prot_H-elongata_contig11377.1101.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11377.1101.1
Unique Nameprot_H-elongata_contig11377.1101.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length329
Homology
BLAST of mRNA_H-elongata_contig11377.1101.1 vs. uniprot
Match: A0A6H5KVI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI4_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.010e-56
Identity = 147/292 (50.34%), Postives = 179/292 (61.30%), Query Frame = 0
Query:   43 KLFGAAKGGAD---GAVGKRNPEADDLMARFQRGGGELDMSEVASATEGADWEAGEEGGAQGSFDVDTLEGALVSDMEEGDEXXXXXXXXXXXXQNNKEDGGAPKRSLEDLLWGHETRSSGEGFDQSLEGQVEAMHDLLKADLGVSLDEGREGLDASRFGAALRNDRGETSSSSWGEA---KTIAELIVASGGKLSQLGGGGVDNEAETSSLLSSSEDGDSDGENLLWGCSSREEEHDQLVSYVSLGCFDPTSRLQSLMIMSTGQRLRMARDALAERLKVLVAKSALSQLGD 328
            +LF    G A+   GA      E DDLM RFQRGGGELD+S++   +   D+E        G+ + D   G    D E       XXXXXXXXX    E G A  + L DLLWGHE   S +GFD SLE QVEAM+D LKA L VSL+E R G DA+ FGA  +   G+     WG A   KTIA+++          GG            + SS++GD +G+  LWGC+S +EE +QLVS+ SLGCFDP++RLQSLM+MSTG+RLRMARDALAERLKVLVAKSALSQLGD
Sbjct:  246 ELFDNVTGSAEEFEGAGSASGAEVDDLMERFQRGGGELDLSQLGGGSSNGDYERQISVSIAGAAE-DIAAGWQAEDDE-------XXXXXXXXXXXXXESGKA--KGLGDLLWGHEAYES-DGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATAKKTGGDRP---WGAASGPKTIADVVAXXXXXXXXXGG-----------EMPSSDEGDGEGQ-YLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKVLVAKSALSQLGD 511          
BLAST of mRNA_H-elongata_contig11377.1101.1 vs. uniprot
Match: D8LHT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT1_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 5.100e-44
Identity = 119/252 (47.22%), Postives = 152/252 (60.32%), Query Frame = 0
Query:   67 MARFQRGGGELDMSEVASATEGADWEAGEEGGAQGSFDVDTLEGALVSDMEEGDEXXXXXXXXXXXXQNNKEDGGAPKRSLEDLLWGHETRSSGEGFDQSLEGQVEAMHDLLKADLGVSLDEGREGLDASRFGAALRNDRGETSSSSWGEA---KTIAELIVASGGKLSQLGGGGVDNEAETSSLLSSSEDGDSDGENLLWGCSSREEEHDQLVSYVSLGCFDPTSRLQSLMIMSTGQRLRMARDALAERLK 315
            M RFQRGGGELD+S++   +   D+E            V ++ GA   D+  G E   XXXXXXXXX       G   + L DLLWGHE   S +GFD SLE QVEAM++ LKA L VSL+E R G DA+ FGAA +   G+     WG A   +TIA+++                        +  S++GD +G+  LWGC+S +EE +QLVS+ SLGCFDP++RLQSLM+MSTG+RLRMARDALAERLK
Sbjct:    1 MERFQRGGGELDLSQLGGGSSNGDYER--------RLSV-SIAGA-AEDIVAGWEAEDXXXXXXXXXXXXXXXXGGKAKGLGDLLWGHEAYES-DGFDSSLEDQVEAMYECLKAHLTVSLEENRGGADAAAFGAAAKKTGGDRP---WGAASGPQTIADVVXXXXXXXXXXXX-----------EVPPSDEGDGEGQ-YLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLK 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11377.1101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVI4_9PHAE1.010e-5650.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT1_ECTSI5.100e-4447.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11377contigH-elongata_contig11377:3162..5506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11377.1101.1mRNA_H-elongata_contig11377.1101.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11377 2031..7765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11377.1101.1 ID=prot_H-elongata_contig11377.1101.1|Name=mRNA_H-elongata_contig11377.1101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp
MAASGVGEGRISGLGDGSGRSLPSRKRRARRSRSGSDGDDPDKLFGAAKG
GADGAVGKRNPEADDLMARFQRGGGELDMSEVASATEGADWEAGEEGGAQ
GSFDVDTLEGALVSDMEEGDEDDDDQDEEGGKGQNNKEDGGAPKRSLEDL
LWGHETRSSGEGFDQSLEGQVEAMHDLLKADLGVSLDEGREGLDASRFGA
ALRNDRGETSSSSWGEAKTIAELIVASGGKLSQLGGGGVDNEAETSSLLS
SSEDGDSDGENLLWGCSSREEEHDQLVSYVSLGCFDPTSRLQSLMIMSTG
QRLRMARDALAERLKVLVAKSALSQLGD*
back to top