prot_H-elongata_contig101282.112.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101282.112.1
Unique Nameprot_H-elongata_contig101282.112.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: D7G613_ECTSI (PUB domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 2.180e-17
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 0
Query:    3 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEEGRLYMSLEVR 50
            +E+KFRSINLDNNA+KNRVA CIGG ALL+AVGFAKEE RL+MS+E R
Sbjct:  522 EEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEAR 569          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A4D9D704_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.980e-9
Identity = 27/47 (57.45%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    4 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE--EGRLYMSLE 48
            E+KFRSINL+N A+K+RVAP +GG++LL+A+GF K+  EGR +++ E
Sbjct:  510 EEKFRSINLENKAFKSRVAPVLGGSSLLKAIGFTKDDVEGRWFLAPE 556          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A835Z023_9STRA (PUB domain, zinc finger protein thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z023_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    4 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE----EGRLYMSLEVR 50
            E+K+R+I+LDN A+K R+A C+GG  LLRA+GFAK     E RL MS + R
Sbjct:  513 EEKYRAISLDNKAFKARIAGCLGGVGLLRAIGFAKADDGGEARLVMSADAR 563          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A7S4D7L7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7L7_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 1.800e-8
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MRQEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE--EGRLYM 45
            +  + KFRSIN+DNNA+  RVAP IGG ALLRA+GF K+  E RL +
Sbjct:  136 LNDDPKFRSINMDNNAFMTRVAPFIGGVALLRALGFEKDPAENRLVL 182          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A329T0H4_9STRA (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=A0A329T0H4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.660e-8
Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    3 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 50
            +EDKFR+INLDN A++ RVA  +GG A L+++G+AK+E  G L +S+E R
Sbjct:  432 EEDKFRTINLDNAAFRKRVASLVGGVAFLKSLGYAKDEADGNLKLSVENR 481          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A7S3XV98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV98_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 3.510e-8
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MRQEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE--EGRLYM 45
            +  + KFRSIN+DNNA+  RVAP IGG ALLRA+GF K+  E RL +
Sbjct:  273 LNDDPKFRSINMDNNAFMTRVAPFIGGVALLRALGFEKDPAENRLVL 319          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A8J2S6A4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6A4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.740e-8
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    3 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEEGRLYMSLEVR 50
            Q++K+R I LDN A+K RV+  +GG ALL+AVGF K+E  L ++L VR
Sbjct:  314 QDEKYRKIPLDNAAFKKRVSGLVGGIALLKAVGFVKDETHLELTLAVR 361          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: G4ZJ49_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJ49_PHYSP)

HSP 1 Score: 54.7 bits (130), Expect = 2.380e-7
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    4 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 50
            EDKFR+INL+N A++ RVA  +GG A L+A+G+ K+E  G L +S+E R
Sbjct:  437 EDKFRTINLENPAFRKRVASLVGGVAFLKALGYEKDEADGNLKLSVEKR 485          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A2D4BDJ2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDJ2_PYTIN)

HSP 1 Score: 54.3 bits (129), Expect = 3.250e-7
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    4 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 50
            EDKFRSINL+N A++ RVA  +GG A L+A+G+ K+E  G L +++E R
Sbjct:  428 EDKFRSINLENAAFRKRVASLVGGVAFLKALGYEKDEQSGMLNLAVEKR 476          
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A3R7HMX5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HMX5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.450e-7
Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    3 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 50
            +E+KFR+INL+N A++ RVA  +GG A L+++G+ K+E  G L +SLE R
Sbjct:  432 EEEKFRTINLENPAFRKRVASLVGGVAFLKSLGYEKDESDGNLKLSLEKR 481          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G613_ECTSI2.180e-1779.17PUB domain, zinc finger protein Thioredoxin n=1 Ta... [more]
A0A4D9D704_9STRA2.980e-957.45Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A835Z023_9STRA1.040e-854.90PUB domain, zinc finger protein thioredoxin n=1 Ta... [more]
A0A7S4D7L7_HETAK1.800e-859.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A329T0H4_9STRA2.660e-854.00Uncharacterized protein n=22 Tax=Phytophthora TaxI... [more]
A0A7S3XV98_HETAK3.510e-859.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2S6A4_9STRA6.740e-854.17Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
G4ZJ49_PHYSP2.380e-753.06Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A2D4BDJ2_PYTIN3.250e-753.06Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3R7HMX5_9STRA4.450e-750.00Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018997PUB domainPFAMPF09409PUBcoord: 3..39
e-value: 1.0E-10
score: 41.4
NoneNo IPR availableGENE3D1.20.58.2190coord: 1..50
e-value: 1.3E-10
score: 42.6
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 4..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101282contigH-elongata_contig101282:1979..2128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101282.112.1mRNA_H-elongata_contig101282.112.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101282 1979..2128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101282.112.1 ID=prot_H-elongata_contig101282.112.1|Name=mRNA_H-elongata_contig101282.112.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MRQEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEEGRLYMSLEVR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf