mRNA_H-elongata_contig113802.1102.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: D7FKC9_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC9_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.030e-14 Identity = 32/50 (64.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query: 73 TNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFK 222
TNHYAV+G+ DF+ GS+ +R+YHRLAL WHPDRQV+A+E + +AED FK
Sbjct: 3 TNHYAVMGIQDFARGSEAKRAYHRLALVWHPDRQVNASEQRKTEAEDVFK 52
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A812TDS1_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812TDS1_SYMMI) HSP 1 Score: 56.2 bits (134), Expect = 2.590e-7 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 QQLGSSIYIMVRAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
QQ+ + +R REA S N YA+LGL SDV++ +H+LALQ HPD+ +E +K AE +FK + + V
Sbjct: 777 QQISQDLAAWLRRAREAVHRKD-SRNFYAILGLRCDCDSSDVKKRFHKLALQCHPDKVHSTSEVLKKSAEARFKAIQEAYEV 857
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A1Q9CC58_SYMMI (DnaJ-like subfamily C member 7-like n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CC58_SYMMI) HSP 1 Score: 56.2 bits (134), Expect = 2.610e-7 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 QQLGSSIYIMVRAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
QQ+ + +R REA S N YA+LGL SDV++ +H+LALQ HPD+ +E +K AE +FK + + V
Sbjct: 971 QQISQDLAAWLRRAREAVHRKD-SRNFYAILGLRCDCDSSDVKKRFHKLALQCHPDKVHSTSEVLKKSAEARFKAIQEAYEV 1051
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A2G6PJ11_9BACT (J domain-containing protein n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A2G6PJ11_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 3.600e-7 Identity = 24/51 (47.06%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 70 STNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFK 222
S ++Y VLGL + +VRR+Y +LA+QWHPDR + ED +++A +KFK
Sbjct: 197 SVDYYGVLGLSSDASDDEVRRTYRKLAMQWHPDRFSTSPEDKQREASEKFK 247
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A812NFV3_9DINO (Dnajc7 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812NFV3_9DINO) HSP 1 Score: 55.5 bits (132), Expect = 4.770e-7 Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 QQLGSSIYIMVRAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
QQL + +R REA S N YA+LGL S+V++ +H+LALQ HPD+ +E +K AE +FK + + V
Sbjct: 546 QQLSQDLAAWLRRAREAVHRKD-SRNFYAILGLRCDCDSSEVKKRFHKLALQCHPDKVHSTSEVLKKSAEARFKAIQEAYEV 626
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A8C4UKX2_FALTI (J domain-containing protein n=4 Tax=Falco TaxID=8952 RepID=A0A8C4UKX2_FALTI) HSP 1 Score: 50.1 bits (118), Expect = 2.070e-6 Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 76 NHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
++Y VLGL + DV++SYH+LAL+WHPD+ R++AE KFK ++V
Sbjct: 3 DYYKVLGLQKSASQDDVKKSYHKLALKWHPDKNP----SNREEAEKKFKAVGEAYKV 55
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A812RW61_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812RW61_SYMPI) HSP 1 Score: 53.5 bits (127), Expect = 2.070e-6 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 1 QQLGSSIYIMVRAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
QQ + + +R REA S + YA+LGL +DVR+S+H+LALQ HPD+ +E +K AE +FK + + V
Sbjct: 219 QQSLQDLAMWLRRAREAVRRND-SRSFYAILGLRCDCDAADVRKSFHKLALQCHPDKVHSTSEVLKKSAEARFKAIQEAYEV 299
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A2I0LVP9_COLLI (DnaJ (Hsp40) homolog, subfamily B, member 8 n=4 Tax=Columbidae TaxID=8930 RepID=A0A2I0LVP9_COLLI) HSP 1 Score: 52.8 bits (125), Expect = 2.680e-6 Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 76 NHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKV 225
NHY VLGL + D+++SYH+LAL+WHPD+ + E+ AE KFK
Sbjct: 2 NHYKVLGLQKNASQDDIKKSYHKLALKWHPDKNPNNKEE----AEKKFKA 47
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A1Q9E9A6_SYMMI (DnaJ-like subfamily C member 7 n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E9A6_SYMMI) HSP 1 Score: 53.1 bits (126), Expect = 3.150e-6 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 34 RAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
RA R A P N+YAVLG+ + +D++++Y RLAL+WHPD+ V TE+ A KFK + F V
Sbjct: 738 RALRWAARPP--QKNYYAVLGVSFNATQADIKKAYRRLALKWHPDKNVDRTEE----ASQKFKALQEAFEV 802
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Match: A0A813CH25_9DINO (DNAJC7 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CH25_9DINO) HSP 1 Score: 53.1 bits (126), Expect = 3.200e-6 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 34 RAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVHATEDCRKDAEDKFKVRRGVFRV 246
RA R A P N+YAVLG+ + +D++++Y RLAL+WHPD+ V TE+ A KFK + F V
Sbjct: 668 RALRWAARPP--QKNYYAVLGVSFNATQADIKKAYRRLALKWHPDKNVDRTEE----ASQKFKALQEAFEV 732 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113802.1102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig113802.1102.1 >prot_H-elongata_contig113802.1102.1 ID=prot_H-elongata_contig113802.1102.1|Name=mRNA_H-elongata_contig113802.1102.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp MVRAKREATPGPPWSTNHYAVLGLHDFSPGSDVRRSYHRLALQWHPDRQVback to top mRNA from alignment at H-elongata_contig113802:838..1083+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig113802.1102.1 ID=mRNA_H-elongata_contig113802.1102.1|Name=mRNA_H-elongata_contig113802.1102.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=246bp|location=Sequence derived from alignment at H-elongata_contig113802:838..1083+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig113802:838..1083+ >mRNA_H-elongata_contig113802.1102.1 ID=mRNA_H-elongata_contig113802.1102.1|Name=mRNA_H-elongata_contig113802.1102.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=438bp|location=Sequence derived from alignment at H-elongata_contig113802:838..1083+ (Himanthalia elongata Himel1 dioecious)back to top |