mRNA_H-elongata_contig11430.1144.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11430.1144.1
Unique NamemRNA_H-elongata_contig11430.1144.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 5.250e-103
Identity = 172/201 (85.57%), Postives = 187/201 (93.03%), Query Frame = 3 
Query:  525 RVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
            R+YIAANSGARIGMAESLK+RF+V+WADP+DPTLGYRYLYL RED   MK RGAVVCEE+VDE S E R+KILDVIGEEPDLGVENLQGSGRIAGETS+AY DVFTLTLV+GR VGIGAYLVRLGQRT+QKASA+PILLTGYQALNTLMGREVYTSNEQLGG GVMGPNG+SH +VDSHIG ++SALRWLSYVP SRGSYL
Sbjct: 1653 RLYIAANSGARIGMAESLKKRFKVSWADPSDPTLGYRYLYLSREDYEDMKGRGAVVCEEVVDEDSGEVRFKILDVIGEEPDLGVENLQGSGRIAGETSSAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKASASPILLTGYQALNTLMGREVYTSNEQLGGTGVMGPNGISHQVVDSHIGAVTSALRWLSYVPSSRGSYL 1853
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.820e-83
Identity = 149/221 (67.42%), Postives = 176/221 (79.64%), Query Frame = 3 
Query:  468 VSIGKKRRVRSKNEP*T*IRVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGA-GVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
            V +   R  R+K  P    RVY+AANSGARIG+AE +K+RFRVAW D ADP LGYRYLYL  ED  A+  R AV C+ + DE + E R+++L++IG+EPDLGVENL+GSG IAGETSAAY DVFTLTLVVGR+VGIGAYLVRLGQRT+Q  +AAPILLTGYQALNTLMGREVY SN+QLGG   VM PNGV+HLL ++H+  +  ALRWLSYVP  +GSYL
Sbjct: 1637 VFLLASRYARAKGVP----RVYLAANSGARIGLAEGVKQRFRVAWQDDADPALGYRYLYLSDEDYAALSKRNAVHCKRMPDEQTGEERWRLLEIIGDEPDLGVENLRGSGAIAGETSAAYNDVFTLTLVVGRSVGIGAYLVRLGQRTIQNVTAAPILLTGYQALNTLMGREVYASNDQLGGGQSVMYPNGVAHLLAETHLESVRLALRWLSYVPAIKGSYL 1853
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A7S2V2G8_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G8_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.920e-73
Identity = 127/202 (62.87%), Postives = 165/202 (81.68%), Query Frame = 3 
Query:  525 RVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAG-VMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
            R+Y+AANSGARIGM+ S+K +F+V W +  DP+ G++YLYL+++D  A+  + AV+C+E      E  R  I D++G EPDLGVENL GSG IAGETS AY D+FTLTLVVGR+VGIGAYLVRLGQRT+QK + +PI+LTGYQALN LMGRE+Y SN+QLGGAG VMGPNGV+H++V++H+ V++S+L+WLSYVP  +G YL
Sbjct: 1718 RLYLAANSGARIGMSNSVKSKFKVCWLNEEDPSQGFKYLYLEKDDYEALAKKSAVICQE-----GEMDRMIITDIVGSEPDLGVENLSGSGLIAGETSKAYEDIFTLTLVVGRSVGIGAYLVRLGQRTIQKETESPIILTGYQALNKLMGRELYQSNDQLGGAGAVMGPNGVTHVVVENHMEVVTSSLKWLSYVPSVKGGYL 1914
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A482STZ8_9ARCH (Acetyl-CoA carboxylase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STZ8_9ARCH)

HSP 1 Score: 251 bits (641), Expect = 6.340e-71
Identity = 127/208 (61.06%), Postives = 159/208 (76.44%), Query Frame = 3 
Query:  525 RVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRE--D*VAMKARG-----AVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
            R+++AANSGARIGMA+SLK +F++ W+D  DP  G++Y+YL ++  D + +KA G      V+C  + D+   E RYKI D+IGEEPDLGVENL GSG IAGET+ AY ++FTLTLVVGR VGIGAYLVRLGQRT+QK   API+LTGYQALN LMGRE+YT+N+QLGG  +M PNGVSH L D+H   +  A+ WLS+VP SRG  L
Sbjct: 1585 RIFLAANSGARIGMAQSLKNKFKICWSDAKDPAKGFKYIYLTKDSYDQLVLKANGDLAALPVLCSNVEDDG--EIRYKIDDIIGEEPDLGVENLMGSGLIAGETARAYNEIFTLTLVVGRTVGIGAYLVRLGQRTIQKTRHAPIILTGYQALNKLMGREIYTTNDQLGGPMIMFPNGVSHQLADTHYDAVVKAVEWLSFVPSSRGGPL 1790
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A7S4MUC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MUC6_9STRA)

HSP 1 Score: 241 bits (614), Expect = 4.240e-70
Identity = 129/232 (55.60%), Postives = 165/232 (71.12%), Query Frame = 3 
Query:  459 HKHVSIGKKRRV---------RSKNEP*T*IRVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
            HK  S G +  V         RSK  P    R+Y+AANSGARIG+AE +K+ +RVA+ D + P  G+ YLY+  ED    + +  +  E++  E   +T YK+ DVIG EPDLGVENL+GSG IAGETS+AY D+FTLT+V+GR VGIGAYLVRLGQRT+QK +A+PI+LTGYQALN LMG +VYT+N+QLGG G+M  NGVSH+    H+G ++SA+ WLSYVP  RG  L
Sbjct:   53 HKAGSFGTREDVVFKMASEFARSKRIP----RLYVAANSGARIGLAEGVKKAYRVAFKDKSKPENGFEYLYVTEEDYERFQEKHELDAEKV--ELDGKTVYKLTDVIGSEPDLGVENLKGSGLIAGETSSAYNDIFTLTVVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGCDVYTTNDQLGGPGIMYSNGVSHISSPDHLGAVASAVDWLSYVPSKRGGLL 278
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A7S0C3E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3E3_9STRA)

HSP 1 Score: 233 bits (594), Expect = 2.260e-69
Identity = 122/217 (56.22%), Postives = 157/217 (72.35%), Query Frame = 3 
Query:  492 VRSKNEP*T*IRVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVD-----EASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
             R K  P    R+Y+AANSGARIG AE +K+ F+VA+ DP+ P  G+++LY+ ++D V +      +  E V          E  YKI DVIG EPDLGVENL+GSG IAGETS+AY D+FT+T+V+GR VGIGAYLVRLGQRT+QK +++PI+LTGYQALN LMG EVY++N+QLGG G+M  NGV+HL+   H+  I+ AL+WLSYVP  RG  L
Sbjct:   85 AREKRAP----RLYVAANSGARIGTAEKVKKAFKVAFKDPSKPENGFKFLYVTKDDYVRLVQSSKEILTEPVQFENPITGKMEEVYKITDVIGSEPDLGVENLKGSGLIAGETSSAYEDIFTMTIVLGRTVGIGAYLVRLGQRTIQKKTSSPIILTGYQALNKLMGCEVYSTNDQLGGPGIMYNNGVTHLVAPDHLSCITEALQWLSYVPSIRGGLL 297
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A7S2LR84_9STRA (Acetyl-CoA carboxylase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LR84_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.190e-68
Identity = 123/212 (58.02%), Postives = 159/212 (75.00%), Query Frame = 3 
Query:  492 VRSKNEP*T*IRVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
             R+K  P    R+Y+AANSGARIG AE +K+ F+VA+ DP+ P  G++YLY+D E    +   G +  E  VDE+   T YK+ D+IG EPDLGVENL+GSG IAGETS+AY D+FT+T+V+GR VGIGAYLVRLGQRT+QK S++PI+LTGYQALN LMG EVY++N+QLGG G+M  NG+SHL+   H+  ++ A+ WLSYVP  RG  L
Sbjct: 1689 ARAKRVP----RLYVAANSGARIGTAEGVKKSFKVAFKDPSKPESGFQYLYVDEETYQRLGPNGDINAEPTVDESGN-TVYKLTDIIGAEPDLGVENLKGSGLIAGETSSAYNDIFTMTIVMGRTVGIGAYLVRLGQRTIQKTSSSPIILTGYQALNKLMGVEVYSTNDQLGGPGIMYTNGISHLVAPDHLVAVTQAVEWLSYVPSIRGGLL 1895
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: D8LHP3_ECTSI (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP3_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 5.480e-68
Identity = 122/143 (85.31%), Postives = 133/143 (93.01%), Query Frame = 3 
Query:  525 RVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQ 953
            R+YIAANSGARIGMAESLK+RF+V+WADP+DPTLGYRYLYL RED   MK RGAVVCEE+VDE S E R+KILDVIGEEPDLGVENLQGSGRIAGETS+AY DVFTLTLV+GR VGIGAYLVRLGQRT+QKASA+PILLTGYQ
Sbjct: 1691 RLYIAANSGARIGMAESLKKRFKVSWADPSDPTLGYRYLYLSREDYEDMKGRGAVVCEEVVDEDSGEVRFKILDVIGEEPDLGVENLQGSGRIAGETSSAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKASASPILLTGYQ 1833
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A6G0X0G6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0G6_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.670e-68
Identity = 124/201 (61.69%), Postives = 157/201 (78.11%), Query Frame = 3 
Query:  525 RVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRGSYL 1127
            R+Y AANSGARIGMAE++K +++VAW D +DP+ G+ YLYL + D    ++ GA+ C E +  A  ETRY I D+IGEE DLGVENL+GSG IAGE+S AY D+FTLT V GR+VGIGAYLVRLGQRTVQ  + API+LTGYQALN LMG+EVY+SN+QLGG  +M  NGV+HL  ++H+  I+S L WLS+VP +RG+ L
Sbjct: 1640 RLYFAANSGARIGMAETVKAKYQVAWKDASDPSKGFEYLYLSKADYDYFRSVGAIECAEKIT-AEGETRYVITDIIGEERDLGVENLRGSGTIAGESSRAYSDIFTLTYVCGRSVGIGAYLVRLGQRTVQNVTNAPIILTGYQALNKLMGKEVYSSNDQLGGIKIMHNNGVTHLTSNNHLHGIASILNWLSFVPATRGAAL 1839
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BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Match: A0A7R9U8E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8E4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.950e-68
Identity = 121/197 (61.42%), Postives = 151/197 (76.65%), Query Frame = 3 
Query:  525 RVYIAANSGARIGMAESLKERFRVAWADPADPTLGYRYLYLDRED*VAMKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETSAAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSR 1115
            R+Y+AANSGARIGMAES++++F++AW    DPT G+RYLYL   D  A + R AV  E ++++   E R++I D+IGEE DLGVENL GSGRIAGETS AY ++FTLTLVVGR VGIGAYLVRLGQRT+Q    API+LTGYQALN LMG+ +YTSN+QLGG  +M PNGV+HLL  +H   +  A+ WL +VP  R
Sbjct:  474 RLYLAANSGARIGMAESIQKKFKIAWTKEGDPTSGFRYLYLAPADYEAARQRSAVKAELMLEDG--EVRFRITDIIGEERDLGVENLMGSGRIAGETSRAYNEIFTLTLVVGRTVGIGAYLVRLGQRTIQSKGDAPIILTGYQALNKLMGKAIYTSNDQLGGPSIMHPNGVTHLLAANHKEAVVKAVEWLGFVPTIR 668
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11430.1144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K608_9PHAE5.250e-10385.57Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A835YMY6_9STRA1.820e-8367.42Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2V2G8_9STRA1.920e-7362.87Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica... [more]
A0A482STZ8_9ARCH6.340e-7161.06Acetyl-CoA carboxylase (Fragment) n=1 Tax=archaeon... [more]
A0A7S4MUC6_9STRA4.240e-7055.60Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S0C3E3_9STRA2.260e-6956.22Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2LR84_9STRA4.190e-6858.02Acetyl-CoA carboxylase n=2 Tax=Leptocylindrus dani... [more]
D8LHP3_ECTSI5.480e-6885.31Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculo... [more]
A0A6G0X0G6_9STRA5.670e-6861.69Acetyl-CoA carboxylase n=1 Tax=Aphanomyces euteich... [more]
A0A7R9U8E4_9STRA5.950e-6861.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11430contigH-elongata_contig11430:2027..4486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.0
Seed ortholog evalue3.4e-45
Seed eggNOG ortholog159749.K0R0D3
Preferred nameACACB
KEGG rclassRC00040,RC00253,RC00367
KEGG koko:K01946,ko:K11262
KEGG ReactionR00742,R04385,R04386
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04920,ko04922,ko04931,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04920,map04922,map04931
KEGG ModuleM00082
GOsGO:0000166,GO:0000902,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001101,GO:0001650,GO:0001676,GO:0001894,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003989,GO:0004075,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006084,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006163,GO:0006164,GO:0006355,GO:0006606,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006853,GO:0006869,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006998,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009374,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010256,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0010876,GO:0010883,GO:0010884,GO:0010906,GO:0012505,GO:0014070,GO:0015031,GO:0015629,GO:0015711,GO:0015718,GO:0015833,GO:0015849,GO:0015908,GO:0015909,GO:0015980,GO:0016020,GO:0016043,GO:0016053,GO:0016421,GO:0016874,GO:0016879,GO:0016885,GO:0017038,GO:0017076,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019432,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0019867,GO:0019899,GO:0019900,GO:0019904,GO:0022607,GO:0030554,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031406,GO:0031667,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031998,GO:0031999,GO:0032365,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032810,GO:0032870,GO:0032879,GO:0032989,GO:0033036,GO:0033218,GO:0033293,GO:0033365,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034285,GO:0034504,GO:0034613,GO:0034641,GO:0034654,GO:0034694,GO:0034695,GO:0035257,GO:0035337,GO:0035383,GO:0035384,GO:0035639,GO:0036094,GO:0040008,GO:0040029,GO:0042175,GO:0042221,GO:0042493,GO:0042592,GO:0042759,GO:0042802,GO:0042886,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044042,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045017,GO:0045184,GO:0045540,GO:0045833,GO:0045893,GO:0045922,GO:0045927,GO:0045935,GO:0046320,GO:0046322,GO:0046390,GO:0046394,GO:0046460,GO:0046463,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046890,GO:0046907,GO:0046942,GO:0046949,GO:0046966,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050662,GO:0050692,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051427,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0055086,GO:0055088,GO:0055114,GO:0060249,GO:0060255,GO:0060420,GO:0060421,GO:0061024,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071324,GO:0071329,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071495,GO:0071616,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072594,GO:0080090,GO:0090181,GO:0090407,GO:0097009,GO:0097066,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0098588,GO:0098656,GO:0098805,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901654,GO:1901655,GO:1901681,GO:1901700,GO:1901701,GO:1902001,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1903825,GO:1905039,GO:1905952,GO:1905954,GO:1990542,GO:1990837,GO:2000026,GO:2000112,GO:2001141,GO:2001293,GO:2001295
EggNOG free text desc.acetyl-CoA carboxylase
EggNOG OGs2XAV2@2836,COG0439@1,KOG0368@2759
EC2.1.3.15,6.3.4.14,6.4.1.2
COG Functional cat.I
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size1127
Cds size459
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11430.1144.1prot_H-elongata_contig11430.1144.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11430 3190..4486 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929660.3681352-UTR-H-elongata_contig11430:2026..26601622929660.3681352-UTR-H-elongata_contig11430:2026..2660Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11430 2027..2660 +
1691679109.5624297-UTR-H-elongata_contig11430:2026..26601691679109.5624297-UTR-H-elongata_contig11430:2026..2660Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11430 2027..2660 +
1622929660.3930502-UTR-H-elongata_contig11430:3155..31891622929660.3930502-UTR-H-elongata_contig11430:3155..3189Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11430 3156..3189 +
1691679109.5759332-UTR-H-elongata_contig11430:3155..31891691679109.5759332-UTR-H-elongata_contig11430:3155..3189Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11430 3156..3189 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929660.4075525-CDS-H-elongata_contig11430:3189..32641622929660.4075525-CDS-H-elongata_contig11430:3189..3264Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11430 3190..3264 +
1691679109.5848577-CDS-H-elongata_contig11430:3189..32641691679109.5848577-CDS-H-elongata_contig11430:3189..3264Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11430 3190..3264 +
1622929660.4260352-CDS-H-elongata_contig11430:3812..40221622929660.4260352-CDS-H-elongata_contig11430:3812..4022Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11430 3813..4022 +
1691679109.6047478-CDS-H-elongata_contig11430:3812..40221691679109.6047478-CDS-H-elongata_contig11430:3812..4022Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11430 3813..4022 +
1622929660.4503272-CDS-H-elongata_contig11430:4312..44861622929660.4503272-CDS-H-elongata_contig11430:4312..4486Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11430 4313..4486 +
1691679109.614373-CDS-H-elongata_contig11430:4312..44861691679109.614373-CDS-H-elongata_contig11430:4312..4486Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11430 4313..4486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11430.1144.1

>prot_H-elongata_contig11430.1144.1 ID=prot_H-elongata_contig11430.1144.1|Name=mRNA_H-elongata_contig11430.1144.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
MKARGAVVCEEIVDEASEETRYKILDVIGEEPDLGVENLQGSGRIAGETS
AAYGDVFTLTLVVGRAVGIGAYLVRLGQRTVQKASAAPILLTGYQALNTL
MGREVYTSNEQLGGAGVMGPNGVSHLLVDSHIGVISSALRWLSYVPRSRG
SYL
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mRNA from alignment at H-elongata_contig11430:2027..4486+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11430.1144.1 ID=mRNA_H-elongata_contig11430.1144.1|Name=mRNA_H-elongata_contig11430.1144.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2460bp|location=Sequence derived from alignment at H-elongata_contig11430:2027..4486+ (Himanthalia elongata Himel1 dioecious)
CCTGAATAGGCAGCACCCGTTAGGCAAGCTATCTTACGTATTGCGGGCTC
AATGTCGACAGACTCTCGGTGGCAAACGCAATCGGTACGCATTTGCGTGA
CCTGATGACATCGGGATTGCTCGATGGCGGTTGACGGTAGAGATGGACGG
TAGAGATGGACGACGTCGCGGAAAGTGAGAGGATCCCGAGAGTACGCACC
AGATTCAGCCTGGGTTAGGAGAATGAGCAGGCTGACGCGGTACGGGACTG
CTGAACCCGTCTCGCGAAATCAAATTCTCAGGCGCGAACAGGGGCAGGGA
AGATTAATTTTCTCTGTTCAGCTGACGACAAGCAGGAGGCAACCAAATCC
GGTTGATCCTTACTCTGCTATATACGATGACGACGTCATTCACCCGGTTG
ATCCTTACTCTGCTATATGCGATGATGACGTCACTCACAGCACACATAAA
AACACTTGCACAAACACGTAAGTATTGGAAAGAAACGTCGCGTCCGATCG
AAAAATGAACCATGAACATGAATCAGGGTCTACATCGCGGCGAACTCTGG
AGCGAGGATCGGGATGGCGGAGAGCCTCAAGGAGCGCTTCAGGGTCGCTT
GGGCGGATCCCGCTGACCCCACTCTCGGATATAGGTAGTCTAGACGATCA
GTAGCATCTGCATAGTGTATAGTGCACGGTGGCCATATTTGACCGTCTAC
CACCTGTATTACCTCCGCGGTGGCCGTCACTAGGCATAGTTCCTTACTGT
GTATTACCTCCGCGGTGCGTTTTTTTGGGGGGGTTGTGATTTATCGAAGG
CGGTTCTTTTGTCCATATTTTTCTCTTTTCGGCATTTTTAATCATGTAGC
TTTGGGTGTGTTATATTGTTCTATATTGTACTATATATTGTATTATAGAG
TGCTATGCCTACCGTACTATTTTGGGCTATATTGTACTAATACCTATTTT
AGTGTAATGTACACCGCTTGTGGAAGTAAGTCGTCTCTAAAGGCACAGGC
TTAGGGTCACACTTGTTCGCGGCAGTGCTTTTACGTCCCTCTTACGTCCC
TCGAATGACCTTTCGTGTACGTACGTGCGTCCATGTGCGTGTATGTTATT
GCGGTATTGTGATGATACTCCTGCGGCAGGTATCTGTACCTCGACCGTGA
GGACTAAGTTGCGATGAAGGCCAGGGGTGCTGTGGTGTGCGAGGAGATCG
TTGACGAAGCTTCGGAAGAGACGCGGTACAAGATCCTCGTGAGTACTATT
GTGGTGGTACTATTGTGGTACGGTACTATTGTGGTAATATATTCCATCCA
GTTGCTTCCTTGCTGCACCTGTACAAGGGTCGTCGATCTGTCCTATCCTG
CCCTGCTTTGCTCTACCGTGTACATTAGAGCTATCTATTACCCTTATAAT
ATTAGTATTAATTTCAGGGATGGATTCGCTCTCTTCAAGGCTACCGTACC
GTAGTGGTTCGAATACTCTATACTCTATATTCTACACCTCTCTATACTAT
ACTCTATACTCGATAAACATTTTTTATGTAACGCGGGGGCAAGTGATTCT
GTCTAGAAGGATTTCTTAAAGAGTTGTTCCCAAAGACTTGTATTTTTATT
CATAAAAGAGTTTTTAGTAATACCATCGTACCATCTCGACGGTATCAACG
GTACAAACGGTACAGACCGTTTTCGTAGCAGGAGGACCACGGGACCAGCC
AGGAGAGGAAACGAAAAGCTTAACCCACTGACCTACCCACCTGTAGTCAT
GTGAGTTGCGCGAAACGTGATGACGTGATGACGCAGGACGTGATCGGTGA
AGAGCCCGACCTTGGAGTGGAAAACCTTCAGGGGAGCGGCCGCATCGCTG
GCGAGACGTCGGCGGCCTATGGCGATGTCTTCACGCTCACCCTCGTGGTG
GGCAGGGCTGTGGGTATTGGCGCCTACCTCGTCCGCCTGGGGCAAAGGAC
AGTCCAGAAGGCTTCCGCCGCCCCCATCTTGCTGACAGGATATCAGGTTT
GTTATGCGATTAAGTTTGTTTTGTGTTAATATTATTTTACTGGTTTGATT
CGAAAAAGTCGAGGCGTTGTTCAACCATTGAGCAATATCTTTGAAAATCG
TGGCAAGCAACTGCATTTGTTGTTGTAGTGGTACAGTATTTTTTATCATT
GTAGAAATATTTCCCGTGTCATCTTCGTCGTCTGGAGGACGATCAGCTGG
CGAGTGATGTATTAGTTTTTCGTTACGGTGGCTCGAACGAACGCTGCGCC
TGTTCCCTCCCTCCCTCCCTCATGGCCTCATGGAAGGCGTTGAACACCCT
CATGGGCCGCGAGGTGTACACGTCGAACGAGCAGCTGGGAGGTGCCGGAG
TCATGGGCCCTAACGGGGTTTCTCATCTGCTAGTGGATTCCCACATCGGG
GTCATTTCCTCGGCGCTTCGCTGGCTTAGCTACGTGCCGAGAAGCCGGGG
ATCGTACCTT
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Coding sequence (CDS) from alignment at H-elongata_contig11430:2027..4486+

>mRNA_H-elongata_contig11430.1144.1 ID=mRNA_H-elongata_contig11430.1144.1|Name=mRNA_H-elongata_contig11430.1144.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig11430:2027..4486+ (Himanthalia elongata Himel1 dioecious)
ATGAAGGCCAGGGGTGCTGTGGTGTGCGAGGAGATCGTTGACGAAGCTTC
GGAAGAGACGCGGTACAAGATCCTCATGAAGGCCAGGGGTGCTGTGGTGT
GCGAGGAGATCGTTGACGAAGCTTCGGAAGAGACGCGGTACAAGATCCTC
GACGTGATCGGTGAAGAGCCCGACCTTGGAGTGGAAAACCTTCAGGGGAG
CGGCCGCATCGCTGGCGAGACGTCGGCGGCCTATGGCGATGTCTTCACGC
TCACCCTCGTGGTGGGCAGGGCTGTGGGTATTGGCGCCTACCTCGTCCGC
CTGGGGCAAAGGACAGTCCAGAAGGCTTCCGCCGCCCCCATCTTGCTGAC
AGGATATCAGGACGTGATCGGTGAAGAGCCCGACCTTGGAGTGGAAAACC
TTCAGGGGAGCGGCCGCATCGCTGGCGAGACGTCGGCGGCCTATGGCGAT
GTCTTCACGCTCACCCTCGTGGTGGGCAGGGCTGTGGGTATTGGCGCCTA
CCTCGTCCGCCTGGGGCAAAGGACAGTCCAGAAGGCTTCCGCCGCCCCCA
TCTTGCTGACAGGATATCAGGCGTTGAACACCCTCATGGGCCGCGAGGTG
TACACGTCGAACGAGCAGCTGGGAGGTGCCGGAGTCATGGGCCCTAACGG
GGTTTCTCATCTGCTAGTGGATTCCCACATCGGGGTCATTTCCTCGGCGC
TTCGCTGGCTTAGCTACGTGCCGAGAAGCCGGGGATCGTACCTTGCGTTG
AACACCCTCATGGGCCGCGAGGTGTACACGTCGAACGAGCAGCTGGGAGG
TGCCGGAGTCATGGGCCCTAACGGGGTTTCTCATCTGCTAGTGGATTCCC
ACATCGGGGTCATTTCCTCGGCGCTTCGCTGGCTTAGCTACGTGCCGAGA
AGCCGGGGATCGTACCTT
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