prot_H-elongata_contig113970.1110.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113970.1110.1
Unique Nameprot_H-elongata_contig113970.1110.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length188
Homology
BLAST of mRNA_H-elongata_contig113970.1110.1 vs. uniprot
Match: D8LFL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL5_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.030e-51
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 0
Query:    1 DSTVIGNAVGNGGSGGGLWVEEGATATLDGSSRLLNNSAASSYTNXXXXXXXXXXXXXXXXXSDGCVLEGNVAGPEDVGETQPACLSGEGGAIFSSGSGISLVGVILRWNRCETGALDAGCSGGAVSIIGRGPDPGITAPAPAPASDSSFAPMGAGAIFEACVFEGNEARGSVTSSVYSGAGQ 183
            DS+ + NA G GGSGGG+WVE+GA A L   ++ +NN+AASSYT+                 S+GCVLEGNVAGPEDVG + P+CLSG+GG I  SGS I+L GV LR NRCETGALDAGCSGGAVS+ GRGP    TA A A               F+ C+FEGNEARG+ T++VYSGAGQ
Sbjct:   60 DSSFVANAAGKGGSGGGIWVEDGAKAVLA-RTKFVNNTAASSYTHKGAGGGVAVSASASLTMSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQ--ATA-AVAXXXXXXXXXXXXXXAFDDCLFEGNEARGAATNNVYSGAGQ 238          
BLAST of mRNA_H-elongata_contig113970.1110.1 vs. uniprot
Match: D7FTH4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH4_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.480e-48
Identity = 103/183 (56.28%), Postives = 123/183 (67.21%), Query Frame = 0
Query:    1 DSTVIGNAVGNGGSGGGLWVEEGATATLDGSSRLLNNSAASSYTNXXXXXXXXXXXXXXXXXSDGCVLEGNVAGPEDVGETQPACLSGEGGAIFSSGSGISLVGVILRWNRCETGALDAGCSGGAVSIIGRGPDPGITAPAPAPASDSSFAPMGAGAIFEACVFEGNEARGSVTSSVYSGAGQ 183
            DS+ + NA G GGSGGG+WVE+GA A L   ++ +NN+AASSYT+                 S+GCVLEGNVAGPEDVG + P+CLSG+GG I  SGS I+L GV LR NRCETGALDAGCSGGAVS+ GRGP    TA A A               F+ C+FEGNEARG+ T++VYSGAGQ
Sbjct:  455 DSSFVANAAGKGGSGGGIWVEDGAKAVLA-RTKFVNNTAASSYTHKGAGGGVAVSASASLTMSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGPQ--ATA-AVAXXXXXXXXXXXXXXAFDDCLFEGNEARGAATNNVYSGAGQ 633          
BLAST of mRNA_H-elongata_contig113970.1110.1 vs. uniprot
Match: A0A6H5K5Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q8_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 4.490e-34
Identity = 76/121 (62.81%), Postives = 87/121 (71.90%), Query Frame = 0
Query:   63 SDGCVLEGNVAGPEDVGETQPACLSGEGGAIFSSGSGISLVGVILRWNRCETGALDAGCSGGAVSIIGRGPDPGITAPAPAPASDSSFAPMGAGAIFEACVFEGNEARGSVTSSVYSGAGQ 183
            S+GCVLEGNVAGPEDVG + P+CLSG+GG I  SGS ISL GV +R NRCETGALDAGCSGGAVS+ GRGP    TA A               A F+ C+FE NEARG+ T++VYSGAGQ
Sbjct:    2 SEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAISLSGVSMRRNRCETGALDAGCSGGAVSLTGRGPQ-ATTAVA---GXXXXXXXXXXXATFDDCLFERNEARGAATNNVYSGAGQ 118          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113970.1110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFL5_ECTSI1.030e-5156.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTH4_ECTSI1.480e-4856.28Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K5Q8_9PHAE4.490e-3462.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113970contigH-elongata_contig113970:228..1670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113970.1110.1mRNA_H-elongata_contig113970.1110.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113970 228..1670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113970.1110.1 ID=prot_H-elongata_contig113970.1110.1|Name=mRNA_H-elongata_contig113970.1110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
DSTVIGNAVGNGGSGGGLWVEEGATATLDGSSRLLNNSAASSYTNRGAGG
GLAVSSSARITLSDGCVLEGNVAGPEDVGETQPACLSGEGGAIFSSGSGI
SLVGVILRWNRCETGALDAGCSGGAVSIIGRGPDPGITAPAPAPASDSSF
APMGAGAIFEACVFEGNEARGSVTSSVYSGAGQVRQT*
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