECSYVITSGGIAD 334
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: D7FY86_ECTSI (Meiotic recombination protein DMC1/LIM15 homolog, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY86_ECTSI) HSP 1 Score: 330 bits (846), Expect = 1.790e-106 Identity = 179/218 (82.11%), Postives = 194/218 (88.99%), Query Frame = 2
Query: 59 AAAQAVREASEQ-----KEDVYDDVDSFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAH 697
A+AQA R S Q ++ DDVDSFQ VEELTNAGIKMAEINKLKEANLATVG+VLATPTK LL IRGFS+A+V KIQ AAAKVD SGSSG+F+TGLQCR AR++VIKVHTGSKQ+DALLGGGIETGSITEFFGEFRSGKTQL HTLCVTSQLS+ESGGAEGRVVYMDTEGNFRPERVE IAERFGLDP+ETLEN+IVTRVFNHEQQI+RAH
Sbjct: 2 ASAQASRRNSNQXXXXXEDQEVDDVDSFQCVEELTNAGIKMAEINKLKEANLATVGAVLATPTKR---LLTIRGFSDATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAH 216
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: A0A1J4KIK7_9EUKA (Meiotic recombination protein DMC1 like protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KIK7_9EUKA) HSP 1 Score: 332 bits (852), Expect = 4.050e-106 Identity = 174/323 (53.87%), Postives = 232/323 (71.83%), Query Frame = 2
Query: 122 SFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITDT 1090
SF S+E+L AGI A+I KLKEA + TVG+VL K L ++G S+A V KI AAA +D S S F +G +C RQRVI + TGS ++D LLGGGIE+ SITE FGEFR+GKTQL HTLCVTSQL GG G+VVY+DTEG FRPER+ TIA RFG+DP+E L+NI+ R F HEQQ++ A D R++I+DS+ ALFRVDFSGRG+L+ RQQ LG+ +S+L ++A++ NVA+ + NQ M+ P + KP+GGH+LAHASTTR++L+KG+G ER+AK++DSPS+PEAE +++++ GI D+
Sbjct: 19 SFDSIEKLVQAGINAADIKKLKEAGICTVGAVLMETKKR---LANVKGISDAKVDKIIAAATSLDTSFS---FMSGNECLNRRQRVIHITTGSSELDKLLGGGIESMSITEVFGEFRTGKTQLCHTLCVTSQLPINQGGGAGKVVYIDTEGTFRPERIPTIAARFGVDPNEVLDNILYARAFTHEQQMQLILQATAQMAED-QYRLMIIDSITALFRVDFSGRGELAERQQTLGQMMSALSKVASEFNVAIFITNQVMASPDSALFVQAPKPIGGHILAHASTTRLYLRKGKGAERVAKIYDSPSLPEAEATYELSDTGIIDS 334
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: M3JBG1_CANMX (Meiotic recombination protein DLH1 n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3JBG1_CANMX) HSP 1 Score: 327 bits (837), Expect = 4.950e-104 Identity = 179/327 (54.74%), Postives = 226/327 (69.11%), Query Frame = 2
Query: 119 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITDT 1090
+S QSV+ L GI +INKLK A + ++ +VL+T + L I+G SE V KI+ AA K+ G F + R V + TGSKQ D +LGGGI++ SITE FGEFR GKTQL HTLCVT+QL ++ GG EGRV ++DTEG FRPER+ +IAERFG+DP LENI R N E QIE + + L++G R++IVDS++A FRVDFSGRG+L+ RQQKL +HLS+L ++A D NVAV L NQ SDPGA A+FA KPVGGHVLAHAS TRI L+KGRG+ER+AKL DSP+MPE EC + I+ GGI D+
Sbjct: 5 ESIQSVDLLQELGINAGDINKLKSAGIYSISTVLSTTRR---NLTKIKGLSEIKVEKIKEAAGKLKSVG----FISATSVAELRNNVFNITTGSKQFDEVLGGGIQSMSITEVFGEFRCGKTQLCHTLCVTAQLPKDMGGGEGRVAFIDTEGTFRPERIRSIAERFGVDPDTCLENISYARALNSEHQIELVEQLGSE-LSEGTFRLLIVDSIMACFRVDFSGRGELNERQQKLNQHLSNLTRVAEDYNVAVFLTNQVQSDPGASALFAGADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVISDGGIKDS 323
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: A0A5B0R9U5_PUCGR (Meiotic recombination protein dmc1 n=8 Tax=Puccinia TaxID=5296 RepID=A0A5B0R9U5_PUCGR) HSP 1 Score: 324 bits (831), Expect = 4.050e-103 Identity = 175/329 (53.19%), Postives = 232/329 (70.52%), Query Frame = 2
Query: 107 YDDVDSFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITD 1087
Y DVD+ Q + GI +I KLK+ AT+ +VL T + + L +++G SE V KI+ +A+K+ SG S F+TG + R++++ + TGSK +DA+LGGGI++ SITE +GEFR GKTQL HTLCVT+QL E GG G+ Y+DTEG FRPER+ TIA+RFG+DP L+NIIV R N E Q+E +AA DG R++IVDS++ALFRVDFSGRG+LS RQQKL + L+ L +++ + N+ + L NQ +DPGA +MFA KPVGGHVLAHA++TRI L+KGRGDER+AKL DSP MPE E S+KI +GGI D
Sbjct: 10 YTDVDALQEL------GISAQDIKKLKDGGFATIEAVL---TASRKQLTSLKGISEIKVEKIKDSASKL--SGPS--FKTGSDVLVDREKIVTLSTGSKAVDAMLGGGIQSQSITEVYGEFRCGKTQLCHTLCVTAQLPAEMGGGGGKAAYIDTEGTFRPERIRTIADRFGMDPEAVLDNIIVGRAANSEHQMELIVHLAAKFAEDGTFRLLIVDSIMALFRVDFSGRGELSERQQKLNQMLARLTRISEEFNLCIFLTNQVQADPGAASMFAGADKKPVGGHVLAHAASTRISLRKGRGDERVAKLCDSPDMPEGEASYKIATGGIED 325
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: DMC1_SCHPO (Meiotic recombination protein dmc1 n=3 Tax=Schizosaccharomyces TaxID=4895 RepID=DMC1_SCHPO) HSP 1 Score: 324 bits (831), Expect = 4.940e-103 Identity = 172/323 (53.25%), Postives = 231/323 (71.52%), Query Frame = 2
Query: 125 FQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITD 1087
F +E+LT GI M +I KLK+A + TV V + LL I+GFSEA V K++ AA+K+ + F T ++ R++V + TGS+ ++ +LGGGI++ SITE FGEFR GKTQ+ HTLCVT+QL R+ GGAEG+V ++DTEG FRP+R++ IAERFG+D + +ENIIV+R +N EQQ+E + + DG R++IVDS++ALFRVD+SGRG+LS RQQKL L+ L ++ + NVAV + NQ +DPGA MFA+ KPVGGHV+AHAS TR+ L+KGRG+ER+AKL DSP MPEAECS+ IT GGI D
Sbjct: 15 FSDIEDLTAHGIGMTDIIKLKQAGVCTVQGV---HMSTKRFLLKIKGFSEAKVDKLKEAASKMCPAN----FSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYVITPGGIAD 330
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: A0A196SJR0_BLAHN (Meiotic recombination protein DMC1/LIM15 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJR0_BLAHN) HSP 1 Score: 324 bits (830), Expect = 1.110e-102 Identity = 170/327 (51.99%), Postives = 234/327 (71.56%), Query Frame = 2
Query: 122 SFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTD-GPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFA--TVKPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITDTD 1093
+F VE++ GI ++I KLK+ T+G VL TP K L+ ++G SEA V KI A ++ ++GVF TG + RQ +IK+ TGS ++DAL+GGGIET SITE FGEFR+GKTQL HTLCVT+QL + GA G+V+++DTEG FRP+R+ IA R+GL+ E L+NI++ R + HEQQ++ AA + D P ++I+DS+ ALFRVD+SGRG+L+ RQQKLGRHLS+L ++A + NVAVV+VNQ +DPGA AMF + KP+GG+V+AHASTTR+ KKG+G++RI K++DSP +PE E +F I GIT+ D
Sbjct: 25 TFDPVEKMQQFGINASDIQKLKDGGYYTIGMVLKTPQK---DLVTVKGLSEAKVDKIIQVAKTIE---TTGVFCTGREVLSMRQAMIKMTTGSSELDALIGGGIETMSITEIFGEFRTGKTQLAHTLCVTAQLPLDMHGANGKVIFIDTEGTFRPQRIVEIAGRYGLNGDEVLDNILLARAYTHEQQMDIITAAAAKIVEDESPYHLLIIDSITALFRVDYSGRGELAERQQKLGRHLSALKKLAEEFNVAVVIVNQVTADPGAAAMFVKDSKKPIGGNVIAHASTTRLFFKKGKGEQRICKVYDSPDLPENEATFAIGPQGITNAD 345
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Match: A0A8J5USH7_9ASCO (AAA domain-containing protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5USH7_9ASCO) HSP 1 Score: 323 bits (827), Expect = 1.450e-102 Identity = 174/328 (53.05%), Postives = 227/328 (69.21%), Query Frame = 2
Query: 119 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLATPTKAPQTLLAIRGFSEASVTKIQAAAAKVDKSGSSGVFQTGLQCRIARQRVIKVHTGSKQMDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRESGGAEGRVVYMDTEGNFRPERVETIAERFGLDPSETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMAADLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRIHLKKGRGDERIAKLFDSPSMPEAECSFKITSGGITDTD 1093
+ QS++ L + GI +INKLK A + ++ SVL+T + ++ I+G SE V KI+ +A+K+ G F + R + + TGSKQ D +LGGGI++ S+TE FGEFR GKTQL HTLCVT+QL RE GG EGRV Y+DTEG FRPER+++IAERFG+DP L+NI R N E QIE + L+DG R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS L ++A D N+AV L NQ SDPGA ++FA KPVGGHVLAHAS TRI L+KGRG+ER+AKL DSP+MPE EC + I GGI D++
Sbjct: 4 EEVQSIDLLQDFGINAGDINKLKSAGIFSIASVLSTTRR---NMIKIKGLSEVKVDKIKESASKLKTVG----FVSATIVAELRTKTFNLSTGSKQFDEILGGGIQSMSLTEVFGEFRCGKTQLCHTLCVTAQLPREMGGGEGRVAYIDTEGTFRPERIKSIAERFGVDPEACLDNISYARALNSEHQIELVEQLGNQ-LSDGCFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSGLTRIAEDYNIAVFLTNQVQSDPGASSLFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVIGEGGIKDSE 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11462.1164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig11462.1164.1 >prot_H-elongata_contig11462.1164.1 ID=prot_H-elongata_contig11462.1164.1|Name=mRNA_H-elongata_contig11462.1164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp MAAAAQAVREASEQKEDVYDDVDSFQSVEELTNAGIKMAEINKLKEANLAback to top mRNA from alignment at H-elongata_contig11462:2916..7811- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig11462.1164.1 ID=mRNA_H-elongata_contig11462.1164.1|Name=mRNA_H-elongata_contig11462.1164.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4896bp|location=Sequence derived from alignment at H-elongata_contig11462:2916..7811- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig11462:2916..7811- >mRNA_H-elongata_contig11462.1164.1 ID=mRNA_H-elongata_contig11462.1164.1|Name=mRNA_H-elongata_contig11462.1164.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2088bp|location=Sequence derived from alignment at H-elongata_contig11462:2916..7811- (Himanthalia elongata Himel1 dioecious)back to top |