prot_H-elongata_contig114550.1158.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig114550.1158.1
Unique Name	prot_H-elongata_contig114550.1158.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	102

Homology

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: D8LBZ8_ECTSI (Protochlorophyllide reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBZ8_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.980e-33
Identity = 62/87 (71.26%), Postives = 71/87 (81.61%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYPK 96
            T   +GIG   AK LAASG+WHVI+AVRSFAK EA AK+ GMDP  YT+M+LDLASL+SVRNFV  +K A VKPDALVCNAAVW+PK
Sbjct:   95 TGASSGIGLEGAKFLAASGDWHVILAVRSFAKAEAGAKDLGMDPSTYTVMNLDLASLNSVRNFVAEIKAAKVKPDALVCNAAVWHPK 181

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A7S0Z1U2_9CRYP (Protochlorophyllide reductase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z1U2_9CRYP)

HSP 1 Score: 105 bits (262), Expect = 2.520e-24
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYPK 96
            T + +GIG  AA ELA+   WHVIMAVRS++K + +A++AG   D+YT+M +DLASL SVR+F  + K  G+ PDALVCNAAVWYP+
Sbjct:  107 TGSSSGIGLAAATELASKRGWHVIMAVRSYSKAQLAAQKAGFPEDSYTVMPVDLASLKSVRDFAASFKATGLTPDALVCNAAVWYPQ 193

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A6T8NUL2_HEMAN (Protochlorophyllide reductase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NUL2_HEMAN)

HSP 1 Score: 104 bits (260), Expect = 4.660e-24
Identity = 50/86 (58.14%), Postives = 65/86 (75.58%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYP 95
            T + +GIG  AA ELA    WHVIMAVRS++K + +A++AG+  D+YT+M +DLASL SVR+F  + K  G+ PDALVCNAAVWYP
Sbjct:   98 TGSSSGIGLAAATELACKRGWHVIMAVRSYSKAKLAAQKAGIPEDSYTVMSVDLASLQSVRDFAASFKATGLVPDALVCNAAVWYP 183

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: L1JNU2_GUITC (Protochlorophyllide reductase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNU2_GUITC)

HSP 1 Score: 103 bits (257), Expect = 1.240e-23
Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYPKVWAEK 101
            T   +GIG   AK ++A   WHVIMAVRS++K   +A+E GM+P  YTIM+LDLASLSSVR+FV  ++  G   DA+VCNAAVWYP+  A +
Sbjct:  100 TGASSGIGLQTAKAMSADKGWHVIMAVRSYSKAARAAEEIGMEPGTYTIMNLDLASLSSVRDFVNQLRLLGRPIDAIVCNAAVWYPRDTAPR 191

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A7S1TKW4_9RHOD (Protochlorophyllide reductase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKW4_9RHOD)

HSP 1 Score: 102 bits (253), Expect = 1.970e-23
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKT----AGVKPDALVCNAAVWYPK 96
            T + +G+G  AAKELAA+G+W V+MAVRSFAK E + +EA ++P+ Y +M LDLASL+SVR FV  +K+    A +  +ALVCNAAVWYPK
Sbjct:   76 TGSSSGLGLEAAKELAATGDWLVVMAVRSFAKAEKAMREANINPENYRVMSLDLASLTSVRQFVDELKSFLSRARLDLNALVCNAAVWYPK 166

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A836C128_9CHLO (NADPH-protochlorophyllide oxidoreductase n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C128_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 4.130e-23
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYP 95
            T   +G+G  AAK LAA+GEWHV+MA R F K E +AK+AGM P +Y+IM LDL+SL SVR FV   +++G + DALVCNAA++ P
Sbjct:   90 TGASSGLGLAAAKALAATGEWHVVMACRDFLKAEQAAKKAGMAPGSYSIMHLDLSSLESVRQFVNTFRSSGRRLDALVCNAAIYMP 175

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: POR_CHLRE (Protochlorophyllide reductase, chloroplastic n=4 Tax=Chlamydomonas TaxID=3052 RepID=POR_CHLRE)

HSP 1 Score: 100 bits (250), Expect = 4.250e-23
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYP 95
            T   +G+G NAAK LAA+GEWHV+MA R F K E +AK+ GM   +Y+I+ LDL+SL SVR FVQ  K +G + DALVCNAAV+ P
Sbjct:   91 TGASSGLGLNAAKALAATGEWHVVMACRDFLKAEQAAKKVGMPAGSYSILHLDLSSLESVRQFVQNFKASGRRLDALVCNAAVYLP 176

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A383V7Z2_TETOB (NADPH-protochlorophyllide oxidoreductase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V7Z2_TETOB)

HSP 1 Score: 100 bits (249), Expect = 5.510e-23
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYP 95
            T   +G+G NAA  LA +G+WHVIMA R F+K E +AK+ GM   +YT+M LDLASL+SVRNFV+  + +G + DALVCNAAV+ P
Sbjct:   89 TGASSGLGLNAAAALAKAGDWHVIMACRDFSKAEMAAKKMGMPAGSYTVMHLDLASLNSVRNFVENFRASGSRIDALVCNAAVYLP 174

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A2P6VKB3_9CHLO (NADPH-protochlorophyllide oxidoreductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKB3_9CHLO)

HSP 1 Score: 100 bits (248), Expect = 8.680e-23
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYP 95
            T   +G+G NAA  +A SG+WHV+MA R FAK E  A++ GM   +YT+M LDLASL SVR FVQ  K +G + DALVCNAAV+ P
Sbjct:   83 TGASSGLGLNAANSMAQSGDWHVVMACRDFAKAEKEARKLGMPKGSYTVMHLDLASLESVRQFVQNFKNSGRRLDALVCNAAVYLP 168

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BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Match: A0A812P828_9DINO (Protochlorophyllide reductase n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812P828_9DINO)

HSP 1 Score: 95.5 bits (236), Expect = 1.100e-22
Identity = 47/86 (54.65%), Postives = 65/86 (75.58%), Query Frame = 0

Query:   10 TRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAGMDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYP 95
            T   +G+G  AAKELAASG+W+VIMA R + K E +A++AGM  ++Y ++  DLAS +SVR+FV+A ++ G   DALVCNAAV+YP
Sbjct:   91 TGASSGLGLAAAKELAASGDWYVIMACRDYQKAEKAARDAGMLEESYEVLHCDLASTNSVRHFVKAFQSLGRPLDALVCNAAVYYP 176

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot

BLAST of mRNA_H-elongata_contig114550.1158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBZ8_ECTSI	2.980e-33	71.26	Protochlorophyllide reductase n=2 Tax=Ectocarpus T...	[more]
A0A7S0Z1U2_9CRYP	2.520e-24	57.47	Protochlorophyllide reductase n=1 Tax=Hemiselmis t...	[more]
A0A6T8NUL2_HEMAN	4.660e-24	58.14	Protochlorophyllide reductase n=1 Tax=Hemiselmis a...	[more]
L1JNU2_GUITC	1.240e-23	55.43	Protochlorophyllide reductase n=1 Tax=Guillardia t...	[more]
A0A7S1TKW4_9RHOD	1.970e-23	57.14	Protochlorophyllide reductase n=1 Tax=Erythrolobus...	[more]
A0A836C128_9CHLO	4.130e-23	56.98	NADPH-protochlorophyllide oxidoreductase n=2 Tax=E...	[more]
POR_CHLRE	4.250e-23	58.14	Protochlorophyllide reductase, chloroplastic n=4 T...	[more]
A0A383V7Z2_TETOB	5.510e-23	56.98	NADPH-protochlorophyllide oxidoreductase n=2 Tax=S...	[more]
A0A2P6VKB3_9CHLO	8.680e-23	56.98	NADPH-protochlorophyllide oxidoreductase n=1 Tax=M...	[more]
A0A812P828_9DINO	1.100e-22	54.65	Protochlorophyllide reductase n=1 Tax=Symbiodinium...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 12..101 e-value: 2.5E-16 score: 61.5
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 14..92 e-value: 1.7E-8 score: 34.1
IPR005979	Light-dependent protochlorophyllide reductase	PANTHER	PTHR44419	FAMILY NOT NAMED	coord: 13..96
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 14..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig114550	contig	H-elongata_contig114550:1284..1589 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig114550.1158.1	mRNA_H-elongata_contig114550.1158.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig114550 1284..1589 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig114550.1158.1 ID=prot_H-elongata_contig114550.1158.1|Name=mRNA_H-elongata_contig114550.1158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MSLPLTRRRTRTHTGIGFNAAKELAASGEWHVIMAVRSFAKTEASAKEAG
MDPDAYTIMDLDLASLSSVRNFVQAVKTAGVKPDALVCNAAVWYPKVWAE
K*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR005979	Prochl_reduct
IPR036291	NAD(P)-bd_dom_sf