prot_H-elongata_contig114191.1134.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: UPI001A1815EF (Uncharacterized protein n=1 Tax=Streptomyces albiflaviniger TaxID=114683 RepID=UPI001A1815EF) HSP 1 Score: 173 bits (438), Expect = 3.740e-49 Identity = 101/289 (34.95%), Postives = 154/289 (53.29%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY--PK---------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSI-ILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEIS 261
VW +V+ P + +G + VFK+K D DG + YK RLVA+GFRQ+ G+ Y+E+ SP S+R++L++ A F +E WQ+DV A+L NVE+E+Y+ PE + PK GF ++ + C+++ + G+ + +V+YVDD+L+ L CF +KDLGEASY LG I R+R+ + Q Y+ V +RF + + L GK LSK+ P T E E+MR IPY S +G++M+A TR ++S
Sbjct: 5 VWTLVDLPNDRKAVGCKWVFKKKTDADGNVTVYKARLVAKGFRQIQGVDYDETYSPVAMLKSVRILLAIAAFFDYEIWQMDVKTAFLNGNVEEELYMMQPEGFVDPKDAGKVCKLQRSIYGLKQASRSWNLRFDEVIKEVGFVQTYGEACIYKKV-SGSSIAFLVLYVDDILIIGNDIELLNSVKSYLNKCFSMKDLGEASYILGIKIYRDRSRRLIALSQSTYLDKVLKRFRMDQAKKGFLPMLQGKTLSKTQCPATADEREKMRVIPYASAIGSIMYAMLCTRPDVS 292
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A5N6PN55_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PN55_9ASTR) HSP 1 Score: 175 bits (444), Expect = 5.140e-49 Identity = 99/290 (34.14%), Postives = 166/290 (57.24%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY-PKG----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW ++E P+G + + V+K K+D +G IE+YK RLVA+G+ Q GI Y+E+ SP + S+R+V++++A F E Q+DV A+L ++ ++++++ PE + PKG F ++Q D C++ + G+ V++V+YV+D+L+AS + R L + F +KDLGEASY +G I RNR++GTL Q YI+ + +RF + + S I G + P+++AE+++MR IPY S+VG+LM+A TR +I++
Sbjct: 6 VWTLIELPRGAKAVSCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKYSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSICGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLK-MSGSKFVILVLYVNDILLASNNLGMLYDSKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSIAPVVKGDSFGSFQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAY 294
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR) HSP 1 Score: 176 bits (447), Expect = 6.690e-48 Identity = 101/290 (34.83%), Postives = 165/290 (56.90%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY-PKG----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW + E P G +G + V+K K+D +G IE+YK RLVA+G+ Q GI Y+E+ SP + S+R+V++++A F E Q+DV A+L ++ ++++++ PE + PKG F ++Q D C++ I G+ V++V+YVDD+L+AS ++ R L + F +KDLGEASY +G I RNR++GTL Q YI+ + +RF + + S + G P+++AE+++MR IPY S+VG+LM+A TR +I++
Sbjct: 141 VWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAY 429
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR) HSP 1 Score: 179 bits (454), Expect = 1.410e-47 Identity = 101/290 (34.83%), Postives = 163/290 (56.21%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY--PK---------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSI-ILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW +++ P+G +G + VFK+KID DG++ YK RLVA+GF+Q++G+ Y+E+ SP SIR++L++ A +E WQ+DV A+L N+ +++Y+ PE + PK GF +++ +PCV++ + G++V +++YVDD+L+ ++ L CF +KDLGEASY LG I R+R+ L Q YI V RF + ++ + + G LSK+ SP TD E + MR IPY S +G++M+A TR ++S+
Sbjct: 798 VWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYKKV-SGSIVSFLILYVDDILLIGNDIPTLQEIKTWLGKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGTYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSY 1086
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A5N6MC51_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MC51_9ASTR) HSP 1 Score: 176 bits (447), Expect = 1.070e-46 Identity = 101/290 (34.83%), Postives = 165/290 (56.90%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAY-PKG----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW + E P G +G + V+K K+D +G IE+YK RLVA+G+ Q GI Y+E+ SP + S+R+V++++A F E Q+DV A+L ++ ++++++ PE + PKG F ++Q D C++ I G+ V++V+YVDD+L+AS ++ R L + F +KDLGEASY +G I RNR++GTL Q YI+ + +RF + + S + G P+++AE+++MR IPY S+VG+LM+A TR +I++
Sbjct: 224 VWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAY 512
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH) HSP 1 Score: 172 bits (435), Expect = 1.710e-46 Identity = 103/290 (35.52%), Postives = 157/290 (54.14%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPK-----------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTS-IILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW++VE P+G +G + VFK K D +G IE+YK RLVA+GF Q GI Y+E+ SP + S+R++++++A F E Q+DV A+L N+E+E+++ PE + GF+ + D C++ + G+ + +++YVDD+L+AS+ + L F +KD+GEASY +G I R+R+ G L Q YI+ V ERFG+ K S I G S PQ + E + M +IPY S VG+L++A T TR +ISF
Sbjct: 48 VWELVELPEGCKRVGCKWVFKTKRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISF 336
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A438C502_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C502_VITVI) HSP 1 Score: 167 bits (423), Expect = 1.850e-46 Identity = 100/264 (37.88%), Postives = 147/264 (55.68%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPKGFQRSQADPCVFRWILHG---------AVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSIILSA-AGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW +VE P G +G + VFK K D G IE+YK RLVA+GF Q GI Y E+ SP + S+R++L+++A F E Q+DV +L +E+E+Y++ PE +P + C + ++G + V +V+YVDD+L+A+ K + + L F +KD+GEASY +G I R+R G L Q YI V ERF + S +S G + P+ D E E+M+ IPY S VG+LM+A TR +I+F
Sbjct: 25 VWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQPEGFPSS--DGEQLVCKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAF 286
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A438G5R6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G5R6_VITVI) HSP 1 Score: 166 bits (420), Expect = 2.130e-46 Identity = 103/290 (35.52%), Postives = 151/290 (52.07%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPKG-----------------------------------FQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTKTSIILSA-AGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW +VE P G +G + VFK K D G IE+YK RLVA+GF Q GI Y E+ SP + S+R++L+++A F E Q+DV A+L +E+E+Y++ PE +P F + D C++ + G+ V +V+YVDD+L+A+ K + + L F +KD+GEASY +G I R+R G L Q YI V ERF + S +S G + + P+ D E E+M+ IPY S VG+LM+A TR +I+F
Sbjct: 13 VWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPISKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFSFVENVMDQCIYLKV-SGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFWMKNCSPSVSPIVKGDRFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRLDIAF 301
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A438JRI4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JRI4_VITVI) HSP 1 Score: 165 bits (417), Expect = 6.460e-46 Identity = 99/294 (33.67%), Postives = 156/294 (53.06%), Query Frame = 0
Query: 5 TARGVWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPK-----------------------------------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVAERFGVTK-TSIILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
T GVW ++E P + + VFK K D G IE++K RLVA+GF Q I Y ++ SP + S+R++++++A F E Q+DV A+L N++++IY+E PE + K GF+ + D C++ + G+ + +++YVDD+L+AS+ + L F + D+GEA+Y +G I R+R+ G L Q + I V ERF + +S I G LSK P+ + E E+M++IPY S+VG+LM+A T TR +ISF
Sbjct: 2 THNGVWDLIELPNSCKPVNCKWVFKTKRDAKGNIERFKARLVAKGFTQKESIDYRDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENIVDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKEHLSKNFHMVDMGEANYAIGIKIFRDRSRGVLGLSQKECIDRVLERFNMQSYSSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASVVGSLMYAQTCTRPDISF 294
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Match: A0A6N2NA87_SALVM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2NA87_SALVM) HSP 1 Score: 172 bits (436), Expect = 2.700e-45 Identity = 98/266 (36.84%), Postives = 151/266 (56.77%), Query Frame = 0
Query: 9 VWQVVERPKGKMVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVNGIHYEESSSPTPAQASIRMVLSMIAAFGWEAWQLDVNMAYLEANVEKEIYVELPEAYPK----------GFQRSQADPCVFRWILHGAVVVVIVVYVDDLLVASATKRDKEQAVRDLCSCFPIKDLGEASYYLGCYITRNRNVGTLKFDQYQYIQTVA--ERFGVTKTSIILSAAGGKALSKSDSPQTDAEVEEMRQIPYRSIVGALMWAATMTRAEISF 262
VW +++ P G +G++ +FK K D DG I YK RLVA+GFRQ++GI Y+E+ SP SIR++L++ A + +E WQ+DV A+L +E+++Y+ PE + F R + DPCV++ G+ V +V+YVDD+L+ E L CF +KDLG+A Y LG I R+R+ L Q YI + R + K L G LSK P+T E+E+M+Q+PY S +G++M+A TR ++++
Sbjct: 425 VWDLIDLPDGVKPIGSKWIFKLKTDTDGNISVYKARLVAKGFRQIHGIDYDETFSPVVMIRSIRIILAIDAYYDYEIWQMDVKTAFLNGFLEEDVYMTQPEGFEDPNEAGKIKEFDFIRCEEDPCVYKKF-SGSKVAFLVLYVDDILLIGNDIPMLESVKEWLKKCFSMKDLGKAEYILGIKIYRDRSKRLLGLSQGTYIDKILIDSRCRIPKKGF-LPIQHGIYLSKKQCPKTPVELEKMKQVPYASAIGSIMYAMVCTRPDVAY 688 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114191.1134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig114191.1134.1 ID=prot_H-elongata_contig114191.1134.1|Name=mRNA_H-elongata_contig114191.1134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bpback to top |