mRNA_H-elongata_contig101282.112.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: D7G613_ECTSI (PUB domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 2.180e-17 Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 1 Query: 7 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEEGRLYMSLEVR 150 +E+KFRSINLDNNA+KNRVA CIGG ALL+AVGFAKEE RL+MS+E R Sbjct: 522 EEEKFRSINLDNNAFKNRVATCIGGVALLKAVGFAKEESRLFMSMEAR 569
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A4D9D704_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.980e-9 Identity = 27/47 (57.45%), Postives = 40/47 (85.11%), Query Frame = 1 Query: 10 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE--EGRLYMSLE 144 E+KFRSINL+N A+K+RVAP +GG++LL+A+GF K+ EGR +++ E Sbjct: 510 EEKFRSINLENKAFKSRVAPVLGGSSLLKAIGFTKDDVEGRWFLAPE 556
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A835Z023_9STRA (PUB domain, zinc finger protein thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z023_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 10 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE----EGRLYMSLEVR 150 E+K+R+I+LDN A+K R+A C+GG LLRA+GFAK E RL MS + R Sbjct: 513 EEKYRAISLDNKAFKARIAGCLGGVGLLRAIGFAKADDGGEARLVMSADAR 563
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A7S4D7L7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7L7_HETAK) HSP 1 Score: 57.0 bits (136), Expect = 1.800e-8 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 1 MRQEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE--EGRLYM 135 + + KFRSIN+DNNA+ RVAP IGG ALLRA+GF K+ E RL + Sbjct: 136 LNDDPKFRSINMDNNAFMTRVAPFIGGVALLRALGFEKDPAENRLVL 182
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A329T0H4_9STRA (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=A0A329T0H4_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 2.660e-8 Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 1 Query: 7 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 150 +EDKFR+INLDN A++ RVA +GG A L+++G+AK+E G L +S+E R Sbjct: 432 EEDKFRTINLDNAAFRKRVASLVGGVAFLKSLGYAKDEADGNLKLSVENR 481
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A7S3XV98_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV98_HETAK) HSP 1 Score: 57.0 bits (136), Expect = 3.510e-8 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 1 MRQEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKE--EGRLYM 135 + + KFRSIN+DNNA+ RVAP IGG ALLRA+GF K+ E RL + Sbjct: 273 LNDDPKFRSINMDNNAFMTRVAPFIGGVALLRALGFEKDPAENRLVL 319
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A8J2S6A4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6A4_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 6.740e-8 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 7 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEEGRLYMSLEVR 150 Q++K+R I LDN A+K RV+ +GG ALL+AVGF K+E L ++L VR Sbjct: 314 QDEKYRKIPLDNAAFKKRVSGLVGGIALLKAVGFVKDETHLELTLAVR 361
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: G4ZJ49_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJ49_PHYSP) HSP 1 Score: 54.7 bits (130), Expect = 2.380e-7 Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 1 Query: 10 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 150 EDKFR+INL+N A++ RVA +GG A L+A+G+ K+E G L +S+E R Sbjct: 437 EDKFRTINLENPAFRKRVASLVGGVAFLKALGYEKDEADGNLKLSVEKR 485
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A2D4BDJ2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDJ2_PYTIN) HSP 1 Score: 54.3 bits (129), Expect = 3.250e-7 Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 1 Query: 10 EDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 150 EDKFRSINL+N A++ RVA +GG A L+A+G+ K+E G L +++E R Sbjct: 428 EDKFRSINLENAAFRKRVASLVGGVAFLKALGYEKDEQSGMLNLAVEKR 476
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Match: A0A3R7HMX5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HMX5_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 4.450e-7 Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 1 Query: 7 QEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEE--GRLYMSLEVR 150 +E+KFR+INL+N A++ RVA +GG A L+++G+ K+E G L +SLE R Sbjct: 432 EEEKFRTINLENPAFRKRVASLVGGVAFLKSLGYEKDESDGNLKLSLEKR 481 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101282.112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig101282.112.1 >prot_H-elongata_contig101282.112.1 ID=prot_H-elongata_contig101282.112.1|Name=mRNA_H-elongata_contig101282.112.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp MRQEDKFRSINLDNNAYKNRVAPCIGGTALLRAVGFAKEEGRLYMSLEVRback to top mRNA from alignment at H-elongata_contig101282:1979..2128- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig101282.112.1 ID=mRNA_H-elongata_contig101282.112.1|Name=mRNA_H-elongata_contig101282.112.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=150bp|location=Sequence derived from alignment at H-elongata_contig101282:1979..2128- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig101282:1979..2128- >mRNA_H-elongata_contig101282.112.1 ID=mRNA_H-elongata_contig101282.112.1|Name=mRNA_H-elongata_contig101282.112.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=300bp|location=Sequence derived from alignment at H-elongata_contig101282:1979..2128- (Himanthalia elongata Himel1 dioecious)back to top |