mRNA_H-elongata_contig114167.1132.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: D8LDK8_ECTSI (Putative lipase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK8_ECTSI) HSP 1 Score: 287 bits (734), Expect = 8.790e-94 Identity = 133/219 (60.73%), Postives = 165/219 (75.34%), Query Frame = 1
Query: 1 YKTKHEAKAILAGNSECNGMGFDHFYWFEAGKRAQEHMWDATHDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEATPSMRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVPIAP-YTHVGTEIYVDR 654
YK + EAK ++ GNS +G+GFD F+WF+A + A+ +DA DTEAFVAANDDM+AVVFRGTKE+ DWATNL + C +W PD +HEGFNE V +VWE +MR+ IKNL E+GK RKLYI GHSLGGALATVAAARL Y+D +DIA +YT GSPR+F+ A+ FD+ +N G LK+KYFRCRNNND+V R+P+ P Y HVGTEIY+DR
Sbjct: 26 YKPEQEAKGLVKGNSTNDGLGFDRFHWFDADEAAKRSSFDAIQDTEAFVAANDDMVAVVFRGTKELTDWATNLDISPRDCAEQWEAPDAVGAVHEGFNEGVDSVWEVRGNMRKVIKNLYNEKGKDRKLYIAGHSLGGALATVAAARLSYIDNLDIAGVYTIGSPRLFDPSAAAGFDSRMNDGTPLKEKYFRCRNNNDIVTRIPLPPSYEHVGTEIYLDR 244
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: A0A6H5JMK4_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMK4_9PHAE) HSP 1 Score: 261 bits (666), Expect = 4.410e-82 Identity = 123/223 (55.16%), Postives = 158/223 (70.85%), Query Frame = 1
Query: 1 YKTKHEAKAILAGNSECNGMGFDHFYWFEAGKRAQEHMWDATHDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEATPS-----MRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVPIAPYTHVGTEIYVDR 654
Y ++ EA+ +L GN+ G+GFD F+WFE G+ A+++ + HDT+AFVAA+DD+IAVVFRGT IADW TN K+ KCP EW +P +H GF++AV TVW +TPS M + I +L E+GK RKL+ GHSLGGALAT AAAR+ ++D +DIA +YT GSPR+FN+ FD N G TLK+KYFRCRNN D VP VP PY HVGTEIY+D+
Sbjct: 118 YASEDEARGLLVGNATERGLGFDRFHWFEGGEEARKNPFGNLHDTDAFVAASDDIIAVVFRGTMGIADWYTNAKVQPKKCPQEWRVPPPGGTVHTGFDDAVGTVWLSTPSGQPTGMYQAIMDLYNEKGKNRKLFFAGHSLGGALATNAAARVAFIDDLDIAGIYTIGSPRLFNRVAGRHFDGRPNGGKTLKEKYFRCRNNKDPVPTVPKRPYVHVGTEIYIDK 340
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: A0A6H5KWV7_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWV7_9PHAE) HSP 1 Score: 246 bits (628), Expect = 6.570e-77 Identity = 120/223 (53.81%), Postives = 154/223 (69.06%), Query Frame = 1
Query: 1 YKTKHEAKAILAGNSECNGMGFDHFYWFEAGKRAQ-EHMWDATHDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWE---ATPS-MRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVPIAPYTHVGTEIYVDR 654
Y + E ++ + G +G+G++HF+WFEA +WD DTEAFVAANDD+I VVFRG+ E+ DW TN L++ P +W + + +H+GF++AV TVW A PS MR IK LCKEEGK RKLY+ GHSLGGALATVAAARL ++D V I+ +YT GSPRVF + +A F+ +N G +K KYFRCRNNND+V R P+ PY HVGTEIY DR
Sbjct: 84 YSPRIEVESAMQGK---DGLGYEHFHWFEADPAVSGASIWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWLLDGLGCDVHQGFDDAVETVWNPGSAHPSGMRNIIKTLCKEEGKHRKLYLAGHSLGGALATVAAARLAFMDDVKISGIYTIGSPRVFGENMADRFNAKMNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDR 303
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: A0A6H5L4H8_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4H8_9PHAE) HSP 1 Score: 226 bits (575), Expect = 2.810e-69 Identity = 113/228 (49.56%), Postives = 144/228 (63.16%), Query Frame = 1
Query: 1 YKTKHEAKAILA-----GNSECNGMGFDHFYWFEAGKRAQEHM-WDATHDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEATPS----MRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVPIAPYTHVGTEIYVDR 654
Y++K E ++ L G G D+F WFEA + +D HDTEAFVAAND I V FRG+ DW TN +L P +W + D LH GF++ V+TVW P M IK EEG+ RKLYITGHSLGGALAT+AAARL +VD +++AA+YT GSPRVF+ ++A+ FD+ N G +K KYFRCRNNND+V +P +PY HVGTE+Y DR
Sbjct: 53 YQSKDEVRSALETLSFWGKGAAAG---DNFQWFEANDEVVDRSSFDPIHDTEAFVAANDGAIVVAFRGSSGGRDWLTNFSILPRDIPKDWKLETTDGDLHRGFDDGVNTVWNPGPGHPEGMLAVIKRFYHEEGRSRKLYITGHSLGGALATIAAARLVFVDDLNVAALYTIGSPRVFDSEVAAIFDSKTNHGTRMKDKYFRCRNNNDIVSCIPPSPYKHVGTEVYFDR 277
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: D8LDL1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL1_ECTSI) HSP 1 Score: 152 bits (385), Expect = 9.660e-42 Identity = 77/128 (60.16%), Postives = 89/128 (69.53%), Query Frame = 1
Query: 118 DATHDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVW--EATPSMRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPR 495
DA HDTEAFV ANDDMI VVFRGT+E+ DW TNL + EW I LH GF++ V TVW + M +TIKNL E GK RKLYI GHSLGGALAT+AAARL +VD ++IA +YT GSPR
Sbjct: 71 DAIHDTEAFVTANDDMIVVVFRGTQELTDWTTNLNMGLRSARNEWKIDLEGCDLHRGFDDGVDTVWLPSSKNGMYQTIKNLYNEHGKSRKLYIAGHSLGGALATIAAARLSFVDDMNIAGIYTIGSPR 198
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: K9PYD0_9CYAN (Lipase class 3 n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9PYD0_9CYAN) HSP 1 Score: 131 bits (329), Expect = 8.570e-34 Identity = 81/179 (45.25%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 130 DTEAFVAANDDMIAVVFRGT-KEIADWATNLKLLQMKCPVEWNIPDVDDG-LHEGFNEAVSTVWEATPSMRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVD-KVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVP--IAPYTHVGTEIYVD 651
DT+ FVA + I V FRG+ ++IADWATN K +Q W D DDG +H GF A+ ++W+ + + I+NL + + L+ITGHSLGGALAT+AAARLH K+ + +YTFG PR+ N + A F++ LK FRC NNNDVV RVP I Y+H+G +Y D
Sbjct: 58 DTQCFVAGDRRKIIVAFRGSERKIADWATNAKAIQR----HWT-DDQDDGKVHRGFYRALDSLWD---ELEKEIRNLRTDS---QTLWITGHSLGGALATLAAARLHIDSPKIAVNGLYTFGQPRIGNNRFAKVFNSK------LKNISFRCVNNNDVVTRVPPQIFNYSHIGKLMYFD 219
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: A0A7C8FGB3_DESBX (Lipase family protein n=1 Tax=Desulfuromonadales bacterium TaxID=2099678 RepID=A0A7C8FGB3_DESBX) HSP 1 Score: 126 bits (316), Expect = 6.010e-32 Identity = 74/183 (40.44%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 118 DATHDTEAFVAANDDMIAVVFRGTK--EIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEATPSMRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVP--IAPYTHVGTEIYVDR 654
D+ DT+ F+A N MI V FRGT+ + DW T++ + Q + P+ +H GF A+ VW ++ + L + + +YITGHSLGGALAT+A A+LH K+D ++YTFG PRV N + A+ F+ K K FR NNND+VPR+P I Y+HVGT Y D
Sbjct: 52 DSQTDTQGFIAGNSAMILVAFRGTEPSHLKDWMTDMDIDQDQGPL--------GKVHCGFYRALCRVW------KDIVTYLAELRKTNQSVYITGHSLGGALATLAIAKLHAEQKIDAHSLYTFGQPRVGNMQFANNFNQ------LFKSKAFRFVNNNDIVPRIPTRIQFYSHVGTLCYFDH 214
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: UPI0016886C83 (Lipase family protein n=2 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI0016886C83) HSP 1 Score: 127 bits (318), Expect = 1.000e-31 Identity = 82/195 (42.05%), Postives = 109/195 (55.90%), Query Frame = 1
Query: 100 AQEHMWDAT---------HDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEATPSMRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVPIAP--YTHVGTEIYVD 651
AQ +W T DT+AFVAAND ++ + FRGT + DWATN+ + + E I V HEGF EA+ VW P + T+ + K + L+ITGHSLGGALAT+A ARL + K +A +YTFGSPR ++ A F+ K + FR +NNDVV RVP Y+HVGT +Y+D
Sbjct: 77 AQTKLWGFTKERVRFCEDQDTQAFVAANDQIVVLSFRGTTDRNDWATNIGVAFKE---ETKIGKV----HEGFLEALDCVW---PRVMTTLDAF---QDKNQSLWITGHSLGGALATLATARLRFGLKRPVAGLYTFGSPRAVDEAFADTFNHD------FKAQTFRLVHNNDVVTRVPPRSFGYSHVGTFLYID 252
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: K9Q1T2_9CYAN (Lipase class 3 n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9Q1T2_9CYAN) HSP 1 Score: 124 bits (310), Expect = 9.920e-31 Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 1
Query: 133 TEAFVAANDD--------MIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEAT-PSMRETIKNLCKEEGKKRK-LYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVP--IAPYTHVGTEIYVDR 654
T+AFVA ND + + FRGT E DWA NL+L + P ++ + +H GF +A VW+ P + T+K + + E KRK ++TGHSLGGALATV + + Y D YT+G PR + L FD A K +YFR +NNNDVV RVP +A Y+HVGT +Y++
Sbjct: 66 TQAFVAKNDGGGLIGSPGFVIIAFRGTDEAIDWADNLRLSSIDFPAGRDLTPLGK-IHSGFYKAFLDVWDNKGPEDQFTMKEVLEREDYKRKPFWVTGHSLGGALATVCSCQFAY-DDTPFYGTYTYGQPRACKRNLKRHFD------AEAKGRYFRFQNNNDVVSRVPQRLAGYSHVGTFVYINH 243
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Match: A0A1B1NNE9_9VIBR (Lipase_3 domain-containing protein n=3 Tax=Vibrio scophthalmi TaxID=45658 RepID=A0A1B1NNE9_9VIBR) HSP 1 Score: 122 bits (306), Expect = 3.390e-30 Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 127 HDTEAFVAANDDMIAVVFRGTKEIADWATNLKLLQMKCPVEWNIPDVDDGLHEGFNEAVSTVWEATPSMRETIKNLCKEEGKKRKLYITGHSLGGALATVAAARLHYVDKVDIAAMYTFGSPRVFNKKLASFFDTSVNCGATLKKKYFRCRNNNDVVPRVP--IAPYTHVGTEIYV 648
+ +A V + D + + FRGT E+ADW NL D+ H GF +++ VW PS+ E + L ++ K R L+ITGHSLGGA+AT+AAA+L + DK ++YTFG PR +K A F+ A K +YFR NNND+V R P + Y+H+G+ +Y+
Sbjct: 85 NSAQAAVIEHQDYLCITFRGTDELADWLDNLNAFATN--------DLFGAFHRGFWQSLEDVW---PSLNERFRYL--QQHKPRPLFITGHSLGGAMATIAAAKLVHEDK-PFTSVYTFGQPRAVTRKTARIFN------AECKSRYFRFHNNNDIVTRAPARLMGYSHIGSYLYI 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114167.1132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig114167.1132.1 >prot_H-elongata_contig114167.1132.1 ID=prot_H-elongata_contig114167.1132.1|Name=mRNA_H-elongata_contig114167.1132.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp YKTKHEAKAILAGNSECNGMGFDHFYWFEAGKRAQEHMWDATHDTEAFVAback to top mRNA from alignment at H-elongata_contig114167:539..2108- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig114167.1132.1 ID=mRNA_H-elongata_contig114167.1132.1|Name=mRNA_H-elongata_contig114167.1132.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1570bp|location=Sequence derived from alignment at H-elongata_contig114167:539..2108- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig114167:539..2108- >mRNA_H-elongata_contig114167.1132.1 ID=mRNA_H-elongata_contig114167.1132.1|Name=mRNA_H-elongata_contig114167.1132.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1320bp|location=Sequence derived from alignment at H-elongata_contig114167:539..2108- (Himanthalia elongata Himel1 dioecious)back to top |