prot_H-elongata_contig114282.1140.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114282.1140.1
Unique Nameprot_H-elongata_contig114282.1140.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A6H5L219_9PHAE (Holocytochrome c-type synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L219_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 7.810e-64
Identity = 116/208 (55.77%), Postives = 137/208 (65.87%), Query Frame = 0
Query:   30 SGCPVQHDSVTNTPSG---------GGLAAMLTGGSDAGQRAEDAAGRESDPA-YNALNNEYVYGQEEYPGQEMPLSTRRQKSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGE---------GAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            SGCPV+H S   + +          G L   + G   +G+ +   A   + P  YNA NNEYVYGQE   GQE+PLST RQ+SSIPKA++NP HQP++E + WVYPSEQQYYNAIKRKGY ASA DMPSTLAIHNAVNEKGWEMV+EWE+ R                   G     +L+RFTGRPQD SPKAW+ + LLGYRPPFDR
Sbjct:  123 SGCPVEHGSAATSTAAPAEGLGRVWGYLTGSIGGAGGSGEVSSATAPAPAAPELYNARNNEYVYGQEVAAGQEVPLSTSRQRSSIPKAEFNPDHQPQKEAEKWVYPSEQQYYNAIKRKGYKASAADMPSTLAIHNAVNEKGWEMVQEWERARXXXXXXXXXXXXXXXXXXXGVPAAPKLLRFTGRPQDTSPKAWVKSTLLGYRPPFDR 330          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: D8LGP6_ECTSI (Holocytochrome c-type synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP6_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.000e-58
Identity = 122/244 (50.00%), Postives = 138/244 (56.56%), Query Frame = 0
Query:   31 GCPVQHDSV---TNTPSGG-----GLAAMLTGGSDAGQRAEDAAGR--ESDPAYNALNNEYVYGQEEYPGQEMPLSTRRQKSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAA-----------------------DGKGSGEG-----------------------AVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            GCPVQH S    T  P+GG     G      GG+              E+   YNA NNEYVYGQE   GQE+PLST RQ+SSIPKA++NP HQP++E + WVYPSEQQYYNAIKRKGY ASA DMPSTLAIHNAVNEKGWEMV+EWE+  A A                       +G   GEG                        V   +L RFTGRPQD SPKAW+ + L GYRPPFDR
Sbjct:  110 GCPVQHGSAATSTAAPAGGLGRVWGYLTGSIGGAXXXXXXXXXXXXXXEAPELYNARNNEYVYGQEVAAGQEVPLSTSRQRSSIPKAEFNPDHQPQKEAEKWVYPSEQQYYNAIKRKGYKASAADMPSTLAIHNAVNEKGWEMVQEWERAHAEAAXXXXXXXXXXXXXXXXXXXXXXEGFRGGEGLHPGAPQIGTPPXXXXXXXXXXVGVPAPKLFRFTGRPQDTSPKAWVKSTLFGYRPPFDR 353          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A835ZPE3_9STRA (Holocytochrome c-type synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPE3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.850e-38
Identity = 71/128 (55.47%), Postives = 84/128 (65.62%), Query Frame = 0
Query:   91 QEMPLSTRRQKSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            Q +PLST RQ S+IPK +  P HQP E    WVYPSEQQY+NA+KRKG+ A   D+P  LAIHNAVNE+GW  V+EWE  R              D +L  F GRP D+SPKAW  T +LGY+PPFDR
Sbjct:   19 QTVPLSTARQCSTIPKGEVTPQHQP-EGANVWVYPSEQQYFNAMKRKGWEAQEQDVPIVLAIHNAVNEQGWSKVREWEAMRGG------------DPKLKEFRGRPNDISPKAWFKTNVLGYKPPFDR 133          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: W7TBT6_9STRA (Holocytochrome c-type synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBT6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.500e-37
Identity = 82/156 (52.56%), Postives = 98/156 (62.82%), Query Frame = 0
Query:   67 GRESDPA---YNALNNEYVYGQEEYPGQEMPLSTRRQKSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKA-WINTYLLGYRPPFDR 218
            GR S P+    N LNNE  Y Q   P Q +PLST R+ SSIPK+D+ P HQPK  G  WVYPSEQQY+NA+K KG++    D+   LAIHNAVNE+GW  V EWE       G GS        +L RF GRPQD+SPKA W+  ++ GY  PFDR
Sbjct:   69 GRASPPSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWE------GGLGS-----TPPKLKRFMGRPQDLSPKAAWL--WMCGYNKPFDR 211          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A7S1UN93_9STRA (Holocytochrome c-type synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN93_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.290e-35
Identity = 74/141 (52.48%), Postives = 93/141 (65.96%), Query Frame = 0
Query:   83 YGQEEYPGQEMPLSTRRQKSSIPKADYN-----PSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            + Q  +P Q +PLST+R  SSIP+   +     PSHQP      WVYPSEQQ+YNA+KRKG+ A  + MP  + IHNAVNE+GW  V +WE    A  G         + RLVRF GRP+D+SPKA++NTY+LGYRPPFDR
Sbjct:   70 HAQTPHPDQRIPLSTQRSISSIPRESSSNETPPPSHQPTS-SHNWVYPSEQQFYNAMKRKGWEADESTMPLVVRIHNAVNERGWSEVCKWE----ALHG-------CPNPRLVRFLGRPKDISPKAFLNTYILGYRPPFDR 198          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A7S3HNG9_9STRA (Holocytochrome c-type synthase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNG9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 9.330e-35
Identity = 74/153 (48.37%), Postives = 94/153 (61.44%), Query Frame = 0
Query:   66 AGRESDPAYNALNNEYVYGQEEYPGQEMPLSTRRQKSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            A   ++P YN   N++V+ Q     Q+  LS +R  S+IPK D+ P HQPK   K WVYPSEQQYYNA+KRKGYN S  D+P+ L IHN VNEKGW  VKEWE    A  G         + +L +F G+P  +SPKA +   ++GY  PFDR
Sbjct:   54 AASSNNPLYNTNANDFVFDQSRTADQKANLSVKRATSTIPKGDFTPEHQPKATEK-WVYPSEQQYYNAMKRKGYNPSEADIPAVLFIHNHVNEKGWSQVKEWE----AYSG-------FPNPKLKKFMGKPTQLSPKARLLN-MIGYSKPFDR 193          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A6S9GRE1_HETAK (Holocytochrome c-type synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GRE1_HETAK)

HSP 1 Score: 128 bits (321), Expect = 4.630e-32
Identity = 87/199 (43.72%), Postives = 110/199 (55.28%), Query Frame = 0
Query:   22 VSSVESLSSGCPVQHDSVTNT--PSGGGLAAMLTGGSDAGQRAEDAAGRESDPAYNALNNEYVYGQEEYPGQEMPLSTRRQKSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            +S+ E   S CP+ +    N   P+G  L  ML GG    +  + AA  + DP     N E  + Q   PGQ  PLSTRR  SSIPK D  P HQ KE  + WVYPSEQ YYNA+KRKG++    DMP+ +AIHN VNE+GW  V +WE   +  +            RL+RF G    +SP+A +N  LLGY  PFDR
Sbjct:   21 ISASEEPPSECPINNAKDFNPQHPNGLPLPKMLQGGCPRDE--QGAANADVDPG----NREVRHSQARAPGQTKPLSTRRLVSSIPKGDETPHHQ-KETNRKWVYPSEQMYYNAMKRKGWDPREEDMPAVVAIHNFVNEEGWRRVCKWEAMHSNHE-----------PRLIRFQGDATKLSPRARLNG-LLGYSLPFDR 200          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A7S4DXX3_9EUKA (Holocytochrome c-type synthase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXX3_9EUKA)

HSP 1 Score: 124 bits (312), Expect = 4.900e-32
Identity = 70/130 (53.85%), Postives = 82/130 (63.08%), Query Frame = 0
Query:   90 GQEMPLSTRRQKSSIPKADYNPSHQPKEEGKT-WVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            GQ MPL T R +S+IPK D+ PSHQ   EGK  W YPS QQ+YNA+KRKGY     DM S +AIHN VNEK W+ V EWEK                + RL +F+GR  D S KA INT+ +GYRPPFDR
Sbjct:   31 GQRMPLPTHRVESTIPKGDFKPSHQL--EGKANWTYPSPQQFYNAMKRKGYQPKEEDMQSVVAIHNTVNEKTWKKVMEWEKMHL---------DKCPNPRLEKFSGRANDQSLKARINTW-MGYRPPFDR 148          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: A0A7S0WA24_9CRYP (Holocytochrome c-type synthase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WA24_9CRYP)

HSP 1 Score: 121 bits (303), Expect = 1.050e-30
Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   78 NNEYVYGQEEYPG--QEMPLSTRRQKSSIPKADYNPSHQPKEEGKT-WVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            NN    G+ +YPG  Q  PLST R +SSIPK D+ P+HQ +   K  WVYPSEQ ++NA++RKG+N    DM S +A+HNAVNE+ W  V  WE++                 RLVRF GRP+D SP+A I + LLGY+ PFDR
Sbjct:    5 NNMRKGGESQYPGLNQSRPLSTARVESSIPKDDFTPAHQAENSQKERWVYPSEQMFFNAMQRKGWNPKEDDMSSVVALHNAVNEQTWNEVLRWERDLHPE---------CPQPRLVRFYGRPKDFSPRARIFS-LLGYKLPFDR 138          
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Match: K0SEF6_THAOC (Holocytochrome c-type synthase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEF6_THAOC)

HSP 1 Score: 119 bits (299), Expect = 3.070e-29
Identity = 67/135 (49.63%), Postives = 84/135 (62.22%), Query Frame = 0
Query:   90 GQEMPLSTRRQKSSIPKAD------YNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTLAIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMSPKAWINTYLLGYRPPFDR 218
            GQ MPLST+R  SSIP+ D        PSHQP      W YPSEQQ+YNA+ RKGY      +PS L IHNAVNE+ W  V++WE+     D  G+G     D RL +F GRP+D+SP+AW N+ +L  + PFDR
Sbjct:  101 GQLMPLSTQRVTSSIPRGDKPSSGIIAPSHQPANSA-NWQYPSEQQFYNAMFRKGYRPPVESIPSVLQIHNAVNERSWAEVRKWER-----DLHGNG-----DPRLAKFIGRPKDLSPRAWFNSNILMTQAPFDR 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114282.1140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L219_9PHAE7.810e-6455.77Holocytochrome c-type synthase n=1 Tax=Ectocarpus ... [more]
D8LGP6_ECTSI1.000e-5850.00Holocytochrome c-type synthase n=1 Tax=Ectocarpus ... [more]
A0A835ZPE3_9STRA2.850e-3855.47Holocytochrome c-type synthase n=1 Tax=Tribonema m... [more]
W7TBT6_9STRA3.500e-3752.56Holocytochrome c-type synthase n=2 Tax=Monodopsida... [more]
A0A7S1UN93_9STRA5.290e-3552.48Holocytochrome c-type synthase n=1 Tax=Grammatopho... [more]
A0A7S3HNG9_9STRA9.330e-3548.37Holocytochrome c-type synthase n=1 Tax=Spumella el... [more]
A0A6S9GRE1_HETAK4.630e-3243.72Holocytochrome c-type synthase n=1 Tax=Heterosigma... [more]
A0A7S4DXX3_9EUKA4.900e-3253.85Holocytochrome c-type synthase n=1 Tax=Lotharella ... [more]
A0A7S0WA24_9CRYP1.050e-3048.61Holocytochrome c-type synthase n=1 Tax=Hemiselmis ... [more]
K0SEF6_THAOC3.070e-2949.63Holocytochrome c-type synthase n=1 Tax=Thalassiosi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000511Cytochrome c/c1 haem-lyasePFAMPF01265Cyto_heme_lyasecoord: 4..218
e-value: 1.8E-33
score: 116.4
IPR000511Cytochrome c/c1 haem-lyasePANTHERPTHR12743CYTOCHROME C1 HEME LYASEcoord: 4..209
NoneNo IPR availablePANTHERPTHR12743:SF3CYTOCHROME C HEME LYASEcoord: 4..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114282contigH-elongata_contig114282:526..2026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114282.1140.1mRNA_H-elongata_contig114282.1140.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114282 526..2026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114282.1140.1 ID=prot_H-elongata_contig114282.1140.1|Name=mRNA_H-elongata_contig114282.1140.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
GGGGCPVETISRSQAGPAAAAVSSVESLSSGCPVQHDSVTNTPSGGGLAA
MLTGGSDAGQRAEDAAGRESDPAYNALNNEYVYGQEEYPGQEMPLSTRRQ
KSSIPKADYNPSHQPKEEGKTWVYPSEQQYYNAIKRKGYNASATDMPSTL
AIHNAVNEKGWEMVKEWEKERAAADGKGSGEGAVVDLRLVRFTGRPQDMS
PKAWINTYLLGYRPPFDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000511Cyt_C/C1_haem_lyase