prot_H-elongata_contig113696.1093.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig113696.1093.1
Unique Nameprot_H-elongata_contig113696.1093.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: D7FMN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN9_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 6.210e-35
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQAE 66
            RARAVWIYTLLACLEKPLGSETAALVREILRRCC+QRAEVE+PLDDNLPALN+I AITGRFFQQAE
Sbjct:  243 RARAVWIYTLLACLEKPLGSETAALVREILRRCCSQRAEVESPLDDNLPALNIITAITGRFFQQAE 308          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: A0A6H5K160_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K160_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.220e-34
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQAE 66
            RARAVWIYTLLACLEKPLGSETAALVREILRRCC+QRAEVE+PLDDNLPALN+I AITGRFFQQAE
Sbjct:  331 RARAVWIYTLLACLEKPLGSETAALVREILRRCCSQRAEVESPLDDNLPALNIIAAITGRFFQQAE 396          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: M4C4K0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4K0_HYAAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.180e-14
Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVW+Y L+A L+KP+ +  AA +R+ILRRC   R E+ETP +  L +LNV++ ITG FF Q
Sbjct:  190 RARAVWMYALMARLDKPVHAAVAATIRQILRRCWTLRCELETPSEVQLKSLNVLIVITGDFFGQ 253          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: A0A662WVK0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVK0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.090e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVWIY LLA L+KP+ +  AA +R++LRRC   R E+E P +  L ALNV+V I G FF Q
Sbjct:  191 RARAVWIYALLARLDKPVHAGVAATIRQLLRRCWTLRCELEAPSEQQLKALNVLVVIAGDFFGQ 254          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: H3GMA3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMA3_PHYRM)

HSP 1 Score: 73.2 bits (178), Expect = 6.020e-14
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVWIY LLA L+KP+ +  AA +R+ILRRC   R E+E P +  L +LN+++ I+G FF Q
Sbjct:  191 RARAVWIYALLARLDKPVHASVAATIRQILRRCWTLRCELEAPTEIQLKSLNILIVISGDFFGQ 254          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: A0A225WKV8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WKV8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.100e-14
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVWIY LLA L+KP+ +  AA +R++LRRC A R E+ET     L ALN+++ +TG FF Q
Sbjct:  192 RARAVWIYALLARLDKPVHASVAATIRQLLRRCWALRCELETLSQIQLKALNILIVVTGDFFGQ 255          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: G4YNM5_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YNM5_PHYSP)

HSP 1 Score: 72.8 bits (177), Expect = 8.510e-14
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVWIY LLA L+KP+ +  AA +R+ILRRC   R+E+E P +  L +LN+++ I G FF Q
Sbjct:  192 RARAVWIYALLARLDKPVHANVAATIRQILRRCWTLRSELEAPSEVQLKSLNILIVIAGDFFGQ 255          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: W2QYQ9_PHYPN (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2QYQ9_PHYPN)

HSP 1 Score: 72.4 bits (176), Expect = 1.170e-13
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVWIY LLA L+KP+ +  AA +R+ILRRC   R+E+E P +  L +LN+++ I G FF Q
Sbjct:  191 RARAVWIYALLARLDKPVHASVAATIRQILRRCWTLRSELEAPPEIQLKSLNILIVIAGDFFGQ 254          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: D0MWF2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MWF2_PHYIT)

HSP 1 Score: 72.0 bits (175), Expect = 1.640e-13
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            RARAVWIY LLA L+KP+ +  AA +R+ILRRC   R E+E P +  L +LN+++ I G FF Q
Sbjct:  191 RARAVWIYALLARLDKPVHASVAATIRQILRRCWTLRCELEKPSEMQLKSLNILIVIAGDFFGQ 254          
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Match: E3TF03_ICTPU (Gem-associated protein 2 n=6 Tax=Siluroidei TaxID=1489793 RepID=E3TF03_ICTPU)

HSP 1 Score: 71.6 bits (174), Expect = 2.210e-13
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    6 WIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPALNVIVAITGRFFQQ 64
            W+Y LLACLEKPL  E  +L+R++ RRC A RA +E   D+ LPALN+++ I  R+F+Q
Sbjct:  191 WLYALLACLEKPLLPEAHSLIRQLARRCSAVRAHLENKDDERLPALNLMICIVARYFEQ 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig113696.1093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMN9_ECTSI6.210e-3593.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K160_9PHAE3.220e-3493.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
M4C4K0_HYAAE2.180e-1454.69Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A662WVK0_9STRA3.090e-1456.25Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
H3GMA3_PHYRM6.020e-1453.13Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A225WKV8_9STRA6.100e-1454.69Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
G4YNM5_PHYSP8.510e-1453.13Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
W2QYQ9_PHYPN1.170e-1353.13Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
D0MWF2_PHYIT1.640e-1353.13Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
E3TF03_ICTPU2.210e-1352.54Gem-associated protein 2 n=6 Tax=Siluroidei TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035426Gemin2/Brr1PFAMPF04938SIP1coord: 3..64
e-value: 6.6E-20
score: 71.8
NoneNo IPR availableGENE3D1.20.58.1070coord: 1..68
e-value: 1.7E-21
score: 79.0
NoneNo IPR availablePANTHERPTHR12794GEMIN2coord: 2..66
NoneNo IPR availablePANTHERPTHR12794:SF0GEM-ASSOCIATED PROTEIN 2coord: 2..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig113696contigH-elongata_contig113696:328..1142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig113696.1093.1mRNA_H-elongata_contig113696.1093.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig113696 328..1142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig113696.1093.1 ID=prot_H-elongata_contig113696.1093.1|Name=mRNA_H-elongata_contig113696.1093.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
RARAVWIYTLLACLEKPLGSETAALVREILRRCCAQRAEVETPLDDNLPA
LNVIVAITGRFFQQAEAVY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035426Gemin2/Brr1