prot_H-elongata_contig113885.1105.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113885.1105.1
Unique Nameprot_H-elongata_contig113885.1105.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: D7G7G0_ECTSI (Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G0_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.050e-22
Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLCLLGK 71
            EG  SQ+NACLVKVA +VSKD   P L  AA IYEKLGRSC+EKKLL MNAKGYWLQ GLCLL +
Sbjct:  152 EGCVSQSNACLVKVAGIVSKDAENPNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQAGLCLLAQ 216          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S4TA13_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TA13_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.230e-12
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLC 67
            E S SQ+N C  KVA + S  ++PP L RAA +YE+LGR CLE  LL+ NAKGY+LQ+ +C
Sbjct:  193 ENSKSQSNMCRAKVAELCSAALDPPDLLRAAQLYEELGRHCLETNLLKFNAKGYFLQSVMC 253          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S2WGN8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WGN8_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.970e-12
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:   11 SQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLCLLG 70
            SQA+ C  KVA ++S  M+PP L RAA IYE LG+ CL+  LL+ NAKGY+LQ  LC LG
Sbjct:  163 SQASTCKAKVAELLSAAMDPPDLIRAAEIYEDLGKQCLDNNLLKYNAKGYFLQAILCHLG 222          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S2IBT3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBT3_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.040e-12
Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLC 67
            E + SQ+N C  KVA + S  ++PP L RAA +YE+LGR CLE  LL+ NAKGY+LQ+ +C
Sbjct:  166 ENAKSQSNTCRAKVAELCSAALDPPDLLRAAQLYEELGRHCLETNLLKFNAKGYFLQSVMC 226          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S1YCT5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YCT5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.610e-11
Identity = 30/63 (47.62%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    5 QSEGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLC 67
            ++E S +Q + C+VK+A + S +++PP L RAA +Y+ LGRS L+  +L+ +AKGY+LQT LC
Sbjct:  158 EAENSPAQKSTCIVKIAELCSAELDPPDLLRAAGLYDSLGRSSLDSNMLKFHAKGYFLQTILC 220          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S2UGK7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGK7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.700e-11
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLCLLG 70
            E S  QA +C+ KVA + S  ++PP+L RAA IY++LGR CLE  +L+ NAK Y+LQ   C LG
Sbjct:  164 EDSKGQAASCMTKVAELCSAALDPPELLRAAKIYDELGRRCLESNMLKFNAKMYFLQAIFCHLG 227          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S1CZ61_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ61_CYCTE)

HSP 1 Score: 65.5 bits (158), Expect = 7.260e-11
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLCLLGK 71
            E +  QA+ CL KVA + S  ++PP L RAA +Y+ LGR CL+  LL+ NAKGY+LQ   C L +
Sbjct:  172 EDANGQASQCLAKVAELCSVVLDPPDLTRAAQLYDDLGRRCLDSNLLKFNAKGYFLQAIFCHLAQ 236          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: B7G602_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G602_PHATC)

HSP 1 Score: 65.1 bits (157), Expect = 9.580e-11
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLC 67
            E S SQA+ C  KVA + S  ++PP L RAA +Y++LGR+CL+  LL+ NAK Y+LQ  LC
Sbjct:  162 EDSKSQASQCRAKVAELCSAALDPPDLLRAAGLYDELGRACLDSNLLKYNAKSYFLQAILC 222          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: A0A7S0A1I6_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A1I6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.870e-10
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    7 EGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLC 67
            E S S  + CL KVA + S  ++PP L +AA IYE LG  CLE  LL+ NAK Y+LQ+  C
Sbjct:   48 EDSKSAQSQCLAKVAELYSAALDPPDLFKAASIYETLGTQCLESNLLKYNAKAYFLQSVFC 108          
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Match: B8C7V6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7V6_THAPS)

HSP 1 Score: 59.3 bits (142), Expect = 1.140e-8
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   16 CLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEKKLLQMNAKGYWLQTGLC 67
            CL KVA + S  +NPP+L RAA IYE LGR CLE  LL+ NAK ++L   +C
Sbjct:  163 CLQKVAELSSGALNPPELLRAAEIYENLGRQCLESNLLKYNAKSHFLNGVMC 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113885.1105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G7G0_ECTSI1.050e-2273.85Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A7S4TA13_9STRA1.230e-1255.74Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S2WGN8_9STRA1.970e-1258.33Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2IBT3_9STRA2.040e-1254.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1YCT5_9STRA2.610e-1147.62Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2UGK7_9STRA3.700e-1151.56Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1CZ61_CYCTE7.260e-1149.23Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7G602_PHATC9.580e-1152.46Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0A1I6_9STRA6.870e-1050.82Hypothetical protein n=1 Tax=Rhizosolenia setigera... [more]
B8C7V6_THAPS1.140e-855.77Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14938SNAPcoord: 5..69
e-value: 5.2E-15
score: 55.6
NoneNo IPR availablePANTHERPTHR13768:SF8ALPHA-SOLUBLE NSF ATTACHMENT PROTEINcoord: 5..70
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..71
e-value: 3.3E-14
score: 54.7
IPR000744NSF attachment proteinPANTHERPTHR13768SOLUBLE NSF ATTACHMENT PROTEIN SNAPcoord: 5..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113885contigH-elongata_contig113885:230..1245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113885.1105.1mRNA_H-elongata_contig113885.1105.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113885 230..1263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113885.1105.1 ID=prot_H-elongata_contig113885.1105.1|Name=mRNA_H-elongata_contig113885.1105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MVFAQSEGSTSQANACLVKVAAMVSKDMNPPQLGRAAVIYEKLGRSCLEK
KLLQMNAKGYWLQTGLCLLGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR000744NSF_attach