prot_H-elongata_contig114149.1131.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114149.1131.1
Unique Nameprot_H-elongata_contig114149.1131.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.950e-58
Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D+NW NN DNG+STSSY+ ML NAP+SF+  LQGLTA STMEA+LVA+AL MKEAVFCSNM+ ELGFG+ F  +P+Y DN + LH   N ++S R KHIALR+FF++ELV E KISI+Y  TED LA++GTK+ +KHR
Sbjct:   62 DSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHR 199          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.690e-55
Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D+NW NN DNG+STSSY+ ML NAP+SF+  LQGLTA STMEA+LVA+AL MKEAVFCSNM+ ELGFG+ F  +P+Y DN + LH   N ++S R KHIALR+FF++ELV E KISI+Y  TED LA++GTK+ +KHR
Sbjct:  287 DSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHR 424          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 2.020e-53
Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D+NW NN DNG+STSSY+ ML NAP+SF+  LQGLTA STMEA+LVA+AL MKEAVFCSNM+ ELG G+ F  +P+Y DN + LH   N ++S R KHIALR+FF++ELV E KISI+YV TED LA++GTK+ +KHR
Sbjct:  508 DSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHR 645          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 2.940e-53
Identity = 89/138 (64.49%), Postives = 112/138 (81.16%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D+NW NN DNG+STSSY+ ML NAP+SF+  LQGLTA STMEA+LVA+AL MKEAVFCSNM+ ELGFG+ F  +P+Y DN + LH   N ++S R KHIALR+FF++ELV E KISI+YV+TED LA++GTK+ + HR
Sbjct:  847 DSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHR 984          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 9.500e-51
Identity = 87/138 (63.04%), Postives = 110/138 (79.71%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D+NW NN DNG+STSSY+ +L NAP+SF+  LQGLTA STMEA+LVA+AL M EAVF SNM+ ELGFG+ F  +P+Y DN + LH   N ++S R KHIALR+FF++ELV E KISI+YV TED LA++GTK+ +KHR
Sbjct: 1516 DSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHR 1653          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.320e-48
Identity = 79/138 (57.25%), Postives = 109/138 (78.99%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            ++NW NN DNG+S+S Y+ ML NAP+SFK  +QG TA STMEA+L+A+AL MKEAVFCSN++ ELG G+ F  VPLY DN + LH   N ++S R KHIALR+F+++EL+ E +ISI+Y+ T+  +A++GTK+L+KHR
Sbjct: 1017 ESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHR 1154          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.290e-48
Identity = 84/138 (60.87%), Postives = 109/138 (78.99%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D NWGNN DN +S SSYI+M+  AP+SFK  LQ LTA ST+EA+LVAAAL MKE +FC+NM+ ELGFG  F S PLYI N + LHV  N T+S R KH+ALR+F+++E+V+E +ISI+Y+ TED LA++GTK+L+K R
Sbjct:  541 DANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQR 677          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 4.030e-47
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKH 137
            D NW NN DNG+STS Y  ML +AP+S K  +QG  A STMEA+L+A+AL MKEAVFCSNM+ ELGFG+ F  VPLY DN + LH   N ++S R  HIALR+F+++ELV E +ISI+YV T+  LA++GTKYL+KH
Sbjct: 1045 DTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYLNKH 1181          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 4.000e-46
Identity = 81/138 (58.70%), Postives = 106/138 (76.81%), Query Frame = 0
Query:    1 DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            D+NWGNN DNG+STSS++ ML +AP++FK  LQ LT QSTME +LVAAAL +KEAVFCSN++ ELGFG+    VPLY DN + LH   N +YS   KHIALR+FF++ELV E +I+I+YV  +   A++GTK+L+K R
Sbjct:  570 DSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDR 707          
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 8.030e-44
Identity = 76/136 (55.88%), Postives = 106/136 (77.94%), Query Frame = 0
Query:    3 NWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAALTMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIALRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR 138
            N G+N DNG+S SSYI+M+  AP S K  LQ LTA ST+EA+LVA+AL MKE +FC+NM+ ELGFG  F S PL+ID+ + L+V  N T+S   KH+ALR+F+++++V+E +ISI+Y+ TED LA++GT+YL+K R
Sbjct:  630 NGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQR 765          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114149.1131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE2.950e-5864.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE1.690e-5564.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE2.020e-5364.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE2.940e-5364.49Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE9.500e-5163.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K129_9PHAE1.320e-4857.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE4.290e-4860.87CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JBV6_9PHAE4.030e-4759.85Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JG39_9PHAE4.000e-4658.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE8.030e-4455.88Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..118
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114149contigH-elongata_contig114149:486..899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114149.1131.1mRNA_H-elongata_contig114149.1131.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114149 486..899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114149.1131.1 ID=prot_H-elongata_contig114149.1131.1|Name=mRNA_H-elongata_contig114149.1131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
DNNWGNNRDNGRSTSSYIVMLPNAPISFKVRLQGLTAQSTMEADLVAAAL
TMKEAVFCSNMILELGFGESFGSVPLYIDNMSALHVANNHTYSPRAKHIA
LRYFFVQELVEENKISINYVKTEDQLANLGTKYLSKHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like